EWM21526.1, cds9154 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21526.1 vs. NCBI_GenBank
Match: gi|585101759|gb|EWM21526.1| (hypothetical protein Naga_100204g9 [Nannochloropsis gaditana]) HSP 1 Score: 449.899 bits (1156), Expect = 7.886e-160 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
Query: 1 MRNVIALVLLAAQLPAVPALLSFTNPPPKQPALHFRPGLPTDNPLIRQSMLEARMNPAFLKPEYFTIAEHPGPNAGTGRATTAGFGQIRPILGTGGQVCELASVYVLPASRKQRIGSRIIARLVENFRADNSRARQVPSSSQSVPTPRLVLLTLADTAPFYSSHGFFVLPDPVRAKPPLPMLFVLEYLAGSVVARLSRGPATKLVCMELQEGGNSWRIAAKRTN 224
MRNVIALVLLAAQLPAVPALLSFTNPPPKQPALHFRPGLPTDNPLIRQSMLEARMNPAFLKPEYFTIAEHPGPNAGTGRATTAGFGQIRPILGTGGQVCELASVYVLPASRKQRIGSRIIARLVENFRADNSRARQVPSSSQSVPTPRLVLLTLADTAPFYSSHGFFVLPDPVRAKPPLPMLFVLEYLAGSVVARLSRGPATKLVCMELQEGGNSWRIAAKRTN
Sbjct: 1 MRNVIALVLLAAQLPAVPALLSFTNPPPKQPALHFRPGLPTDNPLIRQSMLEARMNPAFLKPEYFTIAEHPGPNAGTGRATTAGFGQIRPILGTGGQVCELASVYVLPASRKQRIGSRIIARLVENFRADNSRARQVPSSSQSVPTPRLVLLTLADTAPFYSSHGFFVLPDPVRAKPPLPMLFVLEYLAGSVVARLSRGPATKLVCMELQEGGNSWRIAAKRTN 224
BLAST of EWM21526.1 vs. NCBI_GenBank
Match: gi|553184628|ref|XP_005854123.1| (hypothetical protein NGA_2041000 [Nannochloropsis gaditana CCMP526] >gi|422294934|gb|EKU22234.1| hypothetical protein NGA_2041000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 445.277 bits (1144), Expect = 4.570e-158 Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0
Query: 1 MRNVIALVLLAAQLPAVPALLSFTNPPPKQPALHFRPGLPTDNPLIRQSMLEARMNPAFLKPEYFTIAEHPGPNAGTGRATTAGFGQIRPILGTGGQVCELASVYVLPASRKQRIGSRIIARLVENFRADNSRARQVPSSSQSVPTPRLVLLTLADTAPFYSSHGFFVLPDPVRAKPPLPMLFVLEYLAGSVVARLSRGPATKLVCMELQEGGNSWRIAAKRTN 224
MRNVIALVLLAAQLPAVPALLSFTNPPPKQPALHFRPGLPTDNPLIRQSMLEARMNPAFLKPEYFTIAEHPGPNAGTGRATTAGFGQIRPILGTGGQVCELASVYVLPASRKQRIGSRIIARLVENFRADNSRARQVPSSSQSVPTPRLVLLTLADTAPFYSSHGFFVLPDPVRAKPPLPMLFVLEYLAGSVVARLSRGPATKLVCMELQEGGNS RIAAKRTN
Sbjct: 1 MRNVIALVLLAAQLPAVPALLSFTNPPPKQPALHFRPGLPTDNPLIRQSMLEARMNPAFLKPEYFTIAEHPGPNAGTGRATTAGFGQIRPILGTGGQVCELASVYVLPASRKQRIGSRIIARLVENFRADNSRARQVPSSSQSVPTPRLVLLTLADTAPFYSSHGFFVLPDPVRAKPPLPMLFVLEYLAGSVVARLSRGPATKLVCMELQEGGNSGRIAAKRTN 224
BLAST of EWM21526.1 vs. NCBI_GenBank
Match: gi|551625775|ref|XP_005792994.1| (hypothetical protein EMIHUDRAFT_222679 [Emiliania huxleyi CCMP1516] >gi|485647403|gb|EOD40565.1| hypothetical protein EMIHUDRAFT_222679 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 78.5666 bits (192), Expect = 1.226e-14 Identity = 65/178 (36.52%), Postives = 85/178 (47.75%), Query Frame = 0
Query: 32 ALHFRPGLPTDNPLIRQSMLEARMNPAFLKPEYFTIAEHPGPNAGTGRATTAGFGQIRPILGTGGQVCELASVYVLPASRKQRIGSRIIARLVENFR--ADNSRARQVPSSSQSVPTPRLVLLTLADTAPFYSSHGFFVLPDPVRAKPPLPMLFVLEYLAGSVVARLSRGPATKLVCM 207
AL RP P++ P++ ++ RMNP + PE F +A PN A FGQIRP+ G ELAS+ V P R +G+ + A+L+ R AD+S+ L L+TL T PFY GF + P P LE AGSVVARL+ G LVCM
Sbjct: 24 ALAVRPAAPSEAPVLLSRLVRERMNPLSVDPERFLVAWDE-PNG------IAAFGQIRPL---GSDASELASLVVEPRYRGLGVGTMLAAKLLARHRSGADSSKP--------------LYLVTLQRTQPFYERLGFAPVSSP-------PTEMRLEVAAGSVVARLAAG--QNLVCM 168
BLAST of EWM21526.1 vs. NCBI_GenBank
Match: gi|551545831|ref|XP_005760880.1| (hypothetical protein EMIHUDRAFT_249102 [Emiliania huxleyi CCMP1516] >gi|485609459|gb|EOD08451.1| hypothetical protein EMIHUDRAFT_249102 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 78.5666 bits (192), Expect = 1.320e-14 Identity = 65/178 (36.52%), Postives = 85/178 (47.75%), Query Frame = 0
Query: 32 ALHFRPGLPTDNPLIRQSMLEARMNPAFLKPEYFTIAEHPGPNAGTGRATTAGFGQIRPILGTGGQVCELASVYVLPASRKQRIGSRIIARLVENFR--ADNSRARQVPSSSQSVPTPRLVLLTLADTAPFYSSHGFFVLPDPVRAKPPLPMLFVLEYLAGSVVARLSRGPATKLVCM 207
AL RP P++ P++ ++ RMNP + PE F +A PN A FGQIRP+ G ELAS+ V P R +G+ + A+L+ R AD+S+ L L+TL T PFY GF + P P LE AGSVVARL+ G LVCM
Sbjct: 25 ALAVRPAAPSEAPVLLSRLVRERMNPLSVDPERFLVAWDE-PNG------IAAFGQIRPL---GSDASELASLVVEPRYRGLGVGTMLAAKLLARHRSGADSSKP--------------LYLVTLQRTQPFYERLGFAPVSSP-------PTEMRLEVAAGSVVARLAAG--QNLVCM 169
BLAST of EWM21526.1 vs. NCBI_GenBank
Match: gi|299115731|emb|CBN74296.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 77.411 bits (189), Expect = 6.362e-14 Identity = 61/198 (30.81%), Postives = 89/198 (44.95%), Query Frame = 0
Query: 16 AVP--ALLSFTNPPPKQPA-LHFRPGLPTDNPLIRQSMLEARMNPAFLKPEYFTIAEHPGPNAGTGRATTAGFGQIRPILGTGGQVCELASVYVLPASRKQRIGSRIIARLVENFRADNSRARQVPSSSQSVPTPRLVLLTLADTAPFYSSHGFFVLPDPVRAKPPLPMLFVLEYLAGSVVARLSRGPATKLVCMELQ 210
AVP A + + P P LHFRP T+ I++ ++ MNP + F AE G GFGQ+RPI GG ELAS++V + R + IGS ++ +LV+ + + + + L LLTL T PFY +GF V P +P + E GS++ +VCM+ Q
Sbjct: 30 AVPSAATCRYASQEPTTPGELHFRPAAKTEQGTIQKILVGMLMNPMSIDISNFICAEQEG--------ALVGFGQVRPI---GGSSYELASLHVDESYRGRGIGSSVVRQLVKGYVSTHGEGQ----------IRNLFLLTLESTVPFYEKNGFAVAP-----ANEIPTVLKAERAVGSLLQSFF---GNSVVCMQAQ 198
BLAST of EWM21526.1 vs. NCBI_GenBank
Match: gi|873222596|emb|CEM31012.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 76.6406 bits (187), Expect = 1.268e-13 Identity = 58/159 (36.48%), Postives = 76/159 (47.80%), Query Frame = 0
Query: 36 RPGLPTDNPLIRQSMLEARMNPAFLKPEYFTIAEHPGPNAGTGRATTAGFGQIRPILGTGGQVCELASVYVLPASRKQRIGSRIIARLVENFRADNSRARQVPSSSQSVPTPRLVLLTLADTAPFYSSHGFFVLPDPVRAKPPLPMLFVLEYLAGSVVA 194
R G +D IR + MNP FL+ E F AE G GFGQ+RP+ G GG E+AS++V A R + IGS I+ RL+E A + L LLTL+ T PF+ GF ++ A LP L LE AG++VA
Sbjct: 60 RQGDESDLSKIRLVLASQLMNPLFLQAERFVCAEMDGR--------LIGFGQVRPLDGGGGSF-EVASLFVDEAERGKGIGSAIVRRLLERHGAKGT----------------LYLLTLSKTTPFWERFGFRLVGSDEDA--SLPALLRLERSAGTLVA 191
BLAST of EWM21526.1 vs. NCBI_GenBank
Match: gi|544218245|ref|XP_005539266.1| (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >gi|449019828|dbj|BAM83230.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 72.4034 bits (176), Expect = 4.773e-12 Identity = 58/163 (35.58%), Postives = 76/163 (46.63%), Query Frame = 0
Query: 36 RPGLPTDNPLIRQSMLEARMNPAFLKPEYFTIAEHPGPNAGTGRATTAGFGQIRPILGTGGQVCELASVYVLPASRKQRIGSRIIARLVENFRADNSRARQVPSSSQSVPTPRLVLLTLADTAPFYSSHGF--FVLPDPVRAKPPLPMLFVLEYLAGSVVARL 196
R G P D +I +S+L MNP ++ E F + E + + + GFGQ+RP+ T ELASVYV PA R++ I SRI+A L+E R R + S S P R + YS GF F L +P E LAG VVA L
Sbjct: 48 RRGSPADRGVIFRSILSEGMNPLGIRTERFLVVEEK--DFQSQKNQIVGFGQLRPLSATD---LELASVYVAPAYRRRGIASRIVAHLLEEQR------RSLHSVSG--PKKRRIFCLTVGNESLYSRAGFTRFPLDQNFIWNSDIPCGLRFEMLAGRVVAAL 197
BLAST of EWM21526.1 vs. NCBI_GenBank
Match: gi|873222598|emb|CEM31014.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 68.1662 bits (165), Expect = 3.882e-11 Identity = 51/140 (36.43%), Postives = 66/140 (47.14%), Query Frame = 0
Query: 55 MNPAFLKPEYFTIAEHPGPNAGTGRATTAGFGQIRPILGTGGQVCELASVYVLPASRKQRIGSRIIARLVENFRADNSRARQVPSSSQSVPTPRLVLLTLADTAPFYSSHGFFVLPDPVRAKPPLPMLFVLEYLAGSVVA 194
MNP FL+ E F AE G GFGQ+RP+ G GG E+AS+ V A R + IGS I+ RL+E + L LLTL+ T PF+ GF ++ LP L LE AG++VA
Sbjct: 1 MNPLFLQAERFVCAEMDGR--------LIGFGQVRPLDGGGGSF-EVASLLVDEAERGKGIGSAIVRRLLERHGTKGT----------------LYLLTLSKTTPFWERFGFRLVGSD--QDTSLPALLRLERSAGTLVA 113
BLAST of EWM21526.1 vs. NCBI_GenBank
Match: gi|219115675|ref|XP_002178633.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410368|gb|EEC50298.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 69.3218 bits (168), Expect = 4.560e-11 Identity = 54/176 (30.68%), Postives = 81/176 (46.02%), Query Frame = 0
Query: 32 ALHFRPGLPTDNPLIRQSMLEARMNPAFLKPEYFTIAEHPGPNAGTGRATTAGFGQIRPILGTGGQVCELASVYVLPASRKQRIGSRIIARLVENFRADNSRARQVPSSSQSVPTPRLVLLTLADTAPFYSSHGFFVLPDPVRAKPPLPMLFVLEYLAGSVVARLSRGPATKLVCM 207
++ +R D + R+ + + MNP + + +A + G T GFGQIRP+ + ELAS++V P R Q IG+ ++ L++ R D S P + LLTL T+ FY HGF + + K LP E+ AGS+ LS +LVCM
Sbjct: 26 SVRYRSANANDVLVARKILFQEAMNPLSVTQNHLVVAFDQDRD---GEDTLLGFGQIRPV---DERFAELASLFVHPDWRGQGIGTALVFELLQ--RHDQC----------SNPDTDVCLLTLRSTSQFYKLHGFMTIEES-EVKINLPPALRFEFAAGSL---LSTFLGNELVCM 179
BLAST of EWM21526.1 vs. NCBI_GenBank
Match: gi|255080430|ref|XP_002503795.1| (predicted protein [Micromonas commoda] >gi|226519062|gb|ACO65053.1| predicted protein [Micromonas commoda]) HSP 1 Score: 62.7734 bits (151), Expect = 1.964e-8 Identity = 54/174 (31.03%), Postives = 77/174 (44.25%), Query Frame = 0
Query: 19 ALLSF-TNPPPKQPALHFRPGLPTDNPLIRQSMLEARMNPAFLKPEYFTIAEHPGPNAGTGRATTAGFGQIRP-----------ILGT-----------GGQVCELASVYVLPASRKQRIGSRIIARLVENFRADNSRARQVPSSSQSVPTPRLVLLTLADTAPFYSSHGFFVL 169
AL SF T+P L R G D IR ++L +MNP L P F +AE G GFGQ++P +G GQ+ ELAS+ V+P R + +G+ ++ RL+E D+ A+ + + T + LLTL T FY GF V+
Sbjct: 28 ALRSFATSPRADIAGLTLRRGNEGDANTIRLAILREKMNPLGLDPRRFVVAEEDG--------RVVGFGQLKPWETLSNRPKGDFVGNVVRMLNLQPNWRGQLLELASLVVMPEHRGRGVGTALLNRLIE----DSINAKDPETLLKQETT--VCLLTLKSTVGFYERAGFSVI 187 The following BLAST results are available for this feature:
BLAST of EWM21526.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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