EWM21457.1, cds9184 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21457.1 vs. NCBI_GenBank
Match: gi|585101687|gb|EWM21457.1| (fha domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 339.732 bits (870), Expect = 3.584e-118 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0 Query: 1 MSTQRFDHLVEENETAERKTVPAVDECVISARLTFSDMPGQRKGVHLLESGENTIGRAAGNKVILDHPSISERHAIISVVDDCMFIKDCGSTNRTWLWDAARGTFQPRSLARLRDGDYLRLGTLEAQLALQSTAKEEQRAVEGEARLREGRERAAAEPEAVPHAP 165 MSTQRFDHLVEENETAERKTVPAVDECVISARLTFSDMPGQRKGVHLLESGENTIGRAAGNKVILDHPSISERHAIISVVDDCMFIKDCGSTNRTWLWDAARGTFQPRSLARLRDGDYLRLGTLEAQLALQSTAKEEQRAVEGEARLREGRERAAAEPEAVPHAP Sbjct: 1 MSTQRFDHLVEENETAERKTVPAVDECVISARLTFSDMPGQRKGVHLLESGENTIGRAAGNKVILDHPSISERHAIISVVDDCMFIKDCGSTNRTWLWDAARGTFQPRSLARLRDGDYLRLGTLEAQLALQSTAKEEQRAVEGEARLREGRERAAAEPEAVPHAP 165
BLAST of EWM21457.1 vs. NCBI_GenBank
Match: gi|1019022256|ref|XP_016080823.1| (PREDICTED: LOW QUALITY PROTEIN: mediator of DNA damage checkpoint protein 1 [Ornithorhynchus anatinus]) HSP 1 Score: 63.929 bits (154), Expect = 6.920e-9 Identity = 41/95 (43.16%), Postives = 49/95 (51.58%), Query Frame = 0 Query: 35 FSDMPGQRKGVHLLESGENTIGRAAGNKVILDHPSISERHAIISVVDDCM--FIKDCGSTNRTWLWDAARGTFQPRSLARLRDGDYLRLGTLEAQ 127 FS + G K LL GEN +GR AG V L PSIS+RHA+I + ++DCGS NRT L + QP RLRD D L L Q Sbjct: 70 FSSVHGPEKDF-LLSPGENVVGRVAGCAVTLPFPSISKRHAVIEAPGRGLPAVLRDCGSLNRTRLLRPST-LLQPGRAYRLRDRDLLLFADLPCQ 162
BLAST of EWM21457.1 vs. NCBI_GenBank
Match: gi|942704299|ref|WP_055407654.1| (hypothetical protein [Pyrodictium delaneyi] >gi|1207199838|gb|OWJ54435.1| hypothetical protein Pdsh_08200 [Pyrodictium delaneyi]) HSP 1 Score: 60.4622 bits (145), Expect = 3.432e-8 Identity = 30/95 (31.58%), Postives = 56/95 (58.95%), Query Frame = 0 Query: 28 VISARLTFSDMPGQRKGVHLLESGENTIGRAAGNKVILDHPSISERHAIISVVDDCMFIKDCGSTNRTWLWDAARGTFQPRSLARLRDGDYLRLG 122 VI++ +T ++ G + + G ++GR+ N +++ PS+S RHA++ + DD + ++D GSTN T+++D F+ A L+ G +RLG Sbjct: 112 VINSPVT--ELMGMKIPLQFEVYGRISLGRSLENVIVVPDPSVSRRHALVYIEDDKVVLEDLGSTNGTYIYDPGEAVFRRVDRAVLKPGMLVRLG 204
BLAST of EWM21457.1 vs. NCBI_GenBank
Match: gi|926368848|ref|WP_053698675.1| (FHA domain-containing protein [Streptomyces sp. NRRL F-5755]) HSP 1 Score: 60.8474 bits (146), Expect = 5.818e-8 Identity = 40/104 (38.46%), Postives = 55/104 (52.88%), Query Frame = 0 Query: 25 DECVISARLTFSDMPGQRKGVHLLESGENTIGRAAGNKVILDHPSISERHAIISVVDDCMFIKDCGSTNRTWLWDAAR--GTFQPRSLARLRDGDYLRLGTLEA 126 D C RL F+ + VH + T+GRA + LD P +S HA++ D +KD GSTN TWL ++ R GT+ RLRDGD +R G++EA Sbjct: 9 DSC---PRLIFTGTASVPRTVHAFRNRHLTVGRAPECDLRLDDPQVSNVHAVLRRSDGATSLKDKGSTNGTWL-NSVRIDGTYH-----RLRDGDVIRFGSVEA 103
BLAST of EWM21457.1 vs. NCBI_GenBank
Match: gi|1184237485|gb|OSC74079.1| (hypothetical protein B5180_14800 [Streptomyces sp. BF-3]) HSP 1 Score: 61.2326 bits (147), Expect = 6.307e-8 Identity = 56/143 (39.16%), Postives = 68/143 (47.55%), Query Frame = 0 Query: 21 VPAVDEC---VISARLTFSDMPGQRKGVHLLESGENTIGRAAGNKVILDHPSISERHAIISVVDDC-MFIKDCGSTNRTWLWDAARGTFQPRSLARLRDGDYLRLGTLEAQLALQSTAKEEQRAVEGEARLREGR-ERAAAEP 158 VP DE V+ A+L P GVHLL G+ IGR+A V LD P +S H +SV DD + + D GSTN T L D + +P RL G LRLG +L S A +GE LR R E AA P Sbjct: 86 VPGDDEATDDVVPAQLHVVAGP-DAGGVHLLHGGQIRIGRSADADVPLDDPDVSRLHCAVSVSDDGRVSVADLGSTNGTSL-DGVKVGERP---VRLTPGALLRLGESTLRLTSGSRPTTLPTAPDGEGHLRVTRAETGAAAP 223
BLAST of EWM21457.1 vs. NCBI_GenBank
Match: gi|941938407|gb|ALL00385.1| (hypothetical protein Pyrde_0335 [Pyrodictium delaneyi]) HSP 1 Score: 60.077 bits (144), Expect = 7.356e-8 Identity = 30/95 (31.58%), Postives = 56/95 (58.95%), Query Frame = 0 Query: 28 VISARLTFSDMPGQRKGVHLLESGENTIGRAAGNKVILDHPSISERHAIISVVDDCMFIKDCGSTNRTWLWDAARGTFQPRSLARLRDGDYLRLG 122 VI++ +T ++ G + + G ++GR+ N +++ PS+S RHA++ + DD + ++D GSTN T+++D F+ A L+ G +RLG Sbjct: 133 VINSPVT--ELMGMKIPLQFEVYGRISLGRSLENVIVVPDPSVSRRHALVYIEDDKVVLEDLGSTNGTYIYDPGEAVFRRVDRAVLKPGMLVRLG 225
BLAST of EWM21457.1 vs. NCBI_GenBank
Match: gi|1113192450|gb|OJU62727.1| (hypothetical protein BGO01_09970 [Armatimonadetes bacterium 55-13]) HSP 1 Score: 60.077 bits (144), Expect = 1.097e-7 Identity = 39/120 (32.50%), Postives = 60/120 (50.00%), Query Frame = 0 Query: 9 LVEENETAERKTVPAVDECVISARLTFSDMPGQRKGVHLLESGENTIGRAAGNKVILDHPSISERHAIISVVDDCMFIKDCGSTNRTWLWDAARGTFQPRSLARLRDGDYLRLGTLEAQL 128 ++ N+TA T P V+ V A L D + L++G N+ GR + N V + P +S +H +I + D+ F+ D GSTN T L DA P + D +RLG+LE ++ Sbjct: 187 VISSNKTAAIATPPKVE--VAPATLVGPDKE------YPLKAGLNSFGRKSDNDVSITDPYVSGKHGVIEITDNGYFLTDIGSTNGTMLNDAK---LSPNMRTAITAEDVIRLGSLELRI 295
BLAST of EWM21457.1 vs. NCBI_GenBank
Match: gi|1051891869|emb|SCD77778.1| (FtsK/SpoIIIE family protein [Streptomyces sp. DvalAA-43]) HSP 1 Score: 60.4622 bits (145), Expect = 1.275e-7 Identity = 51/132 (38.64%), Postives = 62/132 (46.97%), Query Frame = 0 Query: 21 VPAVDECV---ISARLTFSDMPGQRKGVHLLESGENTIGRAAGNKVILDHPSISERHAIISV-VDDCMFIKDCGSTNRTWLWDAARGTFQPRSLARLRDGDYLRLGTLEAQLALQSTAKEEQRAVEGEARLR 148 VP DE V + ARL P GVHLL G IGR+A V LD P +S H ++V D + + D GSTN T L D A +P RL+ G LRLG L + A A +GE LR Sbjct: 86 VPGEDEAVDDAVPARLHVVAGP-DAGGVHLLHGGRIRIGRSADADVPLDDPDVSRLHCAVTVSADGLVSVADLGSTNGT-LLDGAEVRDRP---VRLKPGALLRLGESTLLLTSGAPAPTLATAPDGEGHLR 212
BLAST of EWM21457.1 vs. NCBI_GenBank
Match: gi|1051878196|emb|SCE61159.1| (Inner membrane component of T3SS domain-containing protein, partial [Streptomyces sp. OspMP-M43]) HSP 1 Score: 59.6918 bits (143), Expect = 1.438e-7 Identity = 53/141 (37.59%), Postives = 64/141 (45.39%), Query Frame = 0 Query: 21 VPAVDECV---ISARLTFSDMPGQRKGVHLLESGENTIGRAAGNKVILDHPSISERHAIISVVDDC-MFIKDCGSTNRTWLWDAARGTFQPRSLARLRDGDYLRLGTLEAQLALQSTAKEEQRAVEGEARLREGRERAAAE 157 VP DE + ARL P GVHLL G+ IGR+A V LD P +S H ++V DD + + D GSTN T L D +P RL G LRLG +L S A +GE LR R AA Sbjct: 133 VPGDDEATDDPVPARLHVVAGP-DAGGVHLLHGGQIRIGRSADADVPLDDPDVSRLHCAVTVSDDGRVSVVDLGSTNGTSL-DGVEVRERP---VRLAPGALLRLGESALRLTTGSRPATLPTAPDGEGHLRVARTETAAS 268
BLAST of EWM21457.1 vs. NCBI_GenBank
Match: gi|1087555062|emb|SDK69343.1| (FtsK/SpoIIIE family protein [Streptomyces indicus]) HSP 1 Score: 60.077 bits (144), Expect = 1.495e-7 Identity = 45/108 (41.67%), Postives = 56/108 (51.85%), Query Frame = 0 Query: 44 GVHLLESGENTIGRAAGNKVILDHPSISERHAIISVVDDC-MFIKDCGSTNRTWLWDAARGTFQPRSLARLRDGDYLRLGTLEAQLALQSTAKEE--QRAVEGEARLR 148 GVHLL G TIGR+A V LD P +S H +++ DD + + D GSTN T L GT RL G LR+G E+ L L +TA E A +GE LR Sbjct: 114 GVHLLHGGRITIGRSADADVPLDDPDVSRLHCAVTLADDGRVTVTDLGSTNGTGL----DGTPVHDRPVRLTPGALLRIG--ESTLRLSTTADPEPLSTAPDGEGHLR 215 The following BLAST results are available for this feature:
BLAST of EWM21457.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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