EWM21449.1, cds9214 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21449.1 vs. NCBI_GenBank
Match: gi|585101679|gb|EWM21449.1| (pak1ip1 protein [Nannochloropsis gaditana]) HSP 1 Score: 885.56 bits (2287), Expect = 0.000e+0 Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = 0
Query: 1 MIRFLIQDWRKDSFLYPCEDMAVRKRLIGAYVHVPFSQIFAYTPHQGSVRSLAIPQGGVKAGSLLVSGGVDEHIRMYDLRKRAEVGELLHHKGTITALGFVGSSHLLSGSEDGAVCIWRVYDWSLLHILGGHKGAITAVAIHPSGKLALSSGRDRSLRLWDLVRGRCAYITKLEAVVETVKWSGDGSVYALQVGDRRLEVRRASDNKPTAIATHPARVTAIAFLPAAAAAPCADEAKSLEISAAIEQQAPMHHVVTACDDGMLRVVDGDTGSVLSCTETGPHCGRIKEAVVWGNRALPFWQQSRELVTASSDGKILVWRVGPAGTQVEVGPGAALGAGVRITCLAAYAAGEAVDEGRASSGTSLGKNKKKRKRVRGEETKEANMGPDRAAPRKGETARKSKGNRHRSANRGSGMQSNGAPSRGKSRAQASSRANV 435
MIRFLIQDWRKDSFLYPCEDMAVRKRLIGAYVHVPFSQIFAYTPHQGSVRSLAIPQGGVKAGSLLVSGGVDEHIRMYDLRKRAEVGELLHHKGTITALGFVGSSHLLSGSEDGAVCIWRVYDWSLLHILGGHKGAITAVAIHPSGKLALSSGRDRSLRLWDLVRGRCAYITKLEAVVETVKWSGDGSVYALQVGDRRLEVRRASDNKPTAIATHPARVTAIAFLPAAAAAPCADEAKSLEISAAIEQQAPMHHVVTACDDGMLRVVDGDTGSVLSCTETGPHCGRIKEAVVWGNRALPFWQQSRELVTASSDGKILVWRVGPAGTQVEVGPGAALGAGVRITCLAAYAAGEAVDEGRASSGTSLGKNKKKRKRVRGEETKEANMGPDRAAPRKGETARKSKGNRHRSANRGSGMQSNGAPSRGKSRAQASSRANV
Sbjct: 1 MIRFLIQDWRKDSFLYPCEDMAVRKRLIGAYVHVPFSQIFAYTPHQGSVRSLAIPQGGVKAGSLLVSGGVDEHIRMYDLRKRAEVGELLHHKGTITALGFVGSSHLLSGSEDGAVCIWRVYDWSLLHILGGHKGAITAVAIHPSGKLALSSGRDRSLRLWDLVRGRCAYITKLEAVVETVKWSGDGSVYALQVGDRRLEVRRASDNKPTAIATHPARVTAIAFLPAAAAAPCADEAKSLEISAAIEQQAPMHHVVTACDDGMLRVVDGDTGSVLSCTETGPHCGRIKEAVVWGNRALPFWQQSRELVTASSDGKILVWRVGPAGTQVEVGPGAALGAGVRITCLAAYAAGEAVDEGRASSGTSLGKNKKKRKRVRGEETKEANMGPDRAAPRKGETARKSKGNRHRSANRGSGMQSNGAPSRGKSRAQASSRANV 435
BLAST of EWM21449.1 vs. NCBI_GenBank
Match: gi|553181783|ref|XP_005853625.1| (hypothetical protein NGA_0430201 [Nannochloropsis gaditana CCMP526] >gi|422295437|gb|EKU22736.1| hypothetical protein NGA_0430201 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 800.431 bits (2066), Expect = 0.000e+0 Identity = 397/400 (99.25%), Postives = 397/400 (99.25%), Query Frame = 0
Query: 36 FSQIFAYTPHQGSVRSLAIPQGGVKAGSLLVSGGVDEHIRMYDLRKRAEVGELLHHKGTITALGFVGSSHLLSGSEDGAVCIWRVYDWSLLHILGGHKGAITAVAIHPSGKLALSSGRDRSLRLWDLVRGRCAYITKLEAVVETVKWSGDGSVYALQVGDRRLEVRRASDNKPTAIATHPARVTAIAFLPAAAAAPCADEAKSLEISAAIEQQAPMHHVVTACDDGMLRVVDGDTGSVLSCTETGPHCGRIKEAVVWGNRALPFWQQSRELVTASSDGKILVWRVGPAGTQVEVGPGAALGAGVRITCLAAYAAGEAVDEGRASSGTSLGKNKKKRKRVRGEETKEANMGPDRAAPRKGETARKSKGNRHRSANRGSGMQSNGAPSRGKSRAQASSRANV 435
IFAYTPHQGSVRSLAIPQGGVKAGSLLVSGGVDEHIRMYDLRKRAEVGELLHHKGTITALGFVGSSHLLSGSEDGAVCIWRVYDWSLLHILGGHKGAITAVAIHPSGKLALSSGRDRSLRLWDLVRGRCAYITKLEAVVETVKWSGDGSVYALQVGDRRLEVRRASDNKPTAIATHPARVTAIAFLPAAAAAPCADEAKSLEISAAIEQQAPMHHVVTACDDGMLRVVDGDTGSVLSCTETGPHCGRIKEAVVWGNRALPFWQQSRELVTASSDGKILVWRVGPAGTQVEVGPGAALGAGVRITCLAAYAAGEAVDEGRASSGTSLGKNKKKRKRVRGEETKEANMGPDRAAPRKGETARKSKGNRHRSANRGSGMQSNGAPSRGKSRAQASSRANV
Sbjct: 53 LKMIFAYTPHQGSVRSLAIPQGGVKAGSLLVSGGVDEHIRMYDLRKRAEVGELLHHKGTITALGFVGSSHLLSGSEDGAVCIWRVYDWSLLHILGGHKGAITAVAIHPSGKLALSSGRDRSLRLWDLVRGRCAYITKLEAVVETVKWSGDGSVYALQVGDRRLEVRRASDNKPTAIATHPARVTAIAFLPAAAAAPCADEAKSLEISAAIEQQAPMHHVVTACDDGMLRVVDGDTGSVLSCTETGPHCGRIKEAVVWGNRALPFWQQSRELVTASSDGKILVWRVGPAGTQVEVGPGAALGAGVRITCLAAYAAGEAVDEGRASSGTSLGKNKKKRKRVRGEETKEANMGPDRAAPRKGETARKSKGNRHRSANRGSGMQSNGAPSRGKSRAQASSRANV 452
BLAST of EWM21449.1 vs. NCBI_GenBank
Match: gi|298712701|emb|CBJ48726.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 208.764 bits (530), Expect = 1.404e-58 Identity = 98/185 (52.97%), Postives = 130/185 (70.27%), Query Frame = 0
Query: 39 IFAYTPHQGSVRSLAIPQGGVKAGSLLVSGGVDEHIRMYDLRKRAEVGELLHHKGTITALGFVGSSHLLSGSEDGAVCIWRVYDWSLLHILGGHKGAITAVAIHPSGKLALSSGRDRSLRLWDLVRGRCAYITKLEAVVETVKWSGDGSVYALQVGDRRLEVRRASDNKPTAIATHPARVTAIAF 223
+F Y H G ++S+AI G +AG LLV+GG DE +R+YDLR R E+GEL H GTIT + F S+HLL+GSED VCIWRV+DW+LLH+LGGHK A+T+++IHPSG++ALS RDR+LRLW+L+ GRCAYI +L+ E VKWS G Y + VG + V A+ ++ H ARV + F
Sbjct: 68 VFGYNVHVGCMKSVAIATSGSRAGQLLVTGGADERVRIYDLRDRTELGELQQHNGTITCMEFYKSTHLLTGSEDHTVCIWRVHDWALLHVLGGHKAAVTSLSIHPSGRMALSVSRDRTLRLWNLLEGRCAYIKRLQGEGELVKWSPAGDSYLVVVGS-TVSVYSAATSEAVGECRHDARVNSACF 251
BLAST of EWM21449.1 vs. NCBI_GenBank
Match: gi|1214706882|gb|OWZ18359.1| (P21-activated protein kinase-interacting protein [Phytophthora megakarya]) HSP 1 Score: 185.652 bits (470), Expect = 9.713e-51 Identity = 121/349 (34.67%), Postives = 172/349 (49.28%), Query Frame = 0
Query: 40 FAYTPHQGSVRSLAIPQGGVKAGSLLVSGGVDEHIRMYDLRKRAEVGELLHHKGTITALGFVGSSHLLSGSEDGAVCIWRVYDWSLLHILGGHKGAITAVAIHPSGKLALSSGRDRSLRLWDLVRGRCAYITKLEAVVETVKWSGDGSVYALQVGDRRLEVRRASDNKPTAIATHPARVTAIAFLPAAAAAPCADEAKSLEISAAIEQQAPMHHVVTACDDGML--RVVDGDTGSVLSCTE-TGPHCGRIKEAVVWGNRALPFWQQSRELVTASSDGKILVWRV--------GPAGTQVEVGPGAA--LGAGVRITCLAAYAAGEAVDE-GRASSGTSLGKNKKKRKRV 374
F Y H ++S+A+ G K G L+SGG DE I++Y++ KR EVG L+ G IT+L F G SH+LSGS D ++CIWR DW+ LHILGGHKG I ++A+HPSGKL S RDR+LR+W+LV+GR A+I +LE E V S G+ YAL G + L V + + HP ++ F D+ H+ +G L +V D + + C + PH G LP+ +V A+SDG +W P + V P A+ L R+TCL+ A E + E G++ + K KK K++
Sbjct: 33 FGYAAHSECIKSVALM--GAKQGKTLLSGGSDEMIKIYNVDKRVEVGSLMEQHGAITSLEFFGQSHVLSGSADNSICIWRTSDWNCLHILGGHKGEINSIAVHPSGKLCFSVARDRTLRMWNLVKGRIAFIRRLEKEAELVMISQKGTNYALGFG-KDLSVFNM-NAELVGTLEHPKKIHCAVFATDEYIVCGGDDK----------------HIYIWKTNGTLVGKVTHKDVDARIRCLQVVFPH----------GEDKLPW------IVLATSDGTFQIWDFASFTLDASAPQESNKAVKPMASTVLLTKPRVTCLSVCVASEMIAEGGKSKTAAQNVKQTKKNKKL 345
BLAST of EWM21449.1 vs. NCBI_GenBank
Match: gi|635365167|emb|CCI46438.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 181.415 bits (459), Expect = 2.454e-49 Identity = 122/338 (36.09%), Postives = 163/338 (48.22%), Query Frame = 0
Query: 40 FAYTPHQGSVRSLAIPQGGVKAGSLLVSGGVDEHIRMYDLRKRAEVGELLHHKGTITALGFVGSSHLLSGSEDGAVCIWRVYDWSLLHILGGHKGAITAVAIHPSGKLALSSGRDRSLRLWDLVRGRCAYITKLEAVVETVKWSGDGSVYALQVGDRRLEVRRASDNKPTAIATHPARVTAIAFLPAAAAAPCADEAKSLEISAAIEQQAPMHHVVTACDDGML--RVVDGDTGSVLSCTETGPHCGRIKEAVVWGNRALPFWQQSRELVTASSDGKILVWRVG--------PAGTQVEVGPGAA--LGAGVRITCLAAYAA--GEAVDEGRASSGTS 363
F Y+ H V+S + + G +L+SG DE I++YD+ KR EVG L+ G+IT L F +H+LS S D VCIWRV DW+ LHILGGHK I ++ IHPSGKLA S RD++LR+W+LV GRCAYI +LE E VK S G Y L G + + SD + HP RV A F CA E K L + DG L +V D + + C + I + V + LP +V A+S+G + +W + P V P A + RITCL A A+ + D+ S TS
Sbjct: 18 FGYSAHSECVKSAVFMKS--RNGKILLSGSSDETIKIYDVDKRVEVGTLMEQSGSITCLEFFQQTHVLSASTDKTVCIWRVSDWNCLHILGGHKEEINSITIHPSGKLAFSVARDQTLRMWNLVNGRCAYIRRLEKEAEIVKISTLGKRYLLTFG-SVVSIFSTSDAELVGTLKHPKRVHACVFATDDLVV-CAGEDKHLYVWNV---------------DGTLLAKVTHPDLTARIRCIDV------IDQEV---SSDLPI------IVLATSNGTVQIWDLNDLQLDSDSPFELNESVQPSATTKILNAPRITCLTACASSQNDTADQPENSEMTS 321
BLAST of EWM21449.1 vs. NCBI_GenBank
Match: gi|919057493|ref|XP_013410593.1| (PREDICTED: p21-activated protein kinase-interacting protein 1-like [Lingula anatina]) HSP 1 Score: 179.489 bits (454), Expect = 1.031e-48 Identity = 109/317 (34.38%), Postives = 161/317 (50.79%), Query Frame = 0
Query: 36 FSQIFAYTPHQGSVRSLAIPQGGVKAGSLLVSGGVDEHIRMYDLRKRAEVGELLHHKGTITALGFVGSSHLLSGSEDGAVCIWRVYDWSLLHILGGHKGAITAVAIHPSGKLALSSGRDRSLRLWDLVRGRCAYITKLEAVVETVKWSGDGSVYALQVGDRRLEVRRASDNKPTAIATHPARVTAIAFLPAAAAAPCADEAKSLEISAAIEQQAPMHHVVTACDDGMLRVVDGDTGSVLSCTETGPHCGRIKEAVVWGNRALPFWQQSRE--LVTASSDGKILVWRVGPAGTQVEVGPGAALGAGV----RITCLAA 346
F Q+F H G VR +AI + +L +G DE I+++DL K+ E+G L+ H+GTIT+L F SHL SGSEDG +CIW+ W + L GHKG + +V++HPSGKLALS G+D++LR W+L+ GR A+IT ++ V E+V WS DG +YA+ V R+++ T RV + F+ + ++ D G+ ++ D D S + TG + RIK + Q + + +VTASSDG I W++ +V P L V R+TCL
Sbjct: 26 FQQMFTDHSHCGGVRDVAISKK-----KILATGSSDETIKLFDLDKKVELGSLMEHEGTITSLSFYEDSHLFSGSEDGKICIWKTSGWDCIKTLKGHKGPVLSVSVHPSGKLALSVGKDKTLRTWNLITGRAAFITNIKEVAESVHWSPDGGLYAV-VFPNRVDIYNVEKAAITDSICCEFRVQVVTFMQT-------------------------NWLIVGGDQGVFQICDLDKKSKVCTMNTGTN--RIK--------GIGCCQMAGDTCIVTASSDGFIKAWKLSK-----DVPPACELLTEVNTKFRLTCLTV 296
BLAST of EWM21449.1 vs. NCBI_GenBank
Match: gi|635365166|emb|CCI46437.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 180.259 bits (456), Expect = 1.085e-48 Identity = 122/338 (36.09%), Postives = 163/338 (48.22%), Query Frame = 0
Query: 40 FAYTPHQGSVRSLAIPQGGVKAGSLLVSGGVDEHIRMYDLRKRAEVGELLHHKGTITALGFVGSSHLLSGSEDGAVCIWRVYDWSLLHILGGHKGAITAVAIHPSGKLALSSGRDRSLRLWDLVRGRCAYITKLEAVVETVKWSGDGSVYALQVGDRRLEVRRASDNKPTAIATHPARVTAIAFLPAAAAAPCADEAKSLEISAAIEQQAPMHHVVTACDDGML--RVVDGDTGSVLSCTETGPHCGRIKEAVVWGNRALPFWQQSRELVTASSDGKILVWRVG--------PAGTQVEVGPGAA--LGAGVRITCLAAYAA--GEAVDEGRASSGTS 363
F Y+ H V+S + + G +L+SG DE I++YD+ KR EVG L+ G+IT L F +H+LS S D VCIWRV DW+ LHILGGHK I ++ IHPSGKLA S RD++LR+W+LV GRCAYI +LE E VK S G Y L G + + SD + HP RV A F CA E K L + DG L +V D + + C + I + V + LP +V A+S+G + +W + P V P A + RITCL A A+ + D+ S TS
Sbjct: 38 FGYSAHSECVKSAVFMKS--RNGKILLSGSSDETIKIYDVDKRVEVGTLMEQSGSITCLEFFQQTHVLSASTDKTVCIWRVSDWNCLHILGGHKEEINSITIHPSGKLAFSVARDQTLRMWNLVNGRCAYIRRLEKEAEIVKISTLGKRYLLTFG-SVVSIFSTSDAELVGTLKHPKRVHACVFATDDLVV-CAGEDKHLYVWNV---------------DGTLLAKVTHPDLTARIRCIDV------IDQEV---SSDLPI------IVLATSNGTVQIWDLNDLQLDSDSPFELNESVQPSATTKILNAPRITCLTACASSQNDTADQPENSEMTS 341
BLAST of EWM21449.1 vs. NCBI_GenBank
Match: gi|919057495|ref|XP_013410594.1| (PREDICTED: p21-activated protein kinase-interacting protein 1-like [Lingula anatina]) HSP 1 Score: 179.489 bits (454), Expect = 1.212e-48 Identity = 109/317 (34.38%), Postives = 162/317 (51.10%), Query Frame = 0
Query: 36 FSQIFAYTPHQGSVRSLAIPQGGVKAGSLLVSGGVDEHIRMYDLRKRAEVGELLHHKGTITALGFVGSSHLLSGSEDGAVCIWRVYDWSLLHILGGHKGAITAVAIHPSGKLALSSGRDRSLRLWDLVRGRCAYITKLEAVVETVKWSGDGSVYALQVGDRRLEVRRASDNKPTAIATHPARVTAIAFLPAAAAAPCADEAKSLEISAAIEQQAPMHHVVTACDDGMLRVVDGDTGSVLSCTETGPHCGRIKEAVVWGNRALPFWQQSRE--LVTASSDGKILVWRVGPAGTQVEVGPGAALGAGV----RITCLAA 346
F Q+F H G VR +AI + + L +G DE I+++DL K+ E+G L+ H+GTIT+L F SHL SGSEDG +CIW+ W + L GHKG + +V++HPSGKLALS G+D++LR W+L+ GR A+IT ++ V E+V WS DG +YA+ V R+++ T RV + F+ + + ++ D G+ ++ D D S + TG + RIK + Q + + +VTASSDG I W++ +V P L V R+TCL
Sbjct: 26 FQQMFTDHSHCGGVRDVAISKKKI-----LATGSSDETIKLFDLDKKVELGSLMEHEGTITSLSFYEDSHLFSGSEDGKICIWKTSGWDCIKTLKGHKGPVLSVSVHPSGKLALSVGKDKTLRTWNLITGRAAFITNIKEVAESVHWSPDGGLYAV-VFPNRVDIYDVEKAAITDSICCEFRVQVVTFMQS-------------------------NWLIVGGDQGIFQICDLDKKSKVCTMNTGTN--RIK--------GIGCCQMAGDTCIVTASSDGFIKAWKLSK-----DVPPACELLTEVNTKFRLTCLTV 296
BLAST of EWM21449.1 vs. NCBI_GenBank
Match: gi|962000778|ref|XP_014876257.1| (PREDICTED: p21-activated protein kinase-interacting protein 1 [Poecilia latipinna]) HSP 1 Score: 178.718 bits (452), Expect = 1.836e-48 Identity = 112/346 (32.37%), Postives = 180/346 (52.02%), Query Frame = 0
Query: 40 FAYTPHQGSVRSLAIPQGGVKAGSLLVSGGVDEHIRMYDLRKRAEVGELLHHKGTITALGFVGSSHLLSGSEDGAVCIWRVYDWSLLHILGGHKGAITAVAIHPSGKLALSSGRDRSLRLWDLVRGRCAYITKLEAVVETVKWSGDGSVYALQVGDRRLEVRRASDNKPTAIATHPARVTAIAFLPAAAAAPCADEAKSLEISAAIEQQAPMHHVVTACDDGMLRVVDGDTGSVLSCTETGPHCGRIK--EAVVWGNRALPFWQQSRELVTASSDGKILVWRVGPAGTQVEVGPGAALG---AGVRITCLAAY--AAGEAVDEGRASSGTS--LGKNKKKRKRVRG 376
F + H SV ++A + +V+G DE I++YD++KR E G LLHH+GTIT L F GSSHLLSG EDG +C+W W + + HKG +T++++HPSGKLALS G D++LR W+L+ GR A+I ++ V+WS DG Y + V D ++++ + T T+P R++++ FL + A A DD +R D + + E H R+K ++++ + + L+TAS+DG I +W++ + E+ P LG R+TCLA + ++ + + +G + + TS L + K+KR R
Sbjct: 34 FTHHAHTASVSAVAASE------RFVVTGSKDETIQLYDMKKRTEHGALLHHEGTITCLEFYGSSHLLSGGEDGFLCVWSTKKWECMTTIKAHKGHVTSLSVHPSGKLALSVGTDKTLRTWNLINGRSAFIKNIKQNAHIVRWSPDGDRYVVVVDD-KIDIYKLETASVTGTITNPKRISSVKFLNNSVLA-------------------------VAGDDDTVRFCDVEKAKWVC--EFKAHETRVKAVDSLIVDDYCV--------LLTASNDGYIKMWKL---HLKEELEPPVLLGEVNTTARLTCLAVWRPSSVQPISDGPSKAATSEELAQELAKKKRGRA 334
BLAST of EWM21449.1 vs. NCBI_GenBank
Match: gi|617447691|ref|XP_007567454.1| (PREDICTED: p21-activated protein kinase-interacting protein 1 [Poecilia formosa]) HSP 1 Score: 177.948 bits (450), Expect = 3.074e-48 Identity = 112/346 (32.37%), Postives = 180/346 (52.02%), Query Frame = 0
Query: 40 FAYTPHQGSVRSLAIPQGGVKAGSLLVSGGVDEHIRMYDLRKRAEVGELLHHKGTITALGFVGSSHLLSGSEDGAVCIWRVYDWSLLHILGGHKGAITAVAIHPSGKLALSSGRDRSLRLWDLVRGRCAYITKLEAVVETVKWSGDGSVYALQVGDRRLEVRRASDNKPTAIATHPARVTAIAFLPAAAAAPCADEAKSLEISAAIEQQAPMHHVVTACDDGMLRVVDGDTGSVLSCTETGPHCGRIK--EAVVWGNRALPFWQQSRELVTASSDGKILVWRVGPAGTQVEVGPGAALG---AGVRITCLAAY--AAGEAVDEGRASSGTS--LGKNKKKRKRVRG 376
F + H SV ++A + +V+G DE I++YD++KR E G LLHH+GTIT L F GSSHLLSG EDG +C+W W + + HKG +T++++HPSGKLALS G D++LR W+L+ GR A+I ++ V+WS DG Y + V D ++++ + T T+P R++++ FL + A A DD +R D + + E H R+K ++++ + + L+TAS+DG I +W++ + E+ P LG R+TCLA + ++ + + +G + + TS L + K+KR R
Sbjct: 34 FTHHAHTASVSAVAASE------RFVVTGSKDETIQLYDMKKRTEHGALLHHEGTITCLEFYGSSHLLSGGEDGLLCVWSTKKWECMTTIKAHKGHVTSLSVHPSGKLALSVGTDKTLRTWNLINGRSAFIKNIKQNAHIVRWSPDGDRYVVVVDD-KIDIYKLETASVTGTITNPKRISSVKFLNNSVLA-------------------------IAGDDETVRFCDVEKAKWVC--EFKAHETRVKAVDSLIVDDYCV--------LLTASNDGYIKMWKL---HLKEELEPPVLLGEVNTTARLTCLAVWRPSSVQPISDGPSKAATSEELAQELAKKKRGRA 334 The following BLAST results are available for this feature:
BLAST of EWM21449.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|