EWM21503.1, cds9205 (CDS) Nannochloropsis gaditana

Overview
NameEWM21503.1
Unique Namecds9205
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:172452..173909 -

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Properties
Property NameValue
Protein idEWM21503.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100019g37.525.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:172452..173909 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21503.1 vs. NCBI_GenBank
Match: gi|585101733|gb|EWM21503.1| (hypothetical protein Naga_100019g37 [Nannochloropsis gaditana])

HSP 1 Score: 996.112 bits (2574), Expect = 0.000e+0
Identity = 485/485 (100.00%), Postives = 485/485 (100.00%), Query Frame = 0 
Query:    1 MSSQNGLFMLLPRGPVWRSEDVKSMVGFMDEFNRRADEADSLQLLETFNFIVEAVGIDACVEALDQVKKQQQIQLSQQAPFRCGSKSTSAPKEGTSMDAVGGPQAHEVMQSITHSHAGGKGQGPPTAVAASEATMATNGTGANHEWSDAGVVAATVLHTVTPGESKPPCLSISQLDKGAALPGTATQQGEASSYIGSESSTAATATTSVSSSPSAGDRPFPMLQPATLSWAGVPPVPSSVSSLPDSAARVPMDPVSYPFGSVTGQLPFHSGRNGGDAVDEMGAARSEPSLFGQPPRRSLSTSVPIEATASQGLVSTLEEDGYIPTPRNDGPWHYLGTLPESNASSTSASGRRGTEKLTGAGSGALPSTNSVSSAGSDDDGKHRPAAMNFGRYGDHLPYNGRKICRVKNCDGNQRWPDYLCGQHGGGRCRWEGCSLFHQGINSMGLLLCGKHCKAVGATYRRPRPAAQKTERGNGGGFGSTTRKRR 485
            MSSQNGLFMLLPRGPVWRSEDVKSMVGFMDEFNRRADEADSLQLLETFNFIVEAVGIDACVEALDQVKKQQQIQLSQQAPFRCGSKSTSAPKEGTSMDAVGGPQAHEVMQSITHSHAGGKGQGPPTAVAASEATMATNGTGANHEWSDAGVVAATVLHTVTPGESKPPCLSISQLDKGAALPGTATQQGEASSYIGSESSTAATATTSVSSSPSAGDRPFPMLQPATLSWAGVPPVPSSVSSLPDSAARVPMDPVSYPFGSVTGQLPFHSGRNGGDAVDEMGAARSEPSLFGQPPRRSLSTSVPIEATASQGLVSTLEEDGYIPTPRNDGPWHYLGTLPESNASSTSASGRRGTEKLTGAGSGALPSTNSVSSAGSDDDGKHRPAAMNFGRYGDHLPYNGRKICRVKNCDGNQRWPDYLCGQHGGGRCRWEGCSLFHQGINSMGLLLCGKHCKAVGATYRRPRPAAQKTERGNGGGFGSTTRKRR
Sbjct:    1 MSSQNGLFMLLPRGPVWRSEDVKSMVGFMDEFNRRADEADSLQLLETFNFIVEAVGIDACVEALDQVKKQQQIQLSQQAPFRCGSKSTSAPKEGTSMDAVGGPQAHEVMQSITHSHAGGKGQGPPTAVAASEATMATNGTGANHEWSDAGVVAATVLHTVTPGESKPPCLSISQLDKGAALPGTATQQGEASSYIGSESSTAATATTSVSSSPSAGDRPFPMLQPATLSWAGVPPVPSSVSSLPDSAARVPMDPVSYPFGSVTGQLPFHSGRNGGDAVDEMGAARSEPSLFGQPPRRSLSTSVPIEATASQGLVSTLEEDGYIPTPRNDGPWHYLGTLPESNASSTSASGRRGTEKLTGAGSGALPSTNSVSSAGSDDDGKHRPAAMNFGRYGDHLPYNGRKICRVKNCDGNQRWPDYLCGQHGGGRCRWEGCSLFHQGINSMGLLLCGKHCKAVGATYRRPRPAAQKTERGNGGGFGSTTRKRR 485
[Close]
BLAST of EWM21503.1 vs. NCBI_GenBank
Match: gi|585107316|gb|EWM25545.1| (hypothetical protein Naga_100130g15, partial [Nannochloropsis gaditana])

HSP 1 Score: 77.411 bits (189), Expect = 1.323e-11
Identity = 37/89 (41.57%), Postives = 43/89 (48.31%), Query Frame = 0 
Query:  393 GDHLPYNGRKICRVKNCDGNQRWPDYLCGQHGGGRCRW----------------------EGCSLFHQGINSMGLLLCGKHCKAVGATY 459
            G HLP  GR +CR+  C    RWPDY C  HGGGRC++                        C  FHQ  NS G LLCG+HC+  GA Y
Sbjct:  371 GLHLPDRGRHVCRIAGCGNEYRWPDYQCKLHGGGRCQYLWWLRGRGEGGRGEGPDGVGLVLACPKFHQSKNSKGELLCGEHCRLTGAVY 459
The following BLAST results are available for this feature:
BLAST of EWM21503.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585101733|gb|EWM21503.1|0.000e+0100.00hypothetical protein Naga_100019g37 [Nannochlorops... [more]
gi|585107316|gb|EWM25545.1|1.323e-1141.57hypothetical protein Naga_100130g15, partial [Nann... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9235rna9235Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications