EWM21504.1, cds9182 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21504.1 vs. NCBI_GenBank
Match: gi|585101734|gb|EWM21504.1| (hypothetical protein Naga_100019g58 [Nannochloropsis gaditana]) HSP 1 Score: 454.521 bits (1168), Expect = 1.288e-161 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0 Query: 1 MSLEHWQEELQRRVGELQDHLKELKESHGSVSTATLQKRKHLDACQRRLDEVREASKNCDRAVRIVKDPVKRTAGKDMLRGVERQIRECQDEVRRAELKLNYSHAINMDKDTSEGEYKKEIDRMQDGMKESYARQLETLDRTLDVAGKARDGVESQGQQIHTLAEETGRIGDGLERAEYAVQRFKRQVSSDRICQALTVGNVLVLVVLVVLAILNRKPLLHSIGV 225 MSLEHWQEELQRRVGELQDHLKELKESHGSVSTATLQKRKHLDACQRRLDEVREASKNCDRAVRIVKDPVKRTAGKDMLRGVERQIRECQDEVRRAELKLNYSHAINMDKDTSEGEYKKEIDRMQDGMKESYARQLETLDRTLDVAGKARDGVESQGQQIHTLAEETGRIGDGLERAEYAVQRFKRQVSSDRICQALTVGNVLVLVVLVVLAILNRKPLLHSIGV Sbjct: 1 MSLEHWQEELQRRVGELQDHLKELKESHGSVSTATLQKRKHLDACQRRLDEVREASKNCDRAVRIVKDPVKRTAGKDMLRGVERQIRECQDEVRRAELKLNYSHAINMDKDTSEGEYKKEIDRMQDGMKESYARQLETLDRTLDVAGKARDGVESQGQQIHTLAEETGRIGDGLERAEYAVQRFKRQVSSDRICQALTVGNVLVLVVLVVLAILNRKPLLHSIGV 225
BLAST of EWM21504.1 vs. NCBI_GenBank
Match: gi|585113016|gb|EWM30357.1| (soluble nsf attachment protein receptor [Nannochloropsis gaditana]) HSP 1 Score: 63.929 bits (154), Expect = 1.315e-8 Identity = 54/235 (22.98%), Postives = 106/235 (45.11%), Query Frame = 0 Query: 3 LEHWQEELQRRVGELQDHLKELKESHGSVSTATLQKRKHLDACQRRLDEVREASKNCDRAVRI-VKDPVKRTAGKDMLRGVERQIRECQDEVRRAELKLNYSHAI----------NMDKDTSEGEYKKEIDRMQDGMKESYARQLETLDRTLDVAGKARDGVESQGQQIHTLAEETGRIGDGLERAEYAVQRFKRQVSSDRICQALTVGNVLVLVVLVVLAILN----RKPLLHS 222 +E+W EL ++ EL+ + LK G A + K + L VRE K + +R+ +K+ +R + L+ V+ +I + E++ A+ + N ++++ + Y E ++QD + S L ++ + V D V Q +QI + + + DGL RA+ ++ F R++++D+ Q V N +LV ++V + R P +H+ Sbjct: 4 IEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAK------SEATLKRVREVKKGYNYEMRMSLKNDPRRHEYAEKLKAVDERIAALETELKWAKTEANKKSLFKGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVRAPEIHA 232
BLAST of EWM21504.1 vs. NCBI_GenBank
Match: gi|1210524621|dbj|GAX16521.1| (hypothetical protein FisN_7Lh244 [Fistulifera solaris]) HSP 1 Score: 62.003 bits (149), Expect = 5.737e-8 Identity = 48/229 (20.96%), Postives = 110/229 (48.03%), Query Frame = 0 Query: 3 LEHWQEELQRRVGELQDHLKELKESHGSVSTATLQKRKHLDACQRRLDEVREASKNCDRAVRIVKDPVKRTAGKDMLRGVERQIRECQDEVRRAELKLNYSHAINMDKDTSEGEYK------------KEIDRMQDGMKESYARQLETLDRTLDVAGKARDGVESQGQQIHTLAEETGRIGDGLERAEYAVQRFKRQVSSDRICQALTVGNVLVLVVLVVLAILNRKPL 219 +++W++ L + + L+++ G+ K++ ++ C+++L + + ++ +R+V+D R + L +++Q++ Q + + E + N + D E ++ KE +QD ++S A + + +V + +E Q I + +ET R+ D L RAE +++F ++++SD Q + N ++LVV+V+ AI+ + L Sbjct: 4 IQYWEDILAEDIQHITAMLEDIPHMKGA------DKKREINNCKKKLRDAAGSKRSFKMEIRLVQDQALRKEYEARLNRLDQQLKVMQQDCKAFEAE-NARGELFTDGGDEERQFNEADGVKAGDSMLKEASALQDKTQDSLANTKNMIASSKEVGVATLEELERQRNVIQNIEKETDRLDDNLARAEALIKQFSKRMASDHFIQCFAMINCILLVVVVLYAIIKKGSL 225 The following BLAST results are available for this feature:
BLAST of EWM21504.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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