EWM21460.1, cds9185 (CDS) Nannochloropsis gaditana

Overview
NameEWM21460.1
Unique Namecds9185
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:121352..122564 +
Alignment locationKK037252.1:122634..122851 +

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Properties
Property NameValue
Protein idEWM21460.1
ProductBRCT domain protein
Orig transcript idgnl|cribi|Naga_100019g55.482.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:121352..122564 +
KK037252.1supercontigKK037252.1:122634..122851 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR001357BRCT_dom
Homology
[Close]
BLAST of EWM21460.1 vs. NCBI_GenBank
Match: gi|585101690|gb|EWM21460.1| (BRCT domain protein [Nannochloropsis gaditana])

HSP 1 Score: 982.63 bits (2539), Expect = 0.000e+0
Identity = 476/476 (100.00%), Postives = 476/476 (100.00%), Query Frame = 0 
Query:    1 MVSAESLPASRRLSFKARSSEAVPRSQCDSFFASSPTQKRMIDHADPSTEELPRRRRYKPSSPPASSVAENDRNVEACMTKELAGRQVDVTSGRRFGGEQETNAMNAPDIRRVAVSCVEPNAEMKRQLRALGLSLVDDLRQADLLIAGDGATGVAARRTAKVMSALSLGLPLVDYSWLRNSAKLSVAQDPRGHPPSYKGPKTCADEMTDDRTTVQPSASVKAPFLEGWAVLAAFKSFGLNGVPSKGDLRLIVECAGGIFFDKPKDLESGRRKKTRRSSLLILSNECSMAHKTLGIEVRRLAVEQKAAGMGVYYLEALLAGAMKQRLDLFDHVLWQWDENDEEEQTDGDEKISCRLRGKENKAVSARASSKKNDHNSLNVPRGKFDVKKGGKKTDSTMEYRGRSRISPHVSLLTPQQNDRLRRLVEEQLVEWNCRPRKNAVEGGNRTLWKKRAMNYTYIRICRKRCHDRLPMQSNNS 476
            MVSAESLPASRRLSFKARSSEAVPRSQCDSFFASSPTQKRMIDHADPSTEELPRRRRYKPSSPPASSVAENDRNVEACMTKELAGRQVDVTSGRRFGGEQETNAMNAPDIRRVAVSCVEPNAEMKRQLRALGLSLVDDLRQADLLIAGDGATGVAARRTAKVMSALSLGLPLVDYSWLRNSAKLSVAQDPRGHPPSYKGPKTCADEMTDDRTTVQPSASVKAPFLEGWAVLAAFKSFGLNGVPSKGDLRLIVECAGGIFFDKPKDLESGRRKKTRRSSLLILSNECSMAHKTLGIEVRRLAVEQKAAGMGVYYLEALLAGAMKQRLDLFDHVLWQWDENDEEEQTDGDEKISCRLRGKENKAVSARASSKKNDHNSLNVPRGKFDVKKGGKKTDSTMEYRGRSRISPHVSLLTPQQNDRLRRLVEEQLVEWNCRPRKNAVEGGNRTLWKKRAMNYTYIRICRKRCHDRLPMQSNNS
Sbjct:    1 MVSAESLPASRRLSFKARSSEAVPRSQCDSFFASSPTQKRMIDHADPSTEELPRRRRYKPSSPPASSVAENDRNVEACMTKELAGRQVDVTSGRRFGGEQETNAMNAPDIRRVAVSCVEPNAEMKRQLRALGLSLVDDLRQADLLIAGDGATGVAARRTAKVMSALSLGLPLVDYSWLRNSAKLSVAQDPRGHPPSYKGPKTCADEMTDDRTTVQPSASVKAPFLEGWAVLAAFKSFGLNGVPSKGDLRLIVECAGGIFFDKPKDLESGRRKKTRRSSLLILSNECSMAHKTLGIEVRRLAVEQKAAGMGVYYLEALLAGAMKQRLDLFDHVLWQWDENDEEEQTDGDEKISCRLRGKENKAVSARASSKKNDHNSLNVPRGKFDVKKGGKKTDSTMEYRGRSRISPHVSLLTPQQNDRLRRLVEEQLVEWNCRPRKNAVEGGNRTLWKKRAMNYTYIRICRKRCHDRLPMQSNNS 476
The following BLAST results are available for this feature:
BLAST of EWM21460.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101690|gb|EWM21460.1|0.000e+0100.00BRCT domain protein [Nannochloropsis gaditana][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9215rna9215Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications