EWM21441.1, cds9194 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21441.1 vs. NCBI_GenBank
Match: gi|585101670|gb|EWM21440.1| (nudix hydrolase [Nannochloropsis gaditana] >gi|585101671|gb|EWM21441.1| nudix hydrolase [Nannochloropsis gaditana]) HSP 1 Score: 473.396 bits (1217), Expect = 5.537e-169 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
Query: 1 MDALIEAFVCASQKVGHAQSQQNVQCCPQASASSLTTPSSFGGSFVRNDAMAYNRSRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPEVMKEREKWTRMTTIVTNYLFPFVLLHLLVSITGGCRGIFLSAQPHHVPITWPTHMSRFALV 228
MDALIEAFVCASQKVGHAQSQQNVQCCPQASASSLTTPSSFGGSFVRNDAMAYNRSRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPEVMKEREKWTRMTTIVTNYLFPFVLLHLLVSITGGCRGIFLSAQPHHVPITWPTHMSRFALV
Sbjct: 1 MDALIEAFVCASQKVGHAQSQQNVQCCPQASASSLTTPSSFGGSFVRNDAMAYNRSRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPEVMKEREKWTRMTTIVTNYLFPFVLLHLLVSITGGCRGIFLSAQPHHVPITWPTHMSRFALV 228
BLAST of EWM21441.1 vs. NCBI_GenBank
Match: gi|553196123|ref|XP_005856275.1| (nudix hydrolase, partial [Nannochloropsis gaditana CCMP526] >gi|422292789|gb|EKU20091.1| nudix hydrolase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 444.506 bits (1142), Expect = 7.149e-158 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
Query: 15 VGHAQSQQNVQCCPQASASSLTTPSSFGGSFVRNDAMAYNRSRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPEVMKEREKWTRMTTIVTNYLFPFVLLHLLVSITGGCRGIFLSAQPHHVPITWPTHMSRFALV 228
VGHAQSQQNVQCCPQASASSLTTPSSFGGSFVRNDAMAYNRSRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPEVMKEREKWTRMTTIVTNYLFPFVLLHLLVSITGGCRGIFLSAQPHHVPITWPTHMSRFALV
Sbjct: 1 VGHAQSQQNVQCCPQASASSLTTPSSFGGSFVRNDAMAYNRSRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPEVMKEREKWTRMTTIVTNYLFPFVLLHLLVSITGGCRGIFLSAQPHHVPITWPTHMSRFALV 214
BLAST of EWM21441.1 vs. NCBI_GenBank
Match: gi|760443915|ref|XP_011399026.1| (Nudix hydrolase 15, mitochondrial [Auxenochlorella protothecoides] >gi|675353690|gb|KFM26130.1| Nudix hydrolase 15, mitochondrial [Auxenochlorella protothecoides]) HSP 1 Score: 113.235 bits (282), Expect = 3.678e-27 Identity = 61/126 (48.41%), Postives = 81/126 (64.29%), Query Frame = 0
Query: 46 VRNDAMAYNRSRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGE-DVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPEVMK 170
V N A + A PV+ AAVL+PLFE+ + H +LT R + +R+H GEVCFPGGK ++G+ D V+ A+REA EE+GL P VRVLG + P LS HL VTPV+A IP PNP+ ++
Sbjct: 19 VANLCRAVANAGACQPVSARHAAVLVPLFEDPATRRTHVVLTQRAAGLRSHGGEVCFPGGKREEGDADDVATAVREAQEELGLDPNSVRVLGCLGPVLSKHLLSVTPVLATIPARHAFHPNPDEVQ 144
BLAST of EWM21441.1 vs. NCBI_GenBank
Match: gi|970457766|ref|WP_058737974.1| (coenzyme A pyrophosphatase [Novosphingobium barchaimii] >gi|968274747|gb|KTR82045.1| NUDIX hydrolase [Novosphingobium barchaimii]) HSP 1 Score: 107.842 bits (268), Expect = 1.969e-25 Identity = 63/149 (42.28%), Postives = 83/149 (55.70%), Query Frame = 0
Query: 53 YNRSRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNP-----------EVMKEREKWTRMTTIVTNYLFPFV 190
+ R T + AAVL+ + E G L RPS MRAH G++ FPGG+LD GE V AALREAWEE+G+AP+ VRV+GT + YE+TPV+AVIPPD PNP + + +RE + T V + PF+
Sbjct: 24 WTDPRITKFESFRPAAVLMAMTERERPG---FLFLHRPSTMRAHPGQIAFPGGRLDPGETAVEAALREAWEELGIAPRDVRVIGTTDIYRTGTGYEITPVLAVIPPDLEIVPNPAEVAQWFEAPVDFVLDRENQVQKTIEVGGKVHPFI 169
BLAST of EWM21441.1 vs. NCBI_GenBank
Match: gi|552840107|ref|XP_005849966.1| (hypothetical protein CHLNCDRAFT_17375, partial [Chlorella variabilis] >gi|307109626|gb|EFN57864.1| hypothetical protein CHLNCDRAFT_17375, partial [Chlorella variabilis]) HSP 1 Score: 106.301 bits (264), Expect = 4.064e-25 Identity = 55/108 (50.93%), Postives = 69/108 (63.89%), Query Frame = 0
Query: 67 AAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGE-DVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPEVMKERE 173
AAVL+PLFE+ G++H +L R S + H+GEVCFPGGK D + D ++ ALREA EE+ L P VRV+ + P LS HL VTPVV VIPP PNP + E
Sbjct: 3 AAVLVPLFEDPASGEVHVVLNQRSSKLNTHSGEVCFPGGKRDPADADDIATALREAQEELSLDPAAVRVVACLPPFLSKHLLSVTPVVGVIPPHLRFSPNPSEARGEE 110
BLAST of EWM21441.1 vs. NCBI_GenBank
Match: gi|1180501960|ref|WP_084001906.1| (CoA pyrophosphatase [Altererythrobacter dongtanensis]) HSP 1 Score: 105.916 bits (263), Expect = 5.315e-25 Identity = 57/106 (53.77%), Postives = 71/106 (66.98%), Query Frame = 0
Query: 61 PVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNP 166
P L AAVLI + E + G LLT RP MR+HAG+ FPGGK+D GED V AALREA EE+G+ P+ VRV+G P + Y+VTPV+AV+PPD +PNP
Sbjct: 4 PDLLRPAAVLIAVTERSDPG---VLLTHRPETMRSHAGQAAFPGGKIDPGEDAVEAALREAHEELGIDPRDVRVIGPSDPFRTRTGYDVTPVLAVVPPDLPIRPNP 106
BLAST of EWM21441.1 vs. NCBI_GenBank
Match: gi|1049199907|gb|ANY20105.1| (putative NUDIX hydrolase [Altererythrobacter dongtanensis]) HSP 1 Score: 106.301 bits (264), Expect = 7.280e-25 Identity = 61/119 (51.26%), Postives = 75/119 (63.03%), Query Frame = 0
Query: 48 NDAMAYNRSRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNP 166
DAMA P L AAVLI + E + G LLT RP MR+HAG+ FPGGK+D GED V AALREA EE+G+ P+ VRV+G P + Y+VTPV+AV+PPD +PNP
Sbjct: 24 TDAMA-------PPDLLRPAAVLIAVTERSDPG---VLLTHRPETMRSHAGQAAFPGGKIDPGEDAVEAALREAHEELGIDPRDVRVIGPSDPFRTRTGYDVTPVLAVVPPDLPIRPNP 132
BLAST of EWM21441.1 vs. NCBI_GenBank
Match: gi|951527268|ref|WP_057883811.1| (coenzyme A pyrophosphatase [Altererythrobacter troitsensis]) HSP 1 Score: 103.99 bits (258), Expect = 4.588e-24 Identity = 56/107 (52.34%), Postives = 71/107 (66.36%), Query Frame = 0
Query: 61 PVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPE 167
P L AAVLI + E E G L+T RP MR+HAG+ FPGGK+D GED + AALREA EE+G+ P+ VRV+G P + Y+VTPV+AV+PPD PNP+
Sbjct: 30 PDLLRPAAVLIAVTERGEPG---VLVTHRPETMRSHAGQAAFPGGKIDPGEDAIEAALREAHEELGIHPRDVRVIGASDPFRTRTGYDVTPVLAVVPPDLPIVPNPD 133
BLAST of EWM21441.1 vs. NCBI_GenBank
Match: gi|1010966428|ref|WP_061925476.1| (coenzyme A pyrophosphatase [Altererythrobacter epoxidivorans] >gi|927350040|gb|ALE17051.1| hypothetical protein AMC99_01761 [Altererythrobacter epoxidivorans]) HSP 1 Score: 102.064 bits (253), Expect = 2.645e-23 Identity = 59/132 (44.70%), Postives = 74/132 (56.06%), Query Frame = 0
Query: 56 SRATSPVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGEDVVSAALREAWEEVGLAPKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPEVMK-----------EREKWT 176
SR +AAVLI + E E G LLT RP MR H G+V FPGGK+D GED V AALREA EE+ L P VR++GT + ++VTPV+ V+PPD PNP+ ++ RE WT
Sbjct: 27 SRFAEAGRATEAAVLIAVTERDEPG---LLLTQRPRDMRDHPGQVAFPGGKIDPGEDAVQAALREAHEEIALDPSQVRIIGTTDRYQTGTGFDVTPVLGVVPPDLDLTPNPDEVEAWFEVPLSLVLRRENWT 155
BLAST of EWM21441.1 vs. NCBI_GenBank
Match: gi|528897144|gb|EPZ36845.1| (NUDIX hydrolase-like domain-containing protein [Rozella allomycis CSF55]) HSP 1 Score: 102.449 bits (254), Expect = 4.229e-23 Identity = 57/109 (52.29%), Postives = 75/109 (68.81%), Query Frame = 0
Query: 61 PVTLCKAAVLIPLFENREDGKIHCLLTVRPSHMRAHAGEVCFPGGKLDDGE-DVVSAALREAWEEVGL-APKVVRVLGTMTPTLSLHLYEVTPVVAVIPPDFVAQPNPE 167
P ++ +AAVLIPLF + +D ++ LLTVR S +++HAGEVC PGGK D + D + ALREA EE+GL A V +VLG + PTLS V PVVA+I DFV + NP+
Sbjct: 20 PNSVTRAAVLIPLFVHEDD--LYVLLTVRSSKLKSHAGEVCLPGGKKDPSDSDDIETALREANEEIGLEARDVSKVLGLINPTLSKAYIYVQPVVAIIKDDFVPKNNPK 126 The following BLAST results are available for this feature:
BLAST of EWM21441.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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