EWM21536.1, cds9138 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21536.1 vs. NCBI_GenBank
Match: gi|585101775|gb|EWM21536.1| (pcs60p [Nannochloropsis gaditana]) HSP 1 Score: 275.789 bits (704), Expect = 6.820e-94 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
Query: 1 MHECFLWLCAQTTHQRHRTYTKSMASTFVAPRTLRDVPHAESYPPGHSALVIPATPETPSYEVSYTALAHAVATVGKQLIPLLPAEKSEKVVALAMPNTLAFPLGFLGAIYGGAAMAPLNPDYKEEEFRFYLEA 134
MHECFLWLCAQTTHQRHRTYTKSMASTFVAPRTLRDVPHAESYPPGHSALVIPATPETPSYEVSYTALAHAVATVGKQLIPLLPAEKSEKVVALAMPNTLAFPLGFLGAIYGGAAMAPLNPDYKEEEFRFYLEA
Sbjct: 1 MHECFLWLCAQTTHQRHRTYTKSMASTFVAPRTLRDVPHAESYPPGHSALVIPATPETPSYEVSYTALAHAVATVGKQLIPLLPAEKSEKVVALAMPNTLAFPLGFLGAIYGGAAMAPLNPDYKEEEFRFYLEA 134
BLAST of EWM21536.1 vs. NCBI_GenBank
Match: gi|636590473|ref|XP_008026575.1| (hypothetical protein SETTUDRAFT_184936 [Setosphaeria turcica Et28A] >gi|482808919|gb|EOA85780.1| hypothetical protein SETTUDRAFT_184936 [Setosphaeria turcica Et28A]) HSP 1 Score: 60.8474 bits (146), Expect = 2.868e-8 Identity = 38/105 (36.19%), Postives = 58/105 (55.24%), Query Frame = 0
Query: 29 VAPRTLRDVPHAESYPPGHSALVIPATPETPSYEVSYTALAHAVATVGKQLIPLLPAEKSEKVVALAMPNTLAFPLGFLGAIYGGAAMAPLNPDYKEEEFRFYLE 133
++P TL HA S +A+++P +P + VSY LA V +QL + +E V++A+PNT F + F+ A + A APLNP YK+ EF FY++
Sbjct: 1 MSPTTLE---HAFSKDSSSTAVIVPGSP---ALTVSYKKLAADVKAFQQQLAKV--GVSAEAAVSIALPNTYEFIVSFIAASWQRAIAAPLNPAYKQSEFEFYID 97
BLAST of EWM21536.1 vs. NCBI_GenBank
Match: gi|1026272938|gb|OAD05945.1| (hypothetical protein MUCCIDRAFT_155197 [Mucor circinelloides f. lusitanicus CBS 277.49]) HSP 1 Score: 60.4622 bits (145), Expect = 5.144e-8 Identity = 29/89 (32.58%), Postives = 52/89 (58.43%), Query Frame = 0
Query: 47 HSALVIPATPETPSYEVSYTALAHAVATVGKQLIPLLPAEK--SEKVVALAMPNTLAFPLGFLGAIYGGAAMAPLNPDYKEEEFRFYLE 133
H A++IP + + PS +++Y + + ++L +PA+ + ++++ PN+ F + FLGA + +PLNP Y E+EF FYLE
Sbjct: 17 HPAIIIPQSADVPS-KITYNQMLDIIYDFSRKLAAQVPAKALAPGRSISISYPNSFEFSVAFLGATFMNLVASPLNPAYTEDEFNFYLE 104
BLAST of EWM21536.1 vs. NCBI_GenBank
Match: gi|928512285|ref|XP_014074945.1| (hypothetical protein COCC4DRAFT_53356 [Bipolaris maydis ATCC 48331] >gi|452003983|gb|EMD96439.1| hypothetical protein COCHEDRAFT_1162079 [Bipolaris maydis C5] >gi|477583941|gb|ENI01036.1| hypothetical protein COCC4DRAFT_53356 [Bipolaris maydis ATCC 48331]) HSP 1 Score: 60.077 bits (144), Expect = 6.908e-8 Identity = 38/105 (36.19%), Postives = 57/105 (54.29%), Query Frame = 0
Query: 29 VAPRTLRDVPHAESYPPGHSALVIPATPETPSYEVSYTALAHAVATVGKQLIPLLPAEKSEKVVALAMPNTLAFPLGFLGAIYGGAAMAPLNPDYKEEEFRFYLE 133
++P TL A S +A+++P TP + VSY LA V +QL + +E V++A+PNT F + F+ A + A APLNP YK+ EF FY++
Sbjct: 1 MSPTTLE---QAFSKDSSSTAIIVPGTP---ALTVSYKKLAADVKAFQQQLAKV--GVSAEAAVSIALPNTYEFIVSFIAASWQRAIAAPLNPAYKQSEFEFYID 97
BLAST of EWM21536.1 vs. NCBI_GenBank
Match: gi|189196774|ref|XP_001934725.1| (2-succinylbenzoate-CoA ligase [Pyrenophora tritici-repentis Pt-1C-BFP] >gi|187980604|gb|EDU47230.1| 2-succinylbenzoate-CoA ligase [Pyrenophora tritici-repentis Pt-1C-BFP]) HSP 1 Score: 60.077 bits (144), Expect = 6.980e-8 Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 0
Query: 29 VAPRTLRDVPHAESYPPGHSALVIPATPETPSYEVSYTALAHAVATVGKQLIPLLPAEKSEKVVALAMPNTLAFPLGFLGAIYGGAAMAPLNPDYKEEEFRFYLE 133
++P TL HA S +A+++P +P + VSY LA V + ++L + +E V++A+PNT F + F+ A + A APLNP YK+ EF FY++
Sbjct: 1 MSPTTLE---HAFSKDSSSTAIIVPGSP---ALTVSYKKLAVDVKSFQQKLAKV--GVSAEAAVSIALPNTYEFIVSFIAASWQRAIAAPLNPAYKQSEFEFYID 97
BLAST of EWM21536.1 vs. NCBI_GenBank
Match: gi|511008265|gb|EPB89534.1| (hypothetical protein HMPREF1544_03618 [Mucor circinelloides f. circinelloides 1006PhL]) HSP 1 Score: 59.6918 bits (143), Expect = 7.500e-8 Identity = 29/89 (32.58%), Postives = 51/89 (57.30%), Query Frame = 0
Query: 47 HSALVIPATPETPSYEVSYTALAHAVATVGKQLIPLLPAEK--SEKVVALAMPNTLAFPLGFLGAIYGGAAMAPLNPDYKEEEFRFYLE 133
H A++IP + + PS +++Y + + ++L +PA + ++++ PN+ F + FLGA + +PLNP Y E+EF FYLE
Sbjct: 17 HPAIIIPQSADVPS-KITYNQMLDIIYDFSRKLAAQVPASALAPGRSISISYPNSFEFSVAFLGATFMNLVASPLNPAYTEDEFNFYLE 104
BLAST of EWM21536.1 vs. NCBI_GenBank
Match: gi|758352063|dbj|GAN05822.1| (peroxisomal-coenzyme A synthetase [Mucor ambiguus]) HSP 1 Score: 59.6918 bits (143), Expect = 8.261e-8 Identity = 29/89 (32.58%), Postives = 51/89 (57.30%), Query Frame = 0
Query: 47 HSALVIPATPETPSYEVSYTALAHAVATVGKQLIPLLPAEK--SEKVVALAMPNTLAFPLGFLGAIYGGAAMAPLNPDYKEEEFRFYLE 133
H A++IP + + PS +++Y + + ++L +PA + ++++ PN+ F + FLGA + +PLNP Y E+EF FYLE
Sbjct: 17 HPAIIIPQSADVPS-KITYNQMLDIIYDFSRKLAAQVPASALAPGRSISISYPNSFEFSVAFLGATFMNLVASPLNPAYTEDEFNFYLE 104
BLAST of EWM21536.1 vs. NCBI_GenBank
Match: gi|396461959|ref|XP_003835591.1| (hypothetical protein LEMA_P049320.1 [Leptosphaeria maculans JN3] >gi|312212142|emb|CBX92226.1| hypothetical protein LEMA_P049320.1 [Leptosphaeria maculans JN3]) HSP 1 Score: 56.6102 bits (135), Expect = 1.170e-7 Identity = 34/105 (32.38%), Postives = 57/105 (54.29%), Query Frame = 0
Query: 29 VAPRTLRDVPHAESYPPGHSALVIPATPETPSYEVSYTALAHAVATVGKQLIPLLPAEKSEKVVALAMPNTLAFPLGFLGAIYGGAAMAPLNPDYKEEEFRFYLE 133
++P TL++ +S +A+++P P VSY L+ V ++L + +E V++A+PNT F + F+ A + A APLNP YK+ EF FY++
Sbjct: 1 MSPTTLQNAFSKDS---TTTAIIVPGNPP---LSVSYQKLSADVKAFQEKLAQV--GVSAEAAVSIALPNTYEFIVSFIAASWQRAIAAPLNPAYKQSEFEFYID 97
BLAST of EWM21536.1 vs. NCBI_GenBank
Match: gi|557725757|dbj|GAD95547.1| (peroxisomal-coenzyme A synthetase [Byssochlamys spectabilis No. 5]) HSP 1 Score: 59.3066 bits (142), Expect = 1.246e-7 Identity = 33/86 (38.37%), Postives = 51/86 (59.30%), Query Frame = 0
Query: 48 SALVIPATPETPSYEVSYTALAHAVATVGKQLIPLLPAEKSEKVVALAMPNTLAFPLGFLGAIYGGAAMAPLNPDYKEEEFRFYLE 133
+A+++P+ P+ + VSY L AVAT +L L + V++A+PN+ F + FL A + APLNP YK+EEF FY++
Sbjct: 15 TAIIVPSKPQ--ALTVSYKQLNSAVATFQAKLAKL--GIRPGDAVSIALPNSYEFIVSFLAASWQRGIAAPLNPAYKQEEFEFYID 96
BLAST of EWM21536.1 vs. NCBI_GenBank
Match: gi|909994932|gb|KNG52358.1| (acetyl-CoA synthetase-like protein [Stemphylium lycopersici]) HSP 1 Score: 59.3066 bits (142), Expect = 1.259e-7 Identity = 37/105 (35.24%), Postives = 57/105 (54.29%), Query Frame = 0
Query: 29 VAPRTLRDVPHAESYPPGHSALVIPATPETPSYEVSYTALAHAVATVGKQLIPLLPAEKSEKVVALAMPNTLAFPLGFLGAIYGGAAMAPLNPDYKEEEFRFYLE 133
++P TL HA + +A+++P P + VSY LA V +QL + +E V++A+PNT F + F+ A + A APLNP YK+ EF FY++
Sbjct: 1 MSPTTLE---HAFAKDSSSTAIIVPGNP---ALTVSYKKLAVDVKAFQQQLAKV--GVSAEAAVSIALPNTYEFIVSFIAASWQRAIAAPLNPAYKQSEFEFYID 97 The following BLAST results are available for this feature:
BLAST of EWM21536.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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