EWM21516.1, cds9157 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21516.1 vs. NCBI_GenBank
Match: gi|585101747|gb|EWM21516.1| (circadian rna-binding protein chlamy 1 subunit c1 [Nannochloropsis gaditana]) HSP 1 Score: 663.3 bits (1710), Expect = 0.000e+0 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0
Query: 1 MVTNGEHTPAEDEVQQEVQGEEQAQEEEVNAEEEDLAVPNGEGGGETESEAVGTKRPREEEDEAKEGEHAEEATAETESTGKVEEGHAVVGQPSKKQATTEARESSAETNAAFAEANQHQEVMDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVGKPEHVKNARAMIEGVMEGGPSVLADFPEVAGNSKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQSAREIIIAIMEQGVQALHQYSAGGGSSHAGGGFPSGGSGGGRGRGGGGARLYPVPVDASTWAVEVPKSQWHRP 333
MVTNGEHTPAEDEVQQEVQGEEQAQEEEVNAEEEDLAVPNGEGGGETESEAVGTKRPREEEDEAKEGEHAEEATAETESTGKVEEGHAVVGQPSKKQATTEARESSAETNAAFAEANQHQEVMDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVGKPEHVKNARAMIEGVMEGGPSVLADFPEVAGNSKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQSAREIIIAIMEQGVQALHQYSAGGGSSHAGGGFPSGGSGGGRGRGGGGARLYPVPVDASTWAVEVPKSQWHRP
Sbjct: 1 MVTNGEHTPAEDEVQQEVQGEEQAQEEEVNAEEEDLAVPNGEGGGETESEAVGTKRPREEEDEAKEGEHAEEATAETESTGKVEEGHAVVGQPSKKQATTEARESSAETNAAFAEANQHQEVMDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVGKPEHVKNARAMIEGVMEGGPSVLADFPEVAGNSKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQSAREIIIAIMEQGVQALHQYSAGGGSSHAGGGFPSGGSGGGRGRGGGGARLYPVPVDASTWAVEVPKSQWHRP 333
BLAST of EWM21516.1 vs. NCBI_GenBank
Match: gi|553186386|ref|XP_005854408.1| (far upstream binding protein [Nannochloropsis gaditana CCMP526] >gi|422294650|gb|EKU21950.1| far upstream binding protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 515.383 bits (1326), Expect = 0.000e+0 Identity = 260/267 (97.38%), Postives = 262/267 (98.13%), Query Frame = 0
Query: 1 MVTNGEHTPAEDEVQQEVQGEEQAQEEEVNAEEEDLAVPNGEGGGETESEAVGTKRPREEEDEAKEGEHAEEATAETESTGKVEEGHAVVGQPSKKQATTEARESSAETNAAFAEANQHQEVMDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVGKPEHVKNARAMIEGVMEGGPSVLADFPEVAGNSKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQSAREIII 267
MVTNGEHTPAEDEVQQEVQGEEQAQEEEVNAEEEDLAVPNGEGGGETESEAVGTKRPREEEDEAKEGEHAEEATAETESTGKVEE HAVVGQPSKKQATTEARESSAETNAAFAEANQHQEVMDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVGKPEHVKNARAMIEGVMEGGPSVLADFPEVAGNSKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQS + +
Sbjct: 1 MVTNGEHTPAEDEVQQEVQGEEQAQEEEVNAEEEDLAVPNGEGGGETESEAVGTKRPREEEDEAKEGEHAEEATAETESTGKVEEDHAVVGQPSKKQATTEARESSAETNAAFAEANQHQEVMDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVGKPEHVKNARAMIEGVMEGGPSVLADFPEVAGNSKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQSGKTFFL 267 HSP 2 Score: 73.559 bits (179), Expect = 3.131e-11 Identity = 45/117 (38.46%), Postives = 66/117 (56.41%), Query Frame = 0
Query: 194 ADFPEVAGNSKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQSAREIIIAIMEQGVQALHQYSAGGGSSHAGGGFPSGGSGGGRGRGGGGAR 310
A F E A + +D + +VGR+IGKGG+ +R+IQ +S I+QS+P +P K+TI G P+ V++AR +I +ME G L + G+S A P G G G+GG R
Sbjct: 111 AAFAE-ANQHQEVMDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVGKPEHVKNARAMIEGVMEGGPSVLADFPEVAGNSKATVDCPRGLVGRLIGKGGDIVR 226
BLAST of EWM21516.1 vs. NCBI_GenBank
Match: gi|545375741|ref|XP_005652020.1| (hypothetical protein COCSUDRAFT_64249 [Coccomyxa subellipsoidea C-169] >gi|384254002|gb|EIE27476.1| hypothetical protein COCSUDRAFT_64249 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 118.627 bits (296), Expect = 6.883e-26 Identity = 74/179 (41.34%), Postives = 107/179 (59.78%), Query Frame = 0
Query: 129 VVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVGKPEHVKNARAMIEGVMEGGP----SVLADFPEVAGNSKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQSAREIIIAIMEQGVQALHQYSAGGGSSHAGGGFPSGGSGGGRG 303
+VGRIIG+GGETIR +Q S V+DQ+ P+GEPR++ I G+P+ V+ A M+ ++ G P S++ AG ++ V CP+G+VGR+IGKGG+ ++ +Q A IQI+Q+ P K+TI G P AV+SA + I+ G L +AG G GG P G+ GG G
Sbjct: 334 IVGRIIGRGGETIRALQQASQAHIVVDQNYPEGEPRRVNISGRPDAVERAVKMVSELISGEPGSAQSIIQKVHYGAGVTR-EVQCPKGMVGRVIGKGGETIKALQKNFGANIQIDQTT---DPMKITIAGQPPAVESAAAAVTEIINGGNPYLGP-TAGAGY---GGARPGFGAPGGYG 504 HSP 2 Score: 99.3673 bits (246), Expect = 2.207e-19 Identity = 56/159 (35.22%), Postives = 97/159 (61.01%), Query Frame = 0
Query: 113 FAEANQHQEVMDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVGKP-EHVKNARAMIEGVMEGGPSVLADFPEVAGNSKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQSAREIIIAIM 270
A Q E +D+ +VG++IGKGGETI+ +Q + + ID P GE +K++I G E V+ A+ +E ++ S AG + +V+CP+G+VGR+IG+GG+ +R +Q S+A I ++Q+ P+ +P +V I+G P AV+ A +++ ++
Sbjct: 241 MAAQGQFYETIDIPAPMVGKLIGKGGETIKQLQYNTNTRVQIDHQTP-GEAKKVSIQGDSHEAVQAAKQQVEQIVSMDDSG-------AGGASQSVECPQGIVGRIIGRGGETIRALQQASQAHIVVDQNYPEGEPRRVNISGRPDAVERAVKMVSELI 391
BLAST of EWM21516.1 vs. NCBI_GenBank
Match: gi|297592144|gb|ADI46928.1| (CRB1m [Volvox carteri f. nagariensis]) HSP 1 Score: 116.316 bits (290), Expect = 2.159e-25 Identity = 76/212 (35.85%), Postives = 115/212 (54.25%), Query Frame = 0
Query: 120 QEVMDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVGKPEHVKNARAMIEGVMEGG----PSVLADFPEVAGNSKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQSAREIIIAIMEQGVQALHQYSAGG-------GSSHAGGGFPSGGSGGGRGRGGGGARLYPVPVDAST 320
QE ++ +VGR+IG+GGETIR +Q SG +++Q PDG PR++ I G + V+ A +M+ +++G S++ F S V+CP+ +VGR+IGKGG+ ++++Q + A IQI+Q PCK+TITG + V SAR I E ++A +GG +S+A F G G G GG Y +P A T
Sbjct: 205 QETVECPPGIVGRVIGRGGETIRTLQQASGAHILVNQDFPDGVPRQIVITGAQDAVQRATSMVSELIQGDQGNTQSIIQRF---GVGSTEVVECPKAMVGRVIGKGGETIKDLQKRFSASIQIDQG---STPCKITITGPAQTVSSARRAI----EDLIRAATVQPSGGTRSAPPYNTSYAHQPFNGNGPSGAYGPYGG----YNLPPTAYT 402 HSP 2 Score: 91.2781 bits (225), Expect = 9.066e-17 Identity = 51/151 (33.77%), Postives = 87/151 (57.62%), Query Frame = 0
Query: 121 EVMDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVGKPEHVKNARAMIEGVMEGGPSVLADFPEVAGNSKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQSAREIIIAIME 271
E + D VGRIIG+ G TIR+++ + + +D +P + I G+ + V+NA+ +++ ++ G + P G + TV+CP G+VGR+IG+GG+ +R +Q S A I +NQ P P ++ ITGA AVQ A ++ +++
Sbjct: 127 ETLSCPTDKVGRIIGRAGATIRELEASTNTRIQVDHKALGDKP--VIISGRRDDVENAKRVVQDLICGSNEAV---PPGTGEVQETVECPPGIVGRVIGRGGETIRTLQQASGAHILVNQDFPDGVPRQIVITGAQDAVQRATSMVSELIQ 272
BLAST of EWM21516.1 vs. NCBI_GenBank
Match: gi|552830585|ref|XP_005847940.1| (hypothetical protein CHLNCDRAFT_52074 [Chlorella variabilis] >gi|307107596|gb|EFN55838.1| hypothetical protein CHLNCDRAFT_52074 [Chlorella variabilis]) HSP 1 Score: 114.005 bits (284), Expect = 2.999e-25 Identity = 70/210 (33.33%), Postives = 112/210 (53.33%), Query Frame = 0
Query: 65 KEGEHAEEATAETESTGKVEEGHAVVGQPSKKQATTEARESSAETNAAFAEANQHQEV---MDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVGKPEHVKNARAMIEGVMEGGP-SVLADFPEVAGN----SKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQSAREII 266
K GE T++ +++ HA G + + + E+ A A A Q +E +D +VGRIIG+GGETIR +Q+ S +DQ+ P+G+PRK+ + G+P+ + A MI ++ G P S A V + CP+G+VGR+IG+ GD ++++Q + A IQI+QS PC+VT+ G P + A+ +I
Sbjct: 17 KAGETIRNLQLSTDT--RIQVDHAAEGDTKRVTISGMSAEAVARCRAEIATILQDEETKEELDCPAGIVGRIIGRGGETIRALQSASQAHITVDQNFPEGQPRKIIVQGRPDACQKASMMIRELINGEPGSAQAIIQRVCAEQGIGKTHVMSCPKGIVGRIIGRQGDTIKQLQRVTGATIQIDQS---TDPCRVTLAGQPSSSDQAKRMI 221 HSP 2 Score: 90.8929 bits (224), Expect = 5.791e-17 Identity = 51/147 (34.69%), Postives = 87/147 (59.18%), Query Frame = 0
Query: 121 EVMDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVG-KPEHVKNARAMIEGVMEGGPSVLADFPEVAGNSKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQSAREII 266
E++D+ +VG++IGK GETIR++Q + + +D + +G+ +++TI G E V RA I +++ +K +DCP G+VGR+IG+GG+ +R +Q S+A I ++Q+ P+ QP K+ + G P A Q A +I
Sbjct: 2 EILDIPSAMVGKLIGKAGETIRNLQLSTDTRIQVDHAA-EGDTKRVTISGMSAEAVARCRAEIATILQD------------EETKEELDCPAGIVGRIIGRGGETIRALQSASQAHITVDQNFPEGQPRKIIVQGRPDACQKASMMI 135
BLAST of EWM21516.1 vs. NCBI_GenBank
Match: gi|1004137328|gb|KXZ45354.1| (hypothetical protein GPECTOR_55g260 [Gonium pectorale]) HSP 1 Score: 112.464 bits (280), Expect = 5.654e-24 Identity = 60/162 (37.04%), Postives = 97/162 (59.88%), Query Frame = 0
Query: 109 TNAAFAEANQHQEVMDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVGKPEHVKNARAMIEGVMEGG----PSVLADFPEVAGNSKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQSAREII 266
T+A+ A + Q+ ++ +VGR+IG+GGETIR +Q SG +++Q P+G+PR++ I G + V A M+ ++ G +V+ F S ++CP+ +VGR+IGKGG+ ++++Q + A IQI+QS PCKVTITG + SAR +
Sbjct: 209 TDASQPVAGEVQKTLECPAGIVGRVIGRGGETIRSLQQASGAHILVNQDFPEGQPREIVITGTQDSVDRAHNMVTELIGGANVSTQTVIQRF---GVGSTEVLECPKAMVGRIIGKGGETIKDLQKRFSASIQIDQS---STPCKVTITGPGHMISSARRAV 364 HSP 2 Score: 97.8265 bits (242), Expect = 5.773e-19 Identity = 55/150 (36.67%), Postives = 88/150 (58.67%), Query Frame = 0
Query: 121 EVMDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVGKPEHVKNARAMIEGVMEGGPSVLADFPEVAGNSKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQSAREIIIAIM 270
EV+ D VGR+IG+ G TIRD++ +G + +D +P +TI GK E V+ A ++ ++ G A P VAG + T++CP G+VGR+IG+GG+ +R +Q S A I +NQ P+ QP ++ ITG +V A ++ ++
Sbjct: 140 EVVMCPPDKVGRVIGRAGATIRDLEAGTGTRIQVDHKAAGEKP--VTISGKREDVERAVKTVQDLIAGTTGTDASQP-VAGEVQKTLECPAGIVGRVIGRGGETIRSLQQASGAHILVNQDFPEGQPREIVITGTQDSVDRAHNMVTELI 286
BLAST of EWM21516.1 vs. NCBI_GenBank
Match: gi|302852888|ref|XP_002957962.1| (subunit of circadian RNA-binding protein [Volvox carteri f. nagariensis] >gi|297592090|gb|ADI46875.1| CRB1f [Volvox carteri f. nagariensis] >gi|300256728|gb|EFJ40988.1| subunit of circadian RNA-binding protein [Volvox carteri f. nagariensis]) HSP 1 Score: 109.383 bits (272), Expect = 5.821e-23 Identity = 65/181 (35.91%), Postives = 99/181 (54.70%), Query Frame = 0
Query: 106 SAETNAAFAEANQHQEVMDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVGKPEHVKNARAMIEGVMEGG--PSVLADFPEVAGNSKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQSAREIIIAIMEQGVQALHQYSAGG 284
S T N+ Q ++ +VGRIIG+GGETIR +Q SG +++Q P+G PR++ I G + V+ A +M+ ++ G + A S V+CP+ +VGR+IGKGG+ ++++Q + IQI+Q PCKVTITG + SAR I E+ ++ Q S GG
Sbjct: 191 SGATETTSPSTNEVQGTVECPPGIVGRIIGRGGETIRTLQQASGAHILVNQDFPEGVPRQIIITGAQDAVQRATSMVSELINGSNHTNTQAIIQRFGVGSTEVVECPKAMVGRIIGKGGETIKDLQKRFNVSIQIDQG---STPCKVTITGPSPLISSARRSI----EELIRTPSQPSGGG 364 HSP 2 Score: 88.5817 bits (218), Expect = 7.509e-16 Identity = 52/147 (35.37%), Postives = 82/147 (55.78%), Query Frame = 0
Query: 121 EVMDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVGKPEHVKNARAMIEGVMEGGPSVLA-DFPEVAGNSKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQSAREII 266
E + D VGRIIG+ G TIRD++ + + +D P +P + + G+ + V A+ + ++ G + EV G TV+CP G+VGR+IG+GG+ +R +Q S A I +NQ P+ P ++ ITGA AVQ A ++
Sbjct: 127 ETIMCPPDKVGRIIGRAGATIRDLEASTSTRIQVDHKAPGDKP--VVVSGRRDDVDRAKRAVHDLISGATETTSPSTNEVQG----TVECPPGIVGRIIGRGGETIRTLQQASGAHILVNQDFPEGVPRQIIITGAQDAVQRATSMV 267
BLAST of EWM21516.1 vs. NCBI_GenBank
Match: gi|40792684|gb|AAR90343.1| (circadian RNA-binding protein CHLAMY 1 subunit C1, partial [Chlamydomonas reinhardtii]) HSP 1 Score: 108.997 bits (271), Expect = 6.992e-23 Identity = 57/148 (38.51%), Postives = 93/148 (62.84%), Query Frame = 0
Query: 120 QEVMDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVGKPEHVKNARAMIEGVMEGGPSVLADFPEVAG-NSKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQSAREII 266
Q+ ++ + +VGR+IG+GGETIR +Q SG +++Q P+G R++TI G + V A +M++ ++ G + + + G S ++CP+ +VGR+IGKGG+ ++++Q + A IQI+QS PCKVTITG + SAR I
Sbjct: 179 QKTLECPQGIVGRVIGRGGETIRTLQQASGAHILVNQDFPEGAARQITISGSQDAVDRAASMVQELIGGEHANTSQVVQRFGVGSTEVLECPKTMVGRIIGKGGETIKDLQKRFNASIQIDQSA---MPCKVTITGPSHTIASARRAI 323 HSP 2 Score: 92.8189 bits (229), Expect = 2.984e-17 Identity = 51/146 (34.93%), Postives = 87/146 (59.59%), Query Frame = 0
Query: 121 EVMDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVGKPEHVKNARAMIEGVMEGGPSVLADFPEVAGNSKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQSAREII 266
E + D VGR+IG+ G TIRD++ +G + +D P +P +TI G+ + V+ A+ + ++ G S A P G ++ T++CP+G+VGR+IG+GG+ +R +Q S A I +NQ P+ ++TI+G+ AV A ++
Sbjct: 101 ETIMCPPDKVGRVIGRAGATIRDLEASTGTRIQVDHKAPGDKP--VTISGRADEVERAKRQVLDLISGHGSDAAPAP---GEAQKTLECPQGIVGRVIGRGGETIRTLQQASGAHILVNQDFPEGAARQITISGSQDAVDRAASMV 241
BLAST of EWM21516.1 vs. NCBI_GenBank
Match: gi|159476646|ref|XP_001696422.1| (C1, subunit of the circadian RNA-binding protein CHLAMY 1 [Chlamydomonas reinhardtii] >gi|158282647|gb|EDP08399.1| C1, subunit of the circadian RNA-binding protein CHLAMY 1 [Chlamydomonas reinhardtii]) HSP 1 Score: 108.997 bits (271), Expect = 7.547e-23 Identity = 57/148 (38.51%), Postives = 93/148 (62.84%), Query Frame = 0
Query: 120 QEVMDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVGKPEHVKNARAMIEGVMEGGPSVLADFPEVAG-NSKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQSAREII 266
Q+ ++ + +VGR+IG+GGETIR +Q SG +++Q P+G R++TI G + V A +M++ ++ G + + + G S ++CP+ +VGR+IGKGG+ ++++Q + A IQI+QS PCKVTITG + SAR I
Sbjct: 202 QKTLECPQGIVGRVIGRGGETIRTLQQASGAHILVNQDFPEGAARQITISGSQDAVDRAASMVQELIGGEHANTSQVVQRFGVGSTEVLECPKTMVGRIIGKGGETIKDLQKRFNASIQIDQSA---MPCKVTITGPSHTIASARRAI 346 HSP 2 Score: 92.8189 bits (229), Expect = 2.594e-17 Identity = 51/146 (34.93%), Postives = 87/146 (59.59%), Query Frame = 0
Query: 121 EVMDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVGKPEHVKNARAMIEGVMEGGPSVLADFPEVAGNSKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQSAREII 266
E + D VGR+IG+ G TIRD++ +G + +D P +P +TI G+ + V+ A+ + ++ G S A P G ++ T++CP+G+VGR+IG+GG+ +R +Q S A I +NQ P+ ++TI+G+ AV A ++
Sbjct: 124 ETIMCPPDKVGRVIGRAGATIRDLEASTGTRIQVDHKAPGDKP--VTISGRADEVERAKRQVLDLISGHGSDAAPAP---GEAQKTLECPQGIVGRVIGRGGETIRTLQQASGAHILVNQDFPEGAARQITISGSQDAVDRAASMV 264
BLAST of EWM21516.1 vs. NCBI_GenBank
Match: gi|693496189|emb|CEG00713.1| (K Homology domain, type 1 [Ostreococcus tauri]) HSP 1 Score: 107.842 bits (268), Expect = 1.040e-22 Identity = 62/173 (35.84%), Postives = 100/173 (57.80%), Query Frame = 0
Query: 123 MDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEPRKLTIVGKPEHVKNARAMIEGVMEGGPSVLADFPEVAGNSKATVDCPRGLVGRLIGKGGDIVREIQYKSKAVIQINQSLPQDQPCKVTITGAPKAVQSAREIIIAIMEQGVQALHQYSAGGGSSHAGGGFPS 295
++ + +VGRIIG+GGETI+ +Q SG IDQS DGEP+++TI G + V A ++E ++ G + + G +++CP+ VG++IG+GG+ +R IQ + A +QI+Q+ QPC V + GA V + +++ I+E G A+ A GG G G+ S
Sbjct: 158 LECPQSMVGRIIGRGGETIKSLQATSGAHVAIDQSGADGEPKRVTISGTRKSVDAASELVENLLL-GTGAMGGMLVIPGQITRSIECPKERVGKIIGRGGETIRGIQAATGARLQIDQTR---QPCVVMMAGAEACVDACTQVVNEILEGGSTAVFNEIARGGQ---GFGYAS 323 The following BLAST results are available for this feature:
BLAST of EWM21516.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|