EWM21441.1, cds9194 (CDS) Nannochloropsis gaditana

Overview
NameEWM21441.1
Unique Namecds9194
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:139638..140324 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21441.1
Productnudix hydrolase
Orig transcript idgnl|cribi|Naga_100019g47.463.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:139638..140324 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR020084NUDIX_hydrolase_CS
IPR015797NUDIX_hydrolase_dom-like
IPR000086NUDIX_hydrolase_dom
Homology
BLAST of EWM21441.1 vs. NCBI_GenBank
Match: gi|585101670|gb|EWM21440.1| (nudix hydrolase [Nannochloropsis gaditana] >gi|585101671|gb|EWM21441.1| nudix hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 473.396 bits (1217), Expect = 5.537e-169
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
Query:    1 MDALIEAFVCASQKVGHAQSQQNVQCCPQASASSLTTPSSFGGSFVRNDAMAYNRSRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPEVMKEREKWTRMTTIVTNYLFPFVLLHLLVSITGGCRGIFLSAQPHHVPITWPTHMSRFALV 228
            MDALIEAFVCASQKVGHAQSQQNVQCCPQASASSLTTPSSFGGSFVRNDAMAYNRSRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPEVMKEREKWTRMTTIVTNYLFPFVLLHLLVSITGGCRGIFLSAQPHHVPITWPTHMSRFALV
Sbjct:    1 MDALIEAFVCASQKVGHAQSQQNVQCCPQASASSLTTPSSFGGSFVRNDAMAYNRSRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPEVMKEREKWTRMTTIVTNYLFPFVLLHLLVSITGGCRGIFLSAQPHHVPITWPTHMSRFALV 228          
BLAST of EWM21441.1 vs. NCBI_GenBank
Match: gi|553196123|ref|XP_005856275.1| (nudix hydrolase, partial [Nannochloropsis gaditana CCMP526] >gi|422292789|gb|EKU20091.1| nudix hydrolase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 444.506 bits (1142), Expect = 7.149e-158
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
Query:   15 VGHAQSQQNVQCCPQASASSLTTPSSFGGSFVRNDAMAYNRSRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPEVMKEREKWTRMTTIVTNYLFPFVLLHLLVSITGGCRGIFLSAQPHHVPITWPTHMSRFALV 228
            VGHAQSQQNVQCCPQASASSLTTPSSFGGSFVRNDAMAYNRSRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPEVMKEREKWTRMTTIVTNYLFPFVLLHLLVSITGGCRGIFLSAQPHHVPITWPTHMSRFALV
Sbjct:    1 VGHAQSQQNVQCCPQASASSLTTPSSFGGSFVRNDAMAYNRSRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPEVMKEREKWTRMTTIVTNYLFPFVLLHLLVSITGGCRGIFLSAQPHHVPITWPTHMSRFALV 214          
BLAST of EWM21441.1 vs. NCBI_GenBank
Match: gi|760443915|ref|XP_011399026.1| (Nudix hydrolase 15, mitochondrial [Auxenochlorella protothecoides] >gi|675353690|gb|KFM26130.1| Nudix hydrolase 15, mitochondrial [Auxenochlorella protothecoides])

HSP 1 Score: 113.235 bits (282), Expect = 3.678e-27
Identity = 61/126 (48.41%), Postives = 81/126 (64.29%), Query Frame = 0
Query:   46 VRNDAMAYNRSRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGE-DVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPEVMK 170
            V N   A   + A  PV+   AAVL+PLFE+    + H +LT R + +R+H GEVCFPGGK ++G+ D V+ A+REA EE+GL P  VRVLG + P LS HL  VTPV+A IP      PNP+ ++
Sbjct:   19 VANLCRAVANAGACQPVSARHAAVLVPLFEDPATRRTHVVLTQRAAGLRSHGGEVCFPGGKREEGDADDVATAVREAQEELGLDPNSVRVLGCLGPVLSKHLLSVTPVLATIPARHAFHPNPDEVQ 144          
BLAST of EWM21441.1 vs. NCBI_GenBank
Match: gi|970457766|ref|WP_058737974.1| (coenzyme A pyrophosphatase [Novosphingobium barchaimii] >gi|968274747|gb|KTR82045.1| NUDIX hydrolase [Novosphingobium barchaimii])

HSP 1 Score: 107.842 bits (268), Expect = 1.969e-25
Identity = 63/149 (42.28%), Postives = 83/149 (55.70%), Query Frame = 0
Query:   53 YNRSRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNP-----------EVMKEREKWTRMTTIVTNYLFPFV 190
            +   R T   +   AAVL+ + E    G    L   RPS MRAH G++ FPGG+LD GE  V AALREAWEE+G+AP+ VRV+GT     +   YE+TPV+AVIPPD    PNP           + + +RE   + T  V   + PF+
Sbjct:   24 WTDPRITKFESFRPAAVLMAMTERERPG---FLFLHRPSTMRAHPGQIAFPGGRLDPGETAVEAALREAWEELGIAPRDVRVIGTTDIYRTGTGYEITPVLAVIPPDLEIVPNPAEVAQWFEAPVDFVLDRENQVQKTIEVGGKVHPFI 169          
BLAST of EWM21441.1 vs. NCBI_GenBank
Match: gi|552840107|ref|XP_005849966.1| (hypothetical protein CHLNCDRAFT_17375, partial [Chlorella variabilis] >gi|307109626|gb|EFN57864.1| hypothetical protein CHLNCDRAFT_17375, partial [Chlorella variabilis])

HSP 1 Score: 106.301 bits (264), Expect = 4.064e-25
Identity = 55/108 (50.93%), Postives = 69/108 (63.89%), Query Frame = 0
Query:   67 AAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGE-DVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPEVMKERE 173
            AAVL+PLFE+   G++H +L  R S +  H+GEVCFPGGK D  + D ++ ALREA EE+ L P  VRV+  + P LS HL  VTPVV VIPP     PNP   +  E
Sbjct:    3 AAVLVPLFEDPASGEVHVVLNQRSSKLNTHSGEVCFPGGKRDPADADDIATALREAQEELSLDPAAVRVVACLPPFLSKHLLSVTPVVGVIPPHLRFSPNPSEARGEE 110          
BLAST of EWM21441.1 vs. NCBI_GenBank
Match: gi|1180501960|ref|WP_084001906.1| (CoA pyrophosphatase [Altererythrobacter dongtanensis])

HSP 1 Score: 105.916 bits (263), Expect = 5.315e-25
Identity = 57/106 (53.77%), Postives = 71/106 (66.98%), Query Frame = 0
Query:   61 PVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNP 166
            P  L  AAVLI + E  + G    LLT RP  MR+HAG+  FPGGK+D GED V AALREA EE+G+ P+ VRV+G   P  +   Y+VTPV+AV+PPD   +PNP
Sbjct:    4 PDLLRPAAVLIAVTERSDPG---VLLTHRPETMRSHAGQAAFPGGKIDPGEDAVEAALREAHEELGIDPRDVRVIGPSDPFRTRTGYDVTPVLAVVPPDLPIRPNP 106          
BLAST of EWM21441.1 vs. NCBI_GenBank
Match: gi|1049199907|gb|ANY20105.1| (putative NUDIX hydrolase [Altererythrobacter dongtanensis])

HSP 1 Score: 106.301 bits (264), Expect = 7.280e-25
Identity = 61/119 (51.26%), Postives = 75/119 (63.03%), Query Frame = 0
Query:   48 NDAMAYNRSRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNP 166
             DAMA        P  L  AAVLI + E  + G    LLT RP  MR+HAG+  FPGGK+D GED V AALREA EE+G+ P+ VRV+G   P  +   Y+VTPV+AV+PPD   +PNP
Sbjct:   24 TDAMA-------PPDLLRPAAVLIAVTERSDPG---VLLTHRPETMRSHAGQAAFPGGKIDPGEDAVEAALREAHEELGIDPRDVRVIGPSDPFRTRTGYDVTPVLAVVPPDLPIRPNP 132          
BLAST of EWM21441.1 vs. NCBI_GenBank
Match: gi|951527268|ref|WP_057883811.1| (coenzyme A pyrophosphatase [Altererythrobacter troitsensis])

HSP 1 Score: 103.99 bits (258), Expect = 4.588e-24
Identity = 56/107 (52.34%), Postives = 71/107 (66.36%), Query Frame = 0
Query:   61 PVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPE 167
            P  L  AAVLI + E  E G    L+T RP  MR+HAG+  FPGGK+D GED + AALREA EE+G+ P+ VRV+G   P  +   Y+VTPV+AV+PPD    PNP+
Sbjct:   30 PDLLRPAAVLIAVTERGEPG---VLVTHRPETMRSHAGQAAFPGGKIDPGEDAIEAALREAHEELGIHPRDVRVIGASDPFRTRTGYDVTPVLAVVPPDLPIVPNPD 133          
BLAST of EWM21441.1 vs. NCBI_GenBank
Match: gi|1010966428|ref|WP_061925476.1| (coenzyme A pyrophosphatase [Altererythrobacter epoxidivorans] >gi|927350040|gb|ALE17051.1| hypothetical protein AMC99_01761 [Altererythrobacter epoxidivorans])

HSP 1 Score: 102.064 bits (253), Expect = 2.645e-23
Identity = 59/132 (44.70%), Postives = 74/132 (56.06%), Query Frame = 0
Query:   56 SRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPEVMK-----------EREKWT 176
            SR        +AAVLI + E  E G    LLT RP  MR H G+V FPGGK+D GED V AALREA EE+ L P  VR++GT     +   ++VTPV+ V+PPD    PNP+ ++            RE WT
Sbjct:   27 SRFAEAGRATEAAVLIAVTERDEPG---LLLTQRPRDMRDHPGQVAFPGGKIDPGEDAVQAALREAHEEIALDPSQVRIIGTTDRYQTGTGFDVTPVLGVVPPDLDLTPNPDEVEAWFEVPLSLVLRRENWT 155          
BLAST of EWM21441.1 vs. NCBI_GenBank
Match: gi|528897144|gb|EPZ36845.1| (NUDIX hydrolase-like domain-containing protein [Rozella allomycis CSF55])

HSP 1 Score: 102.449 bits (254), Expect = 4.229e-23
Identity = 57/109 (52.29%), Postives = 75/109 (68.81%), Query Frame = 0
Query:   61 PVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGE-DVVSAALREAWEEVGL-APKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPE 167
            P ++ +AAVLIPLF + +D  ++ LLTVR S +++HAGEVC PGGK D  + D +  ALREA EE+GL A  V +VLG + PTLS     V PVVA+I  DFV + NP+
Sbjct:   20 PNSVTRAAVLIPLFVHEDD--LYVLLTVRSSKLKSHAGEVCLPGGKKDPSDSDDIETALREANEEIGLEARDVSKVLGLINPTLSKAYIYVQPVVAIIKDDFVPKNNPK 126          
The following BLAST results are available for this feature:
BLAST of EWM21441.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101670|gb|EWM21440.1|5.537e-169100.00nudix hydrolase [Nannochloropsis gaditana] >gi|585... [more]
gi|553196123|ref|XP_005856275.1|7.149e-158100.00nudix hydrolase, partial [Nannochloropsis gaditana... [more]
gi|760443915|ref|XP_011399026.1|3.678e-2748.41Nudix hydrolase 15, mitochondrial [Auxenochlorella... [more]
gi|970457766|ref|WP_058737974.1|1.969e-2542.28coenzyme A pyrophosphatase [Novosphingobium barcha... [more]
gi|552840107|ref|XP_005849966.1|4.064e-2550.93hypothetical protein CHLNCDRAFT_17375, partial [Ch... [more]
gi|1180501960|ref|WP_084001906.1|5.315e-2553.77CoA pyrophosphatase [Altererythrobacter dongtanens... [more]
gi|1049199907|gb|ANY20105.1|7.280e-2551.26putative NUDIX hydrolase [Altererythrobacter dongt... [more]
gi|951527268|ref|WP_057883811.1|4.588e-2452.34coenzyme A pyrophosphatase [Altererythrobacter tro... [more]
gi|1010966428|ref|WP_061925476.1|2.645e-2344.70coenzyme A pyrophosphatase [Altererythrobacter epo... [more]
gi|528897144|gb|EPZ36845.1|4.229e-2352.29NUDIX hydrolase-like domain-containing protein [Ro... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9224rna9224Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications