EWM21502.1, cds9173 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21502.1 vs. NCBI_GenBank
Match: gi|585101732|gb|EWM21502.1| (Alanyl-tRNA synthetase, class IIc [Nannochloropsis gaditana]) HSP 1 Score: 581.252 bits (1497), Expect = 0.000e+0 Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0 Query: 1 MPGTSYPTTQRRYLNDTYLYDISSTILAVEPMPPDTSAGSNKMPYFGLVIAETVFHPQGGGQPSDVGRVVGENGVTFFVDNVRVGENAIIYHYGTFQHEMSENEDGARCIPFRSGEKVKLEIDAARRRLHARLHSAGHALDVAVLRLGLELRPTKGYHFEDHPFVEYLGRLPADKGSSERLIEALTLKIQELIEEDIATELYSTSKAEAASILSGGVKDVAHFPEGAQVRLVSVGGNICPCGGTHVKSTKELRGVEITRIKTKKNVTKISYRISKEGKERQIS 283 MPGTSYPTTQRRYLNDTYLYDISSTILAVEPMPPDTSAGSNKMPYFGLVIAETVFHPQGGGQPSDVGRVVGENGVTFFVDNVRVGENAIIYHYGTFQHEMSENEDGARCIPFRSGEKVKLEIDAARRRLHARLHSAGHALDVAVLRLGLELRPTKGYHFEDHPFVEYLGRLPADKGSSERLIEALTLKIQELIEEDIATELYSTSKAEAASILSGGVKDVAHFPEGAQVRLVSVGGNICPCGGTHVKSTKELRGVEITRIKTKKNVTKISYRISKEGKERQIS Sbjct: 1 MPGTSYPTTQRRYLNDTYLYDISSTILAVEPMPPDTSAGSNKMPYFGLVIAETVFHPQGGGQPSDVGRVVGENGVTFFVDNVRVGENAIIYHYGTFQHEMSENEDGARCIPFRSGEKVKLEIDAARRRLHARLHSAGHALDVAVLRLGLELRPTKGYHFEDHPFVEYLGRLPADKGSSERLIEALTLKIQELIEEDIATELYSTSKAEAASILSGGVKDVAHFPEGAQVRLVSVGGNICPCGGTHVKSTKELRGVEITRIKTKKNVTKISYRISKEGKERQIS 283
BLAST of EWM21502.1 vs. NCBI_GenBank
Match: gi|553196103|ref|XP_005856270.1| (alanyl-trna synthetase, partial [Nannochloropsis gaditana CCMP526] >gi|422292784|gb|EKU20086.1| alanyl-trna synthetase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 475.322 bits (1222), Expect = 8.673e-169 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0 Query: 51 AETVFHPQGGGQPSDVGRVVGENGVTFFVDNVRVGENAIIYHYGTFQHEMSENEDGARCIPFRSGEKVKLEIDAARRRLHARLHSAGHALDVAVLRLGLELRPTKGYHFEDHPFVEYLGRLPADKGSSERLIEALTLKIQELIEEDIATELYSTSKAEAASILSGGVKDVAHFPEGAQVRLVSVGGNICPCGGTHVKSTKELRGVEITRIKTKKNVTKISYRISKEGKERQIS 283 AETVFHPQGGGQPSDVGRVVGENGVTFFVDNVRVGENAIIYHYGTFQHEMSENEDGARCIPFRSGEKVKLEIDAARRRLHARLHSAGHALDVAVLRLGLELRPTKGYHFEDHPFVEYLGRLPADKGSSERLIEALTLKIQELIEEDIATELYSTSKAEAASILSGGVKDVAHFPEGAQVRLVSVGGNICPCGGTHVKSTKELRGVEITRIKTKKNVTKISYRISKEGKERQIS Sbjct: 1 AETVFHPQGGGQPSDVGRVVGENGVTFFVDNVRVGENAIIYHYGTFQHEMSENEDGARCIPFRSGEKVKLEIDAARRRLHARLHSAGHALDVAVLRLGLELRPTKGYHFEDHPFVEYLGRLPADKGSSERLIEALTLKIQELIEEDIATELYSTSKAEAASILSGGVKDVAHFPEGAQVRLVSVGGNICPCGGTHVKSTKELRGVEITRIKTKKNVTKISYRISKEGKERQIS 233
BLAST of EWM21502.1 vs. NCBI_GenBank
Match: gi|470437770|ref|XP_004339020.1| (threonine/alanine tRNA ligase subfamily protein [Acanthamoeba castellanii str. Neff] >gi|440795895|gb|ELR17007.1| threonine/alanine tRNA ligase subfamily protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 175.252 bits (443), Expect = 4.367e-50 Identity = 111/272 (40.81%), Postives = 152/272 (55.88%), Query Frame = 0 Query: 9 TQRRYLNDTYLYDISSTILAVEPMPP--DTSAGSNKMPYFGLVIAETVFHPQGGGQPSDVGRVVGENGVTFFVDNVRVG-ENAIIYHYGTFQHEMSENEDGARCIPFRSGEKVKLEIDAARRRLHARLHSAGHALDVAVLRLGLE--LRPTKGYHFEDHPFVEYLGR-LPADKGSSERLIEALTLKIQELIEEDIATELYSTSKAEAASILSGGVKDVAHFPEGAQVRLVSVGGNI-CPCGGTHVKSTKELRGVEITRIKTKKNVTKISYRI 273 T++ Y DTY + ++ ++ V PP ++AG++ YF +V+ T+FHPQGGGQP D G V GV F V VR E+ +I H GTF + F++G++V+L+ID A+RRLHARLHSAGH LD AV L E L P KGYHF D P+VEY G +PADK S ++ L + LI E + E L G D P VR+V+V + CPCGGTHV++T E+ + I ++ KK V +ISY + Sbjct: 6 TEQAYWEDTYRFRDTAHVVQVAEHPPPRGSAAGAS---YFAVVLDRTIFHPQGGGQPFDTGVVASAAGVKFTVSEVRANREDGVIQHIGTFAEAGTT---------FQAGDEVELQIDEAKRRLHARLHSAGHLLDKAVANLFPEYNLIPDKGYHFADAPYVEYKGTFVPADKRQS--ALKRLEDECNRLIAEGSEVTVQVVHSKEEVERLCGSASDSGANPT-EPVRVVTVCAPLGCPCGGTHVQNTGEIGRIAIPKMSAKKGVVRISYTL 262
BLAST of EWM21502.1 vs. NCBI_GenBank
Match: gi|300681550|emb|CBH32647.1| (alanyl-tRNA synthetase, putative, expressed [Triticum aestivum] >gi|669027166|emb|CDM80421.1| unnamed protein product [Triticum aestivum]) HSP 1 Score: 172.94 bits (437), Expect = 3.085e-49 Identity = 106/269 (39.41%), Postives = 151/269 (56.13%), Query Frame = 0 Query: 9 TQRRYLNDTYLYDISSTILAVEPMPPDTSAGSNKMPYFGLVIAETVFHPQGGGQPSDVGRVVGE--NGVTFFVDNVRVGENAIIYHYGTFQHEMSENEDGARCIPFRSGEKVKLEIDAARRRLHARLHSAGHALDVAVLRLGLELRPTKGYHFEDHPFVEYLGRLPADKGSSERLIEALTLKIQELIEEDIATELYSTSKAEAASILSGGVKDVAHFPEGAQVRLVSVGGNI-CPCGGTHVKSTKELRGVEITRIKTKKNVTKISYRIS 274 T+ Y +D + +T+L++ G + +V+ TVFHPQGGGQP+D G +V G F V++VRV ++ +++HYG F ED A G+ V LEIDA RR+L++RLHSAGH LD + LGL L P KGYHF D P VEY G +PAD+ +++ L + ELI + + L S E A+ L GG ++ P+ + R+V G CPCGGTHV ++ +++T I+ KK VTK+SY IS Sbjct: 8 TRLAYFDDMWALRAPATVLSLH-----QEEGGRR----AVVLDATVFHPQGGGQPADTGAIVSAAGTGARFLVEDVRV-KDGVVFHYGRF-------EDAAAGEELSQGQSVSLEIDAERRKLNSRLHSAGHLLDSCMTNLGLHLEPGKGYHFPDGPSVEYKGVVPADQLQDKKI--QLEKEANELISKG-SKVLVSVFPYEEAAKLCGGALP-SYIPQDSTPRIVKFGNYPGCPCGGTHVADIADIGNLKVTNIRVKKGVTKVSYSIS 255
BLAST of EWM21502.1 vs. NCBI_GenBank
Match: gi|326502278|dbj|BAJ95202.1| (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 171.785 bits (434), Expect = 7.681e-49 Identity = 105/269 (39.03%), Postives = 150/269 (55.76%), Query Frame = 0 Query: 9 TQRRYLNDTYLYDISSTILAVEPMP--PDTSAGSNKMPYFGLVIAETVFHPQGGGQPSDVGRVVGENGVTFFVDNVRVGENAIIYHYGTFQHEMSENEDGARCIPFRSGEKVKLEIDAARRRLHARLHSAGHALDVAVLRLGLELRPTKGYHFEDHPFVEYLGRLPADKGSSERLIEALTLKIQELIEEDIATELYSTSKAEAASILSGGVKDVAHFPEGAQVRLVSVGGNI-CPCGGTHVKSTKELRGVEITRIKTKKNVTKISYRIS 274 T+ Y +D + + +L+V P P G +V+ T+FHPQGGGQP+D G +V + F V++VRV ++ +++HYG F E+ DG G+ V +EIDA RR+L++RLHSAGH LD + LGL + P KGYHF D PFVEY G +P D+ ++ L + ELI + A L S E A+ L GG ++ E + R+V G CPCGGTHV ++ +++T I+ KK VTK+SY IS Sbjct: 8 TRLAYFDDMWALRAPAAVLSVHQAPGCPQEEGGRR-----AVVLDATIFHPQGGGQPADTGVIV--SAARFLVEDVRV-KDGVVFHYGRF-----EDADGEE---LSQGQSVSMEIDADRRKLNSRLHSAGHLLDSCMTNLGLHMEPGKGYHFPDGPFVEYKGVVPTDQLQDTKI--QLEKEANELISKG-AKVLVSVFPYEEAAKLCGGALP-SYISEDSTPRIVKFGDCPGCPCGGTHVADITDIGNLKVTNIRVKKGVTKVSYSIS 256
BLAST of EWM21502.1 vs. NCBI_GenBank
Match: gi|1000816932|gb|AML47757.1| (putative alanyl-tRNA synthase [Triticum aestivum] >gi|1092917145|gb|AOZ21501.1| putative alanyl-tRNA synthetase [Triticum aestivum]) HSP 1 Score: 168.703 bits (426), Expect = 1.317e-47 Identity = 105/269 (39.03%), Postives = 153/269 (56.88%), Query Frame = 0 Query: 9 TQRRYLNDTYLYDISSTILAVEPMPPDTSAGSNKMPYFGLVIAETVFHPQGGGQPSDVGRVVGENGV--TFFVDNVRVGENAIIYHYGTFQHEMSENEDGARCIPFRSGEKVKLEIDAARRRLHARLHSAGHALDVAVLRLGLELRPTKGYHFEDHPFVEYLGRLPADKGSSERLIEALTLKIQELIEEDIATELYSTSKAEAASILSGGVKDVAHFPEGAQVRLVSVGGNI-CPCGGTHVKSTKELRGVEITRIKTKKNVTKISYRIS 274 T+ Y +D + ++T+L++ G + +V+ TVFHPQGGGQP+D G +V +G F V++VRV ++ + HYG F+ + + GA F G+ V LE+DA RR+L++RLHSAGH LD + LGL L P KGYHF D P VEY G +PAD+ +++ L + ELI + + L S E A+ L GG ++ + + R+V G CPCGGTHV ++ V++T I+ KK VTK+SY IS Sbjct: 8 TRLAYFDDMWALRATTTVLSLH-----QEEGGRR----AVVLDATVFHPQGGGQPADTGVIVSASGAGARFLVEDVRV-KDGVALHYGRFEDAAAGDGCGAD---FTQGQSVTLEVDAERRKLNSRLHSAGHLLDSCMTNLGLHLEPGKGYHFPDGPSVEYKGVVPADQLQDKKI--QLEKEANELISKG-SKVLVSVFPYEEAAKLCGGALP-SYILQDSTPRIVKFGNYPGCPCGGTHVADIADIGNVKVTNIRVKKGVTKVSYSIS 259
BLAST of EWM21502.1 vs. NCBI_GenBank
Match: gi|1149730652|ref|XP_020190630.1| (uncharacterized protein LOC109776404 [Aegilops tauschii subsp. tauschii] >gi|383100771|emb|CCG48002.1| alanyl-tRNA synthetase, putative, expressed [Triticum aestivum] >gi|475550877|gb|EMT11535.1| Alanyl-tRNA synthetase [Aegilops tauschii]) HSP 1 Score: 167.933 bits (424), Expect = 2.364e-47 Identity = 103/268 (38.43%), Postives = 152/268 (56.72%), Query Frame = 0 Query: 9 TQRRYLNDTYLYDISSTILAVEPMPPDTSAGSNKMPYFGLVIAETVFHPQGGGQPSDVGRVV-GENGVTFFVDNVRVGENAIIYHYGTFQHEMSENEDGARCIPFRSGEKVKLEIDAARRRLHARLHSAGHALDVAVLRLGLELRPTKGYHFEDHPFVEYLGRLPADKGSSERLIEALTLKIQELIEEDIATELYSTSKAEAASILSGGVKDVAHFPEGAQVRLVSVGGNI-CPCGGTHVKSTKELRGVEITRIKTKKNVTKISYRIS 274 T+ Y D + +T+L++ G + +V+ TVFHPQGGGQP+D G +V G F V++VRV ++ +++HYG F+ + + GA F G+ V LE+DA RR+L++RLHSAGH LD + LGL L P KGYHF D P VEY G +PAD+ +++ L + ELI + + L S E A+ L GG ++ + + R+V G CPCGGTHV ++ +++T I+ KK VTK+SY I+ Sbjct: 8 TRLAYFEDMWALRAPATVLSLH-----QEEGGRR----AVVLDATVFHPQGGGQPADTGVIVSASGGARFLVEDVRV-KDGVVFHYGRFEDAAAGDGCGAE---FTKGQSVTLEVDAERRKLNSRLHSAGHLLDSCMTNLGLHLEPGKGYHFPDGPSVEYKGVVPADQLQDKKI--QLEKEANELILKG-SKVLVSVFPYEEAAKLCGGALP-SYISQDSTPRIVKFGDYPGCPCGGTHVADIADIGNLKVTNIRVKKGVTKVSYSIN 258
BLAST of EWM21502.1 vs. NCBI_GenBank
Match: gi|326491881|dbj|BAJ98165.1| (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 167.548 bits (423), Expect = 2.574e-47 Identity = 103/267 (38.58%), Postives = 149/267 (55.81%), Query Frame = 0 Query: 9 TQRRYLNDTYLYDISSTILAVEPMPPDTSAGSNKMPYFGLVIAETVFHPQGGGQPSDVGRVVGENGVTFFVDNVRVGENAIIYHYGTFQHEMSENEDGARCIPFRSGEKVKLEIDAARRRLHARLHSAGHALDVAVLRLGLELRPTKGYHFEDHPFVEYLGRLPADKGSSERLIEALTLKIQELIEEDIATELYSTSKAEAASILSGGVKDVAHFPEGAQVRLVSVGGNI-CPCGGTHVKSTKELRGVEITRIKTKKNVTKISYRIS 274 T+ Y +D + + +L+V G + +V+ T+FHPQGGGQP+D G +V + F V++VRV ++ +++HYG F E+ DG G+ V +EIDA RR+L++RLHSAGH LD + LGL + P KGYHF D PFVEY G +P D+ ++ L + ELI + A L S E A+ L GG ++ E + R+V G CPCGGTHV ++ +++T I+ KK VTK+SY IS Sbjct: 8 TRLAYFDDMWALRAPAAVLSVH-----QEEGGRR----AVVLDATIFHPQGGGQPADTGVIV--SAARFLVEDVRV-KDGVVFHYGRF-----EDADGEE---LSQGQSVSMEIDADRRKLNSRLHSAGHLLDSCMTNLGLHMEPGKGYHFPDGPFVEYKGVVPTDQLQDTKI--QLEKEANELISKG-AKVLVSVFPYEEAAKLCGGALP-SYISEDSTPRIVKFGDCPGCPCGGTHVADITDIGNLKVTNIRVKKGVTKVSYSIS 250
BLAST of EWM21502.1 vs. NCBI_GenBank
Match: gi|1191679934|gb|OTG31897.1| (putative alanine-tRNA ligase [Helianthus annuus]) HSP 1 Score: 165.622 bits (418), Expect = 1.541e-46 Identity = 94/230 (40.87%), Postives = 139/230 (60.43%), Query Frame = 0 Query: 48 LVIAETVFHPQGGGQPSDVGRV--VGENGVTFFVDNVRVGENAIIYHYGTFQHEMSENEDGARCIPFRSGEKVKLEIDAARRRLHARLHSAGHALDVAVLRLGLE-LRPTKGYHFEDHPFVEYLGRLPADKGSSERLIEALTLKIQELIEEDIATELYSTSKAEAASILSGGVKDVAHFPEGAQVRLVSVGGNI-CPCGGTHVKSTKELRGVEITRIKTKKNVTKISYRI 273 L++ TVFHPQGGGQPSD G + V + F V +VR NA++YHYG F+ + E G + + L +D ++R+L++RLHSAGH LDV + ++GL L+P K YHF D P+VEY G++P + S+ ++ L L+ LI + + + E AS+L GG + P+G+ R+V +G CPCGGTHV + +L V++T++KTKK VTK+ Y I Sbjct: 36 LILDSTVFHPQGGGQPSDTGFITDVSSSRFNFIVQDVR-SRNAVVYHYGVFEKPAEDLEGGVQVV---------LSVDESKRKLYSRLHSAGHLLDVCLPKVGLSHLKPGKAYHFPDGPWVEYEGKVPQAELQSK--MQELELEANNLISRGMKVSV-AVYPYEEASMLCGGALP-EYIPKGSTPRIVKLGDFPGCPCGGTHVSNVSDLVNVKVTQMKTKKGVTKVYYTI 251
BLAST of EWM21502.1 vs. NCBI_GenBank
Match: gi|902157345|gb|KNA06115.1| (hypothetical protein SOVF_184040 [Spinacia oleracea]) HSP 1 Score: 165.236 bits (417), Expect = 2.759e-46 Identity = 95/238 (39.92%), Postives = 142/238 (59.66%), Query Frame = 0 Query: 48 LVIAETVFHPQGGGQPSDVGRVVGENG-VTFFVDNVRVGENAIIYHYGTFQHEMSENEDGARCIPFRSGEKVKLEIDAARRRLHARLHSAGHALDVAVLRLGLE-LRPTKGYHFEDHPFVEYLGRLPADKGSSERLIEALTLKIQELIEEDIATELYSTSKA--------EAASILSGGVKDVAHFPEGAQVRLVSVGGNI-CPCGGTHVKSTKELRGVEITRIKTKKNVTKISYRIS 274 L++ TVFHPQGGGQPSD G + N F VD+VR ++ I+YH+G +EN + + + G KV L++D +RR L++RLHSAGH LD+++ +GLE P K YHF D PFVEY G +P + L +K+++L E+D+ ++ K EAA I G + D + P+G R+V +G + CPCGGTHV E+R ++I++I++KK V+++ Y IS Sbjct: 38 LILDSTVFHPQGGGQPSDTGFINDLNSSFKFVVDDVR-NKDGIVYHFGN-----AENLECIDQLMIKRGTKVYLDVDESRRNLNSRLHSAGHVLDISIRNVGLEHFEPGKAYHFPDGPFVEYKGTIPQTE---------LQIKLEQL-EKDVNAQISRGQKVFVGLFPYEEAADICGGRLPD--YIPKGNSPRIVKIGEHFGCPCGGTHVADISEIRSMKISKIRSKKGVSRVFYNIS 257 The following BLAST results are available for this feature:
BLAST of EWM21502.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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