EWM21485.1, cds9176 (CDS) Nannochloropsis gaditana

Overview
NameEWM21485.1
Unique Namecds9176
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:104392..105726 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21485.1
Producttranslation elongation factor 1
Orig transcript idgnl|cribi|Naga_100019g64.507.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:104392..105726 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0008135translation factor activity, RNA binding
GO:0000166nucleotide binding
GO:0003746translation elongation factor activity
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Vocabulary: INTERPRO
TermDefinition
IPR009001Transl_elong_EF1A/Init_IF2_C
IPR009000Transl_B-barrel
IPR031157G_TR_CS
IPR004160Transl_elong_EFTu/EF1A_C
IPR004539Transl_elong_EF1A_euk/arc
IPR004161Transl_elong_EFTu/EF1A_2
IPR027417P-loop_NTPase
IPR000795TF_GTP-bd_dom
Homology
BLAST of EWM21485.1 vs. NCBI_GenBank
Match: gi|585101715|gb|EWM21485.1| (translation elongation factor 1 [Nannochloropsis gaditana])

HSP 1 Score: 914.835 bits (2363), Expect = 0.000e+0
Identity = 444/444 (100.00%), Postives = 444/444 (100.00%), Query Frame = 0
Query:    1 MGKEKVHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAELGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIDRSTNMAWYKGPTLLEALDNINPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTIAPAMVTTEVKSVEMHHESMAEALPGDNVGFNVKNVSVKEIRRGYVAGDSKKDPPAGAANFVAQVIVMNHPGQIQNGYCPVLDCHTAHVACKFAEITEKIDRRTGAVTEANPKFVQSGDGCYVTLEPSKPMVVESFTEYPPLGRFAVRDMRQTVAVGVVKSVDKKATDSKKGGAKKK 444
            MGKEKVHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAELGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIDRSTNMAWYKGPTLLEALDNINPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTIAPAMVTTEVKSVEMHHESMAEALPGDNVGFNVKNVSVKEIRRGYVAGDSKKDPPAGAANFVAQVIVMNHPGQIQNGYCPVLDCHTAHVACKFAEITEKIDRRTGAVTEANPKFVQSGDGCYVTLEPSKPMVVESFTEYPPLGRFAVRDMRQTVAVGVVKSVDKKATDSKKGGAKKK
Sbjct:    1 MGKEKVHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAELGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIDRSTNMAWYKGPTLLEALDNINPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTIAPAMVTTEVKSVEMHHESMAEALPGDNVGFNVKNVSVKEIRRGYVAGDSKKDPPAGAANFVAQVIVMNHPGQIQNGYCPVLDCHTAHVACKFAEITEKIDRRTGAVTEANPKFVQSGDGCYVTLEPSKPMVVESFTEYPPLGRFAVRDMRQTVAVGVVKSVDKKATDSKKGGAKKK 444          
BLAST of EWM21485.1 vs. NCBI_GenBank
Match: gi|301111276|ref|XP_002904717.1| (translation elongation factor 1-alpha, putative [Phytophthora infestans T30-4] >gi|301115308|ref|XP_002905383.1| translation elongation factor 1-alpha, putative [Phytophthora infestans T30-4] >gi|262095047|gb|EEY53099.1| translation elongation factor 1-alpha, putative [Phytophthora infestans T30-4] >gi|262110172|gb|EEY68224.1| translation elongation factor 1-alpha, putative [Phytophthora infestans T30-4])

HSP 1 Score: 779.63 bits (2012), Expect = 0.000e+0
Identity = 371/444 (83.56%), Postives = 400/444 (90.09%), Query Frame = 0
Query:    1 MGKEKVHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAELGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIDRSTNMAWYKGPTLLEALDNINPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTIAPAMVTTEVKSVEMHHESMAEALPGDNVGFNVKNVSVKEIRRGYVAGDSKKDPPAGAANFVAQVIVMNHPGQIQNGYCPVLDCHTAHVACKFAEITEKIDRRTGAVTEANPKFVQSGDGCYVTLEPSKPMVVESFTEYPPLGRFAVRDMRQTVAVGVVKSVDKKATDSKKGGAKKK 444
            MGKEKVH++LVVIGHVDAGKSTTTGHLIYKCGGIDKR IEKFEKEAAELGK+SFKYAWVLD LKAERERGITIDIALWKFESPKY+FT+IDAPGHRDFIKNMITGTSQAD AIL+VASG GEFEAGI K+GQTREHALLAFTLGVKQMIV +NKMDDSSV YG+AR+ EIK EV+ YLKKVGYKPAK+PF+PISGW GDNMIDRSTNM WYKGP LLEALDN+N PKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGMV T  P  ++TEVKSVEMHHES+ EA+PGDNVGFNVKNVSVKE+RRG+VA DSK DP     +F AQVIV+NHPGQI NGY PVLDCHTAHVACKF EITEK+DRR+G V E  PKFV+SGD C V LEPSKPM VESF EYPPLGRFAVRDMRQTVAVGV+KSV+KK   S KGGAKKK
Sbjct:    1 MGKEKVHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKTSFKYAWVLDNLKAERERGITIDIALWKFESPKYFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVKQMIVAINKMDDSSVMYGQARYEEIKSEVTTYLKKVGYKPAKIPFVPISGWEGDNMIDRSTNMPWYKGPFLLEALDNLNAPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVGLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGFVASDSKNDPAKATQDFTAQVIVLNHPGQIGNGYSPVLDCHTAHVACKFKEITEKMDRRSGKVLETAPKFVKSGDACMVILEPSKPMTVESFQEYPPLGRFAVRDMRQTVAVGVIKSVNKKEA-SGKGGAKKK 443          
BLAST of EWM21485.1 vs. NCBI_GenBank
Match: gi|298711872|emb|CBJ32893.1| (EEF1A2, eukaryotic translation elongation factor 1 alpha [Ectocarpus siliculosus] >gi|298711873|emb|CBJ32894.1| EEF1A1, eukaryotic translation elongation factor 1 alpha [Ectocarpus siliculosus])

HSP 1 Score: 777.704 bits (2007), Expect = 0.000e+0
Identity = 367/430 (85.35%), Postives = 395/430 (91.86%), Query Frame = 0
Query:    1 MGKEKVHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAELGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIDRSTNMAWYKGPTLLEALDNINPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTIAPAMVTTEVKSVEMHHESMAEALPGDNVGFNVKNVSVKEIRRGYVAGDSKKDPPAGAANFVAQVIVMNHPGQIQNGYCPVLDCHTAHVACKFAEITEKIDRRTGAVTEANPKFVQSGDGCYVTLEPSKPMVVESFTEYPPLGRFAVRDMRQTVAVGVVKSVD 430
            MGKEK+H+NLVVIGHVDAGKSTTTGHLIYKCGGIDKR IEKFEKEAAELGKSSFKYAWVLD LKAERERGITIDIALWKFESPKY FT+IDAPGHRDFIKNMITGTSQADVA+L+VASG GEFEAGI K+GQTREHALLAFTLGVKQMIVC+NKMDDSSV YGE R+ EIKEEV+ YLKKVGYKPAK+PF+PISGW GDNMID+STNM WYKGP LLEALD +  P RPTDKPLRLPLQDVYKIGGIGTVPVGRVETG LKPGMVVT AP M+ TEVKSVEMHHE++ EA+PGDNVGFNVKNVSVK+IRRGYVAGDSK+DPP GA+ F AQVIVMNHPGQI NGY PVLDCHTAHVACKF EIT+K+DRR+G V E NPKFV++GD C V +EPSKPM VESF EYPPLGRFAVRDMRQTVAVGV+KSV+
Sbjct:    1 MGKEKIHINLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKSSFKYAWVLDNLKAERERGITIDIALWKFESPKYNFTVIDAPGHRDFIKNMITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYGEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSTNMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGCLKPGMVVTFAPCMLDTEVKSVEMHHEALPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGASAFNAQVIVMNHPGQISNGYAPVLDCHTAHVACKFKEITQKMDRRSGKVMEENPKFVKTGDACMVNMEPSKPMCVESFQEYPPLGRFAVRDMRQTVAVGVIKSVE 430          
BLAST of EWM21485.1 vs. NCBI_GenBank
Match: gi|675193323|ref|XP_008905546.1| (elongation factor 1-alpha [Phytophthora parasitica INRA-310] >gi|568094203|gb|ETN08985.1| elongation factor 1-alpha [Phytophthora parasitica INRA-310])

HSP 1 Score: 774.237 bits (1998), Expect = 0.000e+0
Identity = 364/429 (84.85%), Postives = 390/429 (90.91%), Query Frame = 0
Query:    1 MGKEKVHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAELGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIDRSTNMAWYKGPTLLEALDNINPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTIAPAMVTTEVKSVEMHHESMAEALPGDNVGFNVKNVSVKEIRRGYVAGDSKKDPPAGAANFVAQVIVMNHPGQIQNGYCPVLDCHTAHVACKFAEITEKIDRRTGAVTEANPKFVQSGDGCYVTLEPSKPMVVESFTEYPPLGRFAVRDMRQTVAVGVVKSV 429
            MGKEKVH++LVVIGHVDAGKSTTTGHLIYKCGGIDKR IEKFEKEAAELGK+SFKYAWVLD LKAERERGITIDIALWKFESPKY+FT+IDAPGHRDFIKNMITGTSQAD AIL+VASG GEFEAGI K+GQTREHALLAFTLGVKQMIV +NKMDDSSV YG+AR+ EIK EV+ YLKKVGYKPAK+PF+PISGW GDNMIDRSTNM WYKGP LLEALDN+NPPKRP DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGMV T  P  ++TEVKSVEMHHES+ EA+PGDNVGFNVKNVSVKE+RRGYVA DSK DP  G  +F AQVIV+NHPGQI NGY PVLDCHTAHVACKF EITEK+DRR+G V E  PKFV+SGD C V LEPSKPM VESF EYPPLGRFAVRDMRQTVAVGV+KSV
Sbjct:  202 MGKEKVHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKTSFKYAWVLDNLKAERERGITIDIALWKFESPKYFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVKQMIVAINKMDDSSVMYGQARYEEIKNEVTTYLKKVGYKPAKIPFVPISGWEGDNMIDRSTNMPWYKGPYLLEALDNLNPPKRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVGLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGYVASDSKNDPAKGTQDFTAQVIVLNHPGQIGNGYSPVLDCHTAHVACKFKEITEKMDRRSGKVLETAPKFVKSGDACMVILEPSKPMTVESFQEYPPLGRFAVRDMRQTVAVGVIKSV 630          
BLAST of EWM21485.1 vs. NCBI_GenBank
Match: gi|675193593|ref|XP_008905681.1| (elongation factor 1-alpha [Phytophthora parasitica INRA-310] >gi|74231225|gb|ABA00716.1| translation elongation factor 1 alpha [Phytophthora parasitica] >gi|566024065|gb|ETI46976.1| elongation factor 1-alpha [Phytophthora parasitica P1569] >gi|568094338|gb|ETN09120.1| elongation factor 1-alpha [Phytophthora parasitica INRA-310] >gi|570327604|gb|ETO75552.1| elongation factor 1-alpha [Phytophthora parasitica P1976] >gi|570951374|gb|ETP16631.1| elongation factor 1-alpha [Phytophthora parasitica CJ01A1] >gi|570985383|gb|ETP44695.1| elongation factor 1-alpha [Phytophthora parasitica P10297] >gi|570985600|gb|ETP44841.1| elongation factor 1-alpha [Phytophthora parasitica P10297] >gi|970632632|gb|KUF78794.1| Elongation factor 1-alpha [Phytophthora nicotianae] >gi|970642056|gb|KUF83866.1| Elongation factor 1-alpha [Phytophthora nicotianae] >gi|970651740|gb|KUF90512.1| hypothetical protein AM588_10010410 [Phytophthora nicotianae])

HSP 1 Score: 771.926 bits (1992), Expect = 0.000e+0
Identity = 364/429 (84.85%), Postives = 390/429 (90.91%), Query Frame = 0
Query:    1 MGKEKVHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAELGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIDRSTNMAWYKGPTLLEALDNINPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTIAPAMVTTEVKSVEMHHESMAEALPGDNVGFNVKNVSVKEIRRGYVAGDSKKDPPAGAANFVAQVIVMNHPGQIQNGYCPVLDCHTAHVACKFAEITEKIDRRTGAVTEANPKFVQSGDGCYVTLEPSKPMVVESFTEYPPLGRFAVRDMRQTVAVGVVKSV 429
            MGKEKVH++LVVIGHVDAGKSTTTGHLIYKCGGIDKR IEKFEKEAAELGK+SFKYAWVLD LKAERERGITIDIALWKFESPKY+FT+IDAPGHRDFIKNMITGTSQAD AIL+VASG GEFEAGI K+GQTREHALLAFTLGVKQMIV +NKMDDSSV YG+AR+ EIK EV+ YLKKVGYKPAK+PF+PISGW GDNMIDRSTNM WYKGP LLEALDN+NPPKRP DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGMV T  P  ++TEVKSVEMHHES+ EA+PGDNVGFNVKNVSVKE+RRGYVA DSK DP  G  +F AQVIV+NHPGQI NGY PVLDCHTAHVACKF EITEK+DRR+G V E  PKFV+SGD C V LEPSKPM VESF EYPPLGRFAVRDMRQTVAVGV+KSV
Sbjct:    1 MGKEKVHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKTSFKYAWVLDNLKAERERGITIDIALWKFESPKYFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVKQMIVAINKMDDSSVMYGQARYEEIKNEVTTYLKKVGYKPAKIPFVPISGWEGDNMIDRSTNMPWYKGPYLLEALDNLNPPKRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVGLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGYVASDSKNDPAKGTQDFTAQVIVLNHPGQIGNGYSPVLDCHTAHVACKFKEITEKMDRRSGKVLETAPKFVKSGDACMVILEPSKPMTVESFQEYPPLGRFAVRDMRQTVAVGVIKSV 429          
BLAST of EWM21485.1 vs. NCBI_GenBank
Match: gi|669142124|ref|XP_008606624.1| (elongation factor 1-alpha 1 [Saprolegnia diclina VS20] >gi|530741908|gb|EQC40150.1| elongation factor 1-alpha 1 [Saprolegnia diclina VS20])

HSP 1 Score: 771.155 bits (1990), Expect = 0.000e+0
Identity = 369/443 (83.30%), Postives = 396/443 (89.39%), Query Frame = 0
Query:    1 MGKEKVHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAELGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIDRSTNMAWYKGPTLLEALDNINPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTIAPAMVTTEVKSVEMHHESMAEALPGDNVGFNVKNVSVKEIRRGYVAGDSKKDPPAGAANFVAQVIVMNHPGQIQNGYCPVLDCHTAHVACKFAEITEKIDRRTGAVTEANPKFVQSGDGCYVTLEPSKPMVVESFTEYPPLGRFAVRDMRQTVAVGVVKSVDKKATDSKKGGAKK 443
            M KEK+H++LVVIGHVDAGKSTTTGHLIYKCGGIDKR IEKFEKEA ELGKSSFKYAWVLD LKAERERGITIDIALWKFESPKY+FT+IDAPGHRDFIKNMITGTSQAD AIL+VASG GEFEAGI K+GQTREHALLAFTLGV+QMIV +NKMDDSSV YG+AR+ EIKEEVSNYLKKVGYKPAKVPF+PISGW GDNMI++S NM WYKGP LLEALDN+NPPKRPTDK LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV   P  + TEVKSVEMHHES+ EA+PGDNVGFNVKNVSVKE+RRGYVA DSK DP  G  NF AQVIV+NHPGQI NGY PVLDCHTAHVACKF EIT+K+DRR+G V E NPKFV+SGD C V LEP+KPM VESF EYPPLGRFAVRDMRQTVAVGV+ SV KK   + KGG KK
Sbjct:    1 MPKEKIHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEALELGKSSFKYAWVLDNLKAERERGITIDIALWKFESPKYFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVRQMIVAINKMDDSSVMYGQARYEEIKEEVSNYLKKVGYKPAKVPFVPISGWEGDNMIEKSGNMPWYKGPCLLEALDNLNPPKRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVQFGPVGLQTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGYVASDSKNDPAKGTENFTAQVIVLNHPGQIGNGYSPVLDCHTAHVACKFKEITQKMDRRSGKVLEENPKFVKSGDACMVILEPTKPMTVESFQEYPPLGRFAVRDMRQTVAVGVIHSVIKKEA-AGKGGKKK 442          
BLAST of EWM21485.1 vs. NCBI_GenBank
Match: gi|1214703619|gb|OWZ15604.1| (Translation elongation factor 1-alpha [Phytophthora megakarya])

HSP 1 Score: 769.615 bits (1986), Expect = 0.000e+0
Identity = 362/430 (84.19%), Postives = 391/430 (90.93%), Query Frame = 0
Query:    1 MGKEKVHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAELGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIDRSTNMAWYKGPTLLEALDNINPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTIAPAMVTTEVKSVEMHHESMAEALPGDNVGFNVKNVSVKEIRRGYVAGDSKKDPPAGAANFVAQVIVMNHPGQIQNGYCPVLDCHTAHVACKFAEITEKIDRRTGAVTEANPKFVQSGDGCYVTLEPSKPMVVESFTEYPPLGRFAVRDMRQTVAVGVVKSVD 430
            MGKEKVH++LVVIGHVDAGKSTTTGHLIYKCGGIDKR IEKFEKEAAELGK+SFKYAWVLD LKAERERGITIDIALWKFESPKY+FT+IDAPGHRDFIKNMITGTSQAD AIL+VASG GEFEAGI K+GQTREHALLAFTLGVKQMIV +NKMDDSSV YG+AR+ EIK EV+ YLKKVGYKPAK+PF+PISGW GDNMIDRSTNM WYKGP LLEALDN+N PKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGMV T  P  ++TEVKSVEMHHES+ EA+PGDNVGFNVKNVSVKE+RRG+VA DSK DP  G  +F AQVIV+NHPGQI NGY PVLDCHTAHVACKF EITEK+DRR+G V E  PKFV+SGD C V LEPSKPM VESF EYPPLGRFAVRDMRQTVAVGV+KSV+
Sbjct:    1 MGKEKVHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKTSFKYAWVLDNLKAERERGITIDIALWKFESPKYFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVKQMIVAINKMDDSSVMYGQARYEEIKSEVTTYLKKVGYKPAKIPFVPISGWEGDNMIDRSTNMPWYKGPYLLEALDNLNAPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVGLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGFVASDSKNDPAKGTQDFTAQVIVLNHPGQIGNGYSPVLDCHTAHVACKFKEITEKMDRRSGKVLETAPKFVKSGDACMVILEPSKPMTVESFQEYPPLGRFAVRDMRQTVAVGVIKSVN 430          
BLAST of EWM21485.1 vs. NCBI_GenBank
Match: gi|1173957535|gb|OQS04040.1| (translation elongation factor 1-alpha [Thraustotheca clavata])

HSP 1 Score: 769.615 bits (1986), Expect = 0.000e+0
Identity = 360/437 (82.38%), Postives = 389/437 (89.02%), Query Frame = 0
Query:    1 MGKEKVHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAELGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIDRSTNMAWYKGPTLLEALDNINPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTIAPAMVTTEVKSVEMHHESMAEALPGDNVGFNVKNVSVKEIRRGYVAGDSKKDPPAGAANFVAQVIVMNHPGQIQNGYCPVLDCHTAHVACKFAEITEKIDRRTGAVTEANPKFVQSGDGCYVTLEPSKPMVVESFTEYPPLGRFAVRDMRQTVAVGVVKSVDKKATDSK 437
            M KEK+H++LVVIGHVDAGKSTTTGHLIYKCGGIDKR IEKFEKEA ELGKSSFKYAWVLD LKAERERGITIDIALWKFESPKY+FT+IDAPGHRDFIKNMITGTSQAD AIL+VASG GEFEAGI K+GQTREHALLAFTLGV+QMIV +NKMDDSSV YG+ R+ EIKEEV+NYLKKVGYKPAK+PF+PISGW GDNMI++S NM WYKGP LLEALDN+NPPKRPTDK LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV   P  + TEVKSVEMHHES+ EA+PGDNVGFNVKNVSVKE+RRG+VA DSK DP  G   F AQVIV+NHPGQI NGY PVLDCHTAHVACKF EIT+K+DRR+G V E NPKFV+SGD C V LEP+KPM VESF EYPPLGRFAVRDMRQTVAVGV+ SV KK    K
Sbjct:    1 MPKEKIHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEALELGKSSFKYAWVLDNLKAERERGITIDIALWKFESPKYFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVRQMIVAINKMDDSSVMYGQPRYEEIKEEVTNYLKKVGYKPAKIPFVPISGWEGDNMIEKSGNMPWYKGPCLLEALDNLNPPKRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVQFGPVGLQTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGFVASDSKNDPAKGTETFTAQVIVLNHPGQIGNGYSPVLDCHTAHVACKFKEITQKMDRRSGKVLEENPKFVKSGDACMVVLEPTKPMTVESFQEYPPLGRFAVRDMRQTVAVGVIHSVIKKEAGGK 437          
BLAST of EWM21485.1 vs. NCBI_GenBank
Match: gi|1173947670|gb|OQR95890.1| (translation elongation factor 1-alpha [Achlya hypogyna])

HSP 1 Score: 768.844 bits (1984), Expect = 0.000e+0
Identity = 368/443 (83.07%), Postives = 395/443 (89.16%), Query Frame = 0
Query:    1 MGKEKVHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAELGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIDRSTNMAWYKGPTLLEALDNINPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTIAPAMVTTEVKSVEMHHESMAEALPGDNVGFNVKNVSVKEIRRGYVAGDSKKDPPAGAANFVAQVIVMNHPGQIQNGYCPVLDCHTAHVACKFAEITEKIDRRTGAVTEANPKFVQSGDGCYVTLEPSKPMVVESFTEYPPLGRFAVRDMRQTVAVGVVKSVDKKATDSKKGGAKK 443
            M KEK+H++LVVIGHVDAGKSTTTGHLIYKCGGIDKR IEKFEKEA ELGKSSFKYAWVLD LKAERERGITIDIALWKFESPKY+FT+IDAPGHRDFIKNMITGTSQAD AIL+VASG GEFEAGI K+GQTREHALLAFTLGV+QMIV +NKMDDSSV YG+AR+ EIKEEVSNYLKKVGYKPAKVPF+PISGW GDNMI++S NM WYKGP LLEALDN+NPPKRPT+K LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV   P  + TEVKSVEMHHES+ EA+PGDNVGFNVKNVSVKE+RRGYVA DSK DP  G   F AQVIV+NHPGQI NGY PVLDCHTAHVACKF EIT+K+DRR+G V E NPKFV+SGD C V LEPSKPM VESF EYPPLGRFAVRDMRQTVAVGV+ SV KK   + KGG KK
Sbjct:    1 MPKEKIHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEALELGKSSFKYAWVLDNLKAERERGITIDIALWKFESPKYFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVRQMIVAINKMDDSSVMYGQARYEEIKEEVSNYLKKVGYKPAKVPFVPISGWEGDNMIEKSGNMPWYKGPCLLEALDNLNPPKRPTEKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVQFGPVGLQTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGYVASDSKNDPAKGTETFTAQVIVLNHPGQIGNGYSPVLDCHTAHVACKFKEITQKMDRRSGKVLEENPKFVKSGDACMVILEPSKPMTVESFQEYPPLGRFAVRDMRQTVAVGVIHSVVKKEA-AGKGGKKK 442          
BLAST of EWM21485.1 vs. NCBI_GenBank
Match: gi|669147286|ref|XP_008609205.1| (elongation factor 1-alpha 1 [Saprolegnia diclina VS20] >gi|530738801|gb|EQC37043.1| elongation factor 1-alpha 1 [Saprolegnia diclina VS20])

HSP 1 Score: 768.844 bits (1984), Expect = 0.000e+0
Identity = 368/443 (83.07%), Postives = 395/443 (89.16%), Query Frame = 0
Query:    1 MGKEKVHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAELGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIDRSTNMAWYKGPTLLEALDNINPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTIAPAMVTTEVKSVEMHHESMAEALPGDNVGFNVKNVSVKEIRRGYVAGDSKKDPPAGAANFVAQVIVMNHPGQIQNGYCPVLDCHTAHVACKFAEITEKIDRRTGAVTEANPKFVQSGDGCYVTLEPSKPMVVESFTEYPPLGRFAVRDMRQTVAVGVVKSVDKKATDSKKGGAKK 443
            M KEK+H++LVVIGHVDAGKSTTTGHLIYKCGGIDKR IEKFEKEA ELGKSSFKYAWVLD LKAERERGITIDIALWKFESPKY+FT+IDAPGHRDFIKNMITGTSQAD AIL+VASG GEFEAGI K+GQTREHALLAFTLGV+QMIV +NKMDDSSV YG+AR+ EIKEEVSNYLKKVGYKPAKVPF+PISGW GDNMI++S NM WYKGP LLEALDN+NPPKRPTDK LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV   P  + TEVKSVEMHHES+ EA+PGDNVGFNVKNVSVKE+RRGYVA DSK DP  G  NF AQVIV+NHPGQI NGY PVLDCHTAHVACKF EIT+K+DRR+G V E NPKFV+SGD C V LEP+KPM VESF EYPPLGRFAVRDMRQTVAVGV+  V KK   + KGG KK
Sbjct:    1 MPKEKIHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEALELGKSSFKYAWVLDNLKAERERGITIDIALWKFESPKYFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVRQMIVAINKMDDSSVMYGQARYEEIKEEVSNYLKKVGYKPAKVPFVPISGWEGDNMIEKSGNMPWYKGPCLLEALDNLNPPKRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVQFGPVGLQTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGYVASDSKNDPAKGTENFTAQVIVLNHPGQIGNGYSPVLDCHTAHVACKFKEITQKMDRRSGKVLEENPKFVKSGDACLVILEPTKPMTVESFQEYPPLGRFAVRDMRQTVAVGVIHGVVKKEA-AGKGGKKK 442          
The following BLAST results are available for this feature:
BLAST of EWM21485.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101715|gb|EWM21485.1|0.000e+0100.00translation elongation factor 1 [Nannochloropsis g... [more]
gi|301111276|ref|XP_002904717.1|0.000e+083.56translation elongation factor 1-alpha, putative [P... [more]
gi|298711872|emb|CBJ32893.1|0.000e+085.35EEF1A2, eukaryotic translation elongation factor 1... [more]
gi|675193323|ref|XP_008905546.1|0.000e+084.85elongation factor 1-alpha [Phytophthora parasitica... [more]
gi|675193593|ref|XP_008905681.1|0.000e+084.85elongation factor 1-alpha [Phytophthora parasitica... [more]
gi|669142124|ref|XP_008606624.1|0.000e+083.30elongation factor 1-alpha 1 [Saprolegnia diclina V... [more]
gi|1214703619|gb|OWZ15604.1|0.000e+084.19Translation elongation factor 1-alpha [Phytophthor... [more]
gi|1173957535|gb|OQS04040.1|0.000e+082.38translation elongation factor 1-alpha [Thraustothe... [more]
gi|1173947670|gb|OQR95890.1|0.000e+083.07translation elongation factor 1-alpha [Achlya hypo... [more]
gi|669147286|ref|XP_008609205.1|0.000e+083.07elongation factor 1-alpha 1 [Saprolegnia diclina V... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9206rna9206Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications