EWM21487.1, cds9178 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21487.1 vs. NCBI_GenBank
Match: gi|585101717|gb|EWM21487.1| (hypothetical protein Naga_100019g62 [Nannochloropsis gaditana]) HSP 1 Score: 885.174 bits (2286), Expect = 0.000e+0 Identity = 439/439 (100.00%), Postives = 439/439 (100.00%), Query Frame = 0
Query: 1 MLSASSASIASALPASDPNFPASLQGVSARGLVSLERAEQILQRLIDTVNEQGLQISSIFLLLQTLVGTDTQPLPRSLLDVEGKFSRLSHRLERIEQAIQVPGLAPGVSIGEVVNANGVELNHAAEALLTKADKADVEVRQHKLEEEVAGVYAWAGARELVERLEESNRATRVQVHAMETALGCKLDKSELAGMEATVNRLKAFDARMETLERGHVQNMADVQAKVQALEEHRMETDRLVGATRRAVGELEERHGAWKMETLELLKEVDKELAATASVTQLERKLDARVWEREWRSACERLDQKVDVPEMVALAERLESVAGDLVKLSRESDQYSRFVAWYYSRGQAYEHNMQTLNRTLGRLARDSLLKHVASAEVRSGIGGGQRGEYGSQVENGIRDRGLDDRELILSSSSSDTASPPNTESTPEDEHAKEGSFKPLA 439
MLSASSASIASALPASDPNFPASLQGVSARGLVSLERAEQILQRLIDTVNEQGLQISSIFLLLQTLVGTDTQPLPRSLLDVEGKFSRLSHRLERIEQAIQVPGLAPGVSIGEVVNANGVELNHAAEALLTKADKADVEVRQHKLEEEVAGVYAWAGARELVERLEESNRATRVQVHAMETALGCKLDKSELAGMEATVNRLKAFDARMETLERGHVQNMADVQAKVQALEEHRMETDRLVGATRRAVGELEERHGAWKMETLELLKEVDKELAATASVTQLERKLDARVWEREWRSACERLDQKVDVPEMVALAERLESVAGDLVKLSRESDQYSRFVAWYYSRGQAYEHNMQTLNRTLGRLARDSLLKHVASAEVRSGIGGGQRGEYGSQVENGIRDRGLDDRELILSSSSSDTASPPNTESTPEDEHAKEGSFKPLA
Sbjct: 1 MLSASSASIASALPASDPNFPASLQGVSARGLVSLERAEQILQRLIDTVNEQGLQISSIFLLLQTLVGTDTQPLPRSLLDVEGKFSRLSHRLERIEQAIQVPGLAPGVSIGEVVNANGVELNHAAEALLTKADKADVEVRQHKLEEEVAGVYAWAGARELVERLEESNRATRVQVHAMETALGCKLDKSELAGMEATVNRLKAFDARMETLERGHVQNMADVQAKVQALEEHRMETDRLVGATRRAVGELEERHGAWKMETLELLKEVDKELAATASVTQLERKLDARVWEREWRSACERLDQKVDVPEMVALAERLESVAGDLVKLSRESDQYSRFVAWYYSRGQAYEHNMQTLNRTLGRLARDSLLKHVASAEVRSGIGGGQRGEYGSQVENGIRDRGLDDRELILSSSSSDTASPPNTESTPEDEHAKEGSFKPLA 439
BLAST of EWM21487.1 vs. NCBI_GenBank
Match: gi|673039529|ref|XP_008873725.1| (hypothetical protein H310_09433 [Aphanomyces invadans] >gi|574470506|gb|ETV97516.1| hypothetical protein H310_09433 [Aphanomyces invadans]) HSP 1 Score: 72.0182 bits (175), Expect = 4.116e-10 Identity = 102/399 (25.56%), Postives = 172/399 (43.11%), Query Frame = 0
Query: 24 LQGVSARGLVSLERAEQILQRLIDTV----NEQG-LQISSIFLLLQTLVGTDTQPLPRSLLDVEGKFSRLSHRLERIEQAIQVPGLAPGVSIGEVVNANGVELNHAAEALLTKADKADVEVRQHKLEEEVAGVYAW----AGARELVERLEESNRATRVQVHAMETALGCKLDKSELAGMEATVNRLKAFDARMETLERGHVQ---NMADVQAKVQALEEH-RMET---DRLVGATRRAVGEL--EERHGAWKMET---------------LELLKEVDKELAAT--ASVTQLER-----------KLDARVWEREWRSACERLDQKVDVPEMVALAERLESVAGDLVKLSRESDQYS----RFVAWYYSRGQAYEHNMQTLNRTLGRLARDSLLKHVA 372
+Q S LV + AE + L+DT+ NE G L+ S L+LQ V + +V + L R++ +E AI++P + ++G +V AN E+ E L K D A VE ++E +++ EL+ RL ++ +E + K+DK+E M+A + AF R +E Q +A AK + ++H ET +LV R VG L E G +E L+ +++ + AA+ +S+ QL + +LD +V +W + ++ V +A+ ++V L + D + RF+ WY++RG AYEHNMQ + L +L+ L+HV+
Sbjct: 6 MQRRSLADLVDMRAAESTFKCLMDTLEAQANEIGQLKASVAALVLQNSVQSAWND------NVTITQATLMPRIDALEAAIKLPNV-RNATLGSIVAANYKEIVSMREKLQRKIDAAVVEDACRRVETKLSSALDTLRKDCVTLELISRLHMDQDELHTKLATVEAQIDSKMDKTEATRMDAVATTMHAFIPRCSEIEHSLQQLHEKLAASNAKCRQHDQHVSTETAHLRQLVSQQHRDVGALRAETTAGQATIEAAVQACKENISLCHNKLQTIRQAHADFAASTRSSLRQLTQTGERNFQSLRDELDGKVSRTDWDAQRREMEALVQTKTPLAVTAATKAVVDKLDEWVTRCDAHVQLSLRFIDWYFNRGDAYEHNMQVMEAQLKQLS----LRHVS 393
BLAST of EWM21487.1 vs. NCBI_GenBank
Match: gi|298708598|emb|CBJ30682.1| (hypothetical protein Esi_0209_0049 [Ectocarpus siliculosus]) HSP 1 Score: 64.3142 bits (155), Expect = 8.157e-8 Identity = 54/199 (27.14%), Postives = 97/199 (48.74%), Query Frame = 0
Query: 32 LVSLERAEQILQRLIDTVNEQGLQISSIFL-LLQTLVGTDTQPLPRSLLDVEGKFSRLSHRLERIEQAIQVP----GLAPGVSIGEVVNANGVELNHAAEALLTKADKADVEVRQHKLE----EEVAGVYAWAGARELVERLEESNRATRVQVHAMETALGCKLDKSELAGMEATVNRLKAF-----DA--RMETLERG 214
+++L++AE + QRL++ V L ++++ + + G D + + ++ G+ + L R+ E A+ +P G ++GE V ANG L ++ L KA + D+ + +LE E V W R+ + L +NR ++ A+E L K+D+SEL M+A ++ DA R+ TLE G
Sbjct: 7 ILNLDKAELVFQRLVEAVESHSLDLAAVRRDVSRKASGEDLRGM---CTEINGRLAALERRVAATEAAVSIPENSGGSGVSFTVGEAVRANGQALLGLSKQLEEKAGRDDLSAKGEELEACIRERERAVRQWGVGRDFADSLGRANRGLAGKLLAVEGVLSTKIDRSELDNMQAACAKVSTVSDFLDDAARRVSTLEAG 202 The following BLAST results are available for this feature:
BLAST of EWM21487.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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