EWM21484.1, cds9188 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21484.1 vs. NCBI_GenBank
Match: gi|585101714|gb|EWM21484.1| (hypothetical protein Naga_100019g52 [Nannochloropsis gaditana]) HSP 1 Score: 442.965 bits (1138), Expect = 2.472e-157 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0 Query: 1 MPSLVTRNLILSLVLLSSCSAFLMPNAPKPTRSVLQVGEGSTHVKELVALNPEDYVAIGLAMCYKINDGGKLDEVLVMEPLTAGTLECLALGVPTSYKRVMGLTCGELFNGEDLRNPSDVNIEALRPLAKGETVSECEDMLIRSMAAARTFKRRVEAQIIPLGEVADDFNFNTEKKRVLNQVFEPSFADNVKQDKSIDVYGRADEDFNDEVDKLANA 217 MPSLVTRNLILSLVLLSSCSAFLMPNAPKPTRSVLQVGEGSTHVKELVALNPEDYVAIGLAMCYKINDGGKLDEVLVMEPLTAGTLECLALGVPTSYKRVMGLTCGELFNGEDLRNPSDVNIEALRPLAKGETVSECEDMLIRSMAAARTFKRRVEAQIIPLGEVADDFNFNTEKKRVLNQVFEPSFADNVKQDKSIDVYGRADEDFNDEVDKLANA Sbjct: 1 MPSLVTRNLILSLVLLSSCSAFLMPNAPKPTRSVLQVGEGSTHVKELVALNPEDYVAIGLAMCYKINDGGKLDEVLVMEPLTAGTLECLALGVPTSYKRVMGLTCGELFNGEDLRNPSDVNIEALRPLAKGETVSECEDMLIRSMAAARTFKRRVEAQIIPLGEVADDFNFNTEKKRVLNQVFEPSFADNVKQDKSIDVYGRADEDFNDEVDKLANA 217
BLAST of EWM21484.1 vs. NCBI_GenBank
Match: gi|873231613|emb|CEM07801.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 200.29 bits (508), Expect = 4.677e-61 Identity = 103/196 (52.55%), Postives = 137/196 (69.90%), Query Frame = 0 Query: 33 SVLQVGEGSTHVKELV----ALNPEDYVAIGLAMCYKINDGGKLDEVLVMEPLTAGTLECLALGVPTSYKRVMGLTCGELFNGEDLRNPSDVNIEALRPLAKGETVSECEDMLIRSMAAARTFKRRVEAQIIPLGEVADDFNFNTEKKRVLNQVFEPSFADNVKQDKSIDVYGRADEDFNDE-------VDKLANA 217 SVL+ G G T +++ L +DY+A+GLA CY +ND KL+E V+EPLTAGTLE + GV TSY+RVM LT G+LF G+D+ +P+ + A+ P+ GE E + R +AAARTF+RR EAQ++ LGEVADDFNF+TE+KR+LNQ FEPSF DNVKQ SIDVYGR + + +DE +++LANA Sbjct: 51 SVLRAG-GVTLPHDMIDPYAPLKSDDYIALGLACCYLLNDKNKLEEYWVIEPLTAGTLETIDRGVDTSYRRVMALTLGDLFEGDDVNSPTGARLSAVEPMISGEEARFSEALTERVLAAARTFRRRPEAQLLDLGEVADDFNFSTERKRILNQKFEPSFDDNVKQHSSIDVYGRTESESSDEQAELDKQIEELANA 245
BLAST of EWM21484.1 vs. NCBI_GenBank
Match: gi|299115445|emb|CBN75610.1| (conserved hypothetical protei [Ectocarpus siliculosus]) HSP 1 Score: 164.081 bits (414), Expect = 5.249e-47 Identity = 85/162 (52.47%), Postives = 111/162 (68.52%), Query Frame = 0 Query: 47 LVALNPEDYVAIGLAMCYKINDGGKLDEVLVMEPLTAGTLECLA--LGVPTSYKRVMGLTCGELFNGEDLRNPSDVNIEALRPLAKGETVSECEDMLIRSMAAARTFKRRVEAQIIPLGEVADDFNFNTEKKRVLNQVFEPSFADNVKQDKSIDVYGRADED 206 LV L +DYVA GLA C+ +ND KLDE V EPLTA TLE +A + TSYKRV ++F G R P+ + ++ L+ L T CE+ + R++AAART+KRRVEAQ+ G++ + FNF+TE+KR+LN FEPSF DNVKQDKSIDVYGR +E+ Sbjct: 74 LVPLEDDDYVAFGLACCFVMNDNLKLDEYYVYEPLTAATLETIASSQSLETSYKRVTAFHAKDIFEGPPAR-PTGIQVDKLKILDGDVTAHICENPVERTLAAARTYKRRVEAQMCGYGDLLEGFNFSTERKRILNHKFEPSFDDNVKQDKSIDVYGREEEE 234
BLAST of EWM21484.1 vs. NCBI_GenBank
Match: gi|545707580|ref|XP_005706104.1| (hypothetical protein Gasu_30230 [Galdieria sulphuraria] >gi|452822566|gb|EME29584.1| hypothetical protein Gasu_30230 [Galdieria sulphuraria]) HSP 1 Score: 142.124 bits (357), Expect = 1.869e-38 Identity = 77/170 (45.29%), Postives = 106/170 (62.35%), Query Frame = 0 Query: 50 LNPEDYVAIGLAMCYKINDGGKLDEVLVMEPLTAGTLECLALGVPTSYKRVMGLTCGELFNGEDLRNPSDVNIEALRP-LAKGETVSECEDMLIRSMAAARTFKRRVEAQIIPLGEVADDFNFNTEKKRVLNQVFEPSFADNVKQDKSIDVYGR-ADEDFNDEVDKLANA 217 + P++Y +GLA C++ + GKL E++V+EP+ TLE + GVPTSYKR++ ++I ++ P + E VS CE+ R AA RT++ R+EA+ I LGEV NF+T KRVLN+ FEPSF DNVKQD SIDVYGR DE+ E++KL NA Sbjct: 75 VKPDEYTVLGLAFCFQRDSNGKLQELVVIEPVPTSTLETILQGVPTSYKRLVATVYSRA-----------MDISSIPPAFVEDERVSFCENYSERLQAATRTYRARLEAKKIQLGEVYVTINFSTSPKRVLNEKFEPSFEDNVKQDISIDVYGRKKDEEVKSEIEKLYNA 233
BLAST of EWM21484.1 vs. NCBI_GenBank
Match: gi|1189390193|gb|OSX77157.1| (hypothetical protein BU14_0159s0012 [Porphyra umbilicalis]) HSP 1 Score: 127.102 bits (318), Expect = 6.968e-33 Identity = 91/219 (41.55%), Postives = 124/219 (56.62%), Query Frame = 0 Query: 13 LVLLSSCSAF----LMPNAPKPTRSVLQVGEGSTHVKELVALNPE--DYVAIGLAMCYKINDGGKLDEVLVMEPLTAGTLE-CLALGVPTSYKRVMGLTCGELFNGEDLRNPSDVNIEALRPLAKGETVSECEDMLIRSMAAARTFKRR-VEAQIIPLGEV--ADD--FNFNTEK-KRVLNQVFEPSFADNVKQDKSIDVYGRADEDFN-DEVDKLANA 217 + + SC AF + AP SV+ + + E DY +GLA+CY+ N KLD VLV+EPL+ GTLE G PTSYKR++G T L + NPS++ + L +G++ S ED R AAARTFKRR + I+ +GEV A+D F T+ +R+LN+ +EP F DNVKQDK+IDVYGR +E+ +V KL NA Sbjct: 1 MAFVGSCGAFGTRSVAKRAPTARPSVVVAAPTPRMAWNIEGQDVEVSDYCPVGLAVCYQRNQNNKLDAVLVVEPLSTGTLENVTGTGQPTSYKRILGATIEGLPD-----NPSELPEDFL----QGDSASFSEDFAERMCAAARTFKRRPISKGILGVGEVKTAEDGTLTFCTDGIQRILNEEWEPKFDDNVKQDKTIDVYGRGEEEGGAADVQKLYNA 210
BLAST of EWM21484.1 vs. NCBI_GenBank
Match: gi|1119702440|ref|WP_072620532.1| (hypothetical protein [Spirulina major]) HSP 1 Score: 112.849 bits (281), Expect = 3.686e-28 Identity = 62/141 (43.97%), Postives = 86/141 (60.99%), Query Frame = 0 Query: 54 DYVAIGLAMCYKINDGGKLDEVLVMEPLTAGTLECLALGVPTSYKRVMGLTCGELFNGEDLRNPSDVNIEALRPLAKGETVSECEDMLIRSMAAARTFKRRVEAQ-IIPLGEVADDFNFNTEKKRVLNQVFEPSFADNVKQ 193 DY GLA C+ I D G++ E+ V+EP+ + LE L G+PTSY+ G T E F G++LR PS+ EA C++ R++AA+RT+KR AQ ++P+GE DDFN++TE+KRVLN S DNVKQ Sbjct: 16 DYCVFGLATCF-IRDEGEVREIHVVEPIPSAALEALYKGIPTSYQVAYGKTLAEFFEGDNLRMPSEFPGEA----------QFCDEFATRAVAASRTYKRSQAAQALLPVGEKKDDFNYSTERKRVLNTENVVSTEDNVKQ 145
BLAST of EWM21484.1 vs. NCBI_GenBank
Match: gi|302818442|ref|XP_002990894.1| (hypothetical protein SELMODRAFT_429288 [Selaginella moellendorffii] >gi|300141225|gb|EFJ07938.1| hypothetical protein SELMODRAFT_429288 [Selaginella moellendorffii]) HSP 1 Score: 114.775 bits (286), Expect = 9.769e-28 Identity = 66/167 (39.52%), Postives = 89/167 (53.29%), Query Frame = 0 Query: 51 NPEDYVAIGLAMCYKINDGGKLDEVLVMEPLTAGTLECLALGVPTSYKRVMGLTCGELFNGEDLRNPSDVNIEALRPLAKGETVSECEDMLIRSMAAARTFKRRVEAQ----IIPLGEVADDFNFNTEKKRVLNQVFEPSFADNVKQDKSIDVYGR-ADEDFNDEVD 212 NP+D+V +GL C+ + GKL + V+EP+ AG LEC+ G T YK V + + + P ++ A CED R+ AAR++ R + IPLG V DFN+N E KRVLN+V + ADN+KQD SIDVYGR D+D N D Sbjct: 72 NPDDFVVLGLGHCFIEDSNGKLQDHFVLEPIGAGALECMENGGKTCYKHVASMHLSTALAQDHSQLPEELRSGAF-----------CEDFAFRTKCAARSWMRDYPQEKIVRYIPLGTVRSDFNYNLEDKRVLNKVNIVTDADNIKQDMSIDVYGRKKDDDANTATD 227
BLAST of EWM21484.1 vs. NCBI_GenBank
Match: gi|302801985|ref|XP_002982748.1| (hypothetical protein SELMODRAFT_422124 [Selaginella moellendorffii] >gi|300149338|gb|EFJ15993.1| hypothetical protein SELMODRAFT_422124 [Selaginella moellendorffii]) HSP 1 Score: 114.39 bits (285), Expect = 1.098e-27 Identity = 66/167 (39.52%), Postives = 89/167 (53.29%), Query Frame = 0 Query: 51 NPEDYVAIGLAMCYKINDGGKLDEVLVMEPLTAGTLECLALGVPTSYKRVMGLTCGELFNGEDLRNPSDVNIEALRPLAKGETVSECEDMLIRSMAAARTFKRRVEAQ----IIPLGEVADDFNFNTEKKRVLNQVFEPSFADNVKQDKSIDVYGR-ADEDFNDEVD 212 NP+D+V +GL C+ + GKL + V+EP+ AG LEC+ G T YK V + + + P ++ A CED R+ AAR++ R + IPLG V DFN+N E KRVLN+V + ADN+KQD SIDVYGR D+D N D Sbjct: 72 NPDDFVVLGLGHCFIEDSNGKLQDHFVLEPIGAGALECMENGGKTCYKHVASMHLSTALAQDHSQLPEELRSGAF-----------CEDFAFRTKCAARSWMRDYPQEKIVRYIPLGTVRSDFNYNLEDKRVLNKVNIVTDADNIKQDMSIDVYGRKKDDDANTATD 227
BLAST of EWM21484.1 vs. NCBI_GenBank
Match: gi|1213733982|gb|OWY66670.1| (hypothetical protein B7486_35395 [cyanobacterium TDX16]) HSP 1 Score: 109.383 bits (272), Expect = 8.684e-27 Identity = 61/145 (42.07%), Postives = 89/145 (61.38%), Query Frame = 0 Query: 50 LNPEDYVAIGLAMCYKINDGGKLDEVLVMEPLTAGTLECLALGVPTSYKRVMGLTCGELFNGEDLRNPSDVNIEALRPLAKGETVSECEDMLIRSMAAARTFKRRVEAQ-IIPLGEVADDFNFNTEKKRVLNQVFEPSFADNVKQ 193 L+PEDYVAIGLA C+ + + G++ ++ ++EP+ + LE +A G+PTSYK V T G + G+ L+ P+ A +D R++AAART+K R A+ +IPLG +DFN++TE+KRVLN S DNVKQ Sbjct: 13 LSPEDYVAIGLATCF-VKEDGEVRDLEIIEPIPSAALEAIAKGIPTSYKLVSATTLGTVLAGDKLQIPAGFPTSA----------QFSDDFGQRAIAAARTYKSRTVAKDLIPLGTTREDFNYSTERKRVLNMKRVVSKDDNVKQ 146
BLAST of EWM21484.1 vs. NCBI_GenBank
Match: gi|496701932|ref|WP_009343475.1| (hypothetical protein [Raphidiopsis brookii] >gi|281198045|gb|EFA72939.1| conserved hypothetical protein [Raphidiopsis brookii D9]) HSP 1 Score: 108.997 bits (271), Expect = 1.321e-26 Identity = 60/145 (41.38%), Postives = 84/145 (57.93%), Query Frame = 0 Query: 50 LNPEDYVAIGLAMCYKINDGGKLDEVLVMEPLTAGTLECLALGVPTSYKRVMGLTCGELFNGEDLRNPSDVNIEALRPLAKGETVSECEDMLIRSMAAARTFKRRVEAQ-IIPLGEVADDFNFNTEKKRVLNQVFEPSFADNVKQ 193 L +DY+ IGLA C+ DG ++ E+ ++EP+ + LE + G+PTSYK V T G + +GE+L L P ET E+ L R+ +A RT+KRR AQ IPLG DFN++TE+KRVLN + DN+KQ Sbjct: 13 LRTDDYIVIGLATCFYKEDG-EVHELEIIEPIPSAALEAIIKGIPTSYKLVCATTLGSILDGENL----------LLPSGFPETAQFSEEFLQRTFSATRTYKRRESAQSFIPLGTTKSDFNYSTERKRVLNAARVVTKEDNIKQ 146 The following BLAST results are available for this feature:
BLAST of EWM21484.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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