EWM21560.1, cds9112 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21560.1 vs. NCBI_GenBank
Match: gi|585101814|gb|EWM21560.1| (Fibronectin-binding A protein [Nannochloropsis gaditana]) HSP 1 Score: 375.17 bits (962), Expect = 1.329e-131 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
Query: 1 MVKTKFTTPDVRAMVRDLRTKVLGLKVVNIYDIDNRTYTFKLAVPGGEKVTLLLESGARFHTTAYARERSVPGELPNVFAMKLRKYLRGKGLEDVRQLGMDRVVVFRFGQGEGALHLILELYASGNLVLTDANYLILALLRTHQYDQGPEKAVDGEVVGKDAEAGAARGSRRMRAPSRTPPRGWQ 185
MVKTKFTTPDVRAMVRDLRTKVLGLKVVNIYDIDNRTYTFKLAVPGGEKVTLLLESGARFHTTAYARERSVPGELPNVFAMKLRKYLRGKGLEDVRQLGMDRVVVFRFGQGEGALHLILELYASGNLVLTDANYLILALLRTHQYDQGPEKAVDGEVVGKDAEAGAARGSRRMRAPSRTPPRGWQ
Sbjct: 1 MVKTKFTTPDVRAMVRDLRTKVLGLKVVNIYDIDNRTYTFKLAVPGGEKVTLLLESGARFHTTAYARERSVPGELPNVFAMKLRKYLRGKGLEDVRQLGMDRVVVFRFGQGEGALHLILELYASGNLVLTDANYLILALLRTHQYDQGPEKAVDGEVVGKDAEAGAARGSRRMRAPSRTPPRGWQ 185
BLAST of EWM21560.1 vs. NCBI_GenBank
Match: gi|553178766|ref|XP_005852602.1| (zinc knuckle (cchc-type) family protein, partial [Nannochloropsis gaditana CCMP526] >gi|422295934|gb|EKU23233.1| zinc knuckle (cchc-type) family protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 335.88 bits (860), Expect = 6.889e-113 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
Query: 1 MVKTKFTTPDVRAMVRDLRTKVLGLKVVNIYDIDNRTYTFKLAVPGGEKVTLLLESGARFHTTAYARERSVPGELPNVFAMKLRKYLRGKGLEDVRQLGMDRVVVFRFGQGEGALHLILELYASGNLVLTDANYLILALLRTHQYDQGPEKAVDGEVVGKDAEAGA 166
MVKTKFTTPDVRAMVRDLRTKVLGLKVVNIYDIDNRTYTFKLAVPGGEKVTLLLESGARFHTTAYARERSVPGELPNVFAMKLRKYLRGKGLEDVRQLGMDRVVVFRFGQGEGALHLILELYASGNLVLTDANYLILALLRTHQYDQGPEKAVDGEVVGKDAEAGA
Sbjct: 1 MVKTKFTTPDVRAMVRDLRTKVLGLKVVNIYDIDNRTYTFKLAVPGGEKVTLLLESGARFHTTAYARERSVPGELPNVFAMKLRKYLRGKGLEDVRQLGMDRVVVFRFGQGEGALHLILELYASGNLVLTDANYLILALLRTHQYDQGPEKAVDGEVVGKDAEAGA 166
BLAST of EWM21560.1 vs. NCBI_GenBank
Match: gi|669156252|ref|XP_008613688.1| (hypothetical protein SDRG_09524 [Saprolegnia diclina VS20] >gi|530734760|gb|EQC33002.1| hypothetical protein SDRG_09524 [Saprolegnia diclina VS20]) HSP 1 Score: 164.081 bits (414), Expect = 1.717e-43 Identity = 91/177 (51.41%), Postives = 113/177 (63.84%), Query Frame = 0
Query: 2 VKTKFTTPDVRAMVRDLRTKVLGLKVVNIYDID-NRTYTFKLAVPGGEKVTLLLESGARFHTTAYARERSVPGELPNVFAMKLRKYLRGKGLEDVRQLGMDRVVVFRFGQGEGALHLILELYASGNLVLTDANYLILALLRTHQYDQGPEKAV-------DGEVVGKDAEAGAARGS 170
+KT+ D+ AMV + V+ ++V NIYD + N+TY KLA PG KV LLL+SG RFHTTAYARE + LP F MKLRK+LRGK L V Q DRV+ F FG G+ HLILELYA+GN++LTD NY IL+LLR+H YD+ + AV + VVG A A GS
Sbjct: 1 MKTRMAIDDISAMVGSITKNVVNMRVTNIYDSEVNKTYILKLATPGLPKVFLLLQSGVRFHTTAYARETA--SALPLQFTMKLRKHLRGKRLASVTQCASDRVIDFAFGDGDQRHHLILELYAAGNIILTDHNYSILSLLRSHTYDEQVKVAVKQIYPMENAMVVGNSAAAVFTSGS 175
BLAST of EWM21560.1 vs. NCBI_GenBank
Match: gi|813157119|ref|XP_012201908.1| (hypothetical protein SPRG_07059 [Saprolegnia parasitica CBS 223.65] >gi|641533481|gb|KDO27470.1| hypothetical protein SPRG_07059 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 162.925 bits (411), Expect = 4.276e-43 Identity = 91/177 (51.41%), Postives = 113/177 (63.84%), Query Frame = 0
Query: 2 VKTKFTTPDVRAMVRDLRTKVLGLKVVNIYDID-NRTYTFKLAVPGGEKVTLLLESGARFHTTAYARERSVPGELPNVFAMKLRKYLRGKGLEDVRQLGMDRVVVFRFGQGEGALHLILELYASGNLVLTDANYLILALLRTHQYDQGPEKAV-------DGEVVGKDAEAGAARGS 170
+KT+ D+ AMV + V+ ++V NIYD + N+TY KLA PG KV LLL+SG RFHTTAYARE + LP F MKLRK+LRGK L V Q DRV+ F FG G+ HLILELYA+GN++LTD NY IL+LLR+H YD+ + AV + VVG A A GS
Sbjct: 1 MKTRMAIDDISAMVGSITKNVVNMRVTNIYDSEVNKTYILKLATPGLPKVFLLLQSGVRFHTTAYARETA--SALPLQFTMKLRKHLRGKRLASVTQCASDRVIDFAFGDGDQRHHLILELYAAGNIILTDHNYSILSLLRSHTYDEQVKVAVKQVYPMENAMVVGNSAAAVFRSGS 175
BLAST of EWM21560.1 vs. NCBI_GenBank
Match: gi|1173927092|gb|OQR81173.1| (hypothetical protein ACHHYP_16685 [Achlya hypogyna]) HSP 1 Score: 162.925 bits (411), Expect = 5.101e-43 Identity = 90/177 (50.85%), Postives = 113/177 (63.84%), Query Frame = 0
Query: 2 VKTKFTTPDVRAMVRDLRTKVLGLKVVNIYDID-NRTYTFKLAVPGGEKVTLLLESGARFHTTAYARERSVPGELPNVFAMKLRKYLRGKGLEDVRQLGMDRVVVFRFGQGEGALHLILELYASGNLVLTDANYLILALLRTHQYDQGPEKAV-------DGEVVGKDAEAGAARGS 170
+KT+ D+ AMV ++ V+ ++V NIYD + ++TY KLA PG KV LLL+SG RFHTTAYARE + LP F MKLRK+LRGK L V Q DRV+ F FG G+ HLILELYA+GN++LTD NY IL+LLR+H YD + AV + VVG A A GS
Sbjct: 1 MKTRMAIDDISAMVGSIQKNVVNMRVTNIYDSEVSKTYILKLATPGLPKVFLLLQSGVRFHTTAYARETA--SALPLQFTMKLRKHLRGKRLAAVTQCASDRVIDFTFGDGDQRHHLILELYAAGNIILTDQNYSILSLLRSHTYDDQVKVAVKQVYPMENAMVVGNSAAAAFTSGS 175
BLAST of EWM21560.1 vs. NCBI_GenBank
Match: gi|698797262|ref|XP_009831660.1| (hypothetical protein H257_07731 [Aphanomyces astaci] >gi|574113451|gb|ETV78941.1| hypothetical protein H257_07731 [Aphanomyces astaci]) HSP 1 Score: 161.77 bits (408), Expect = 1.132e-42 Identity = 85/153 (55.56%), Postives = 105/153 (68.63%), Query Frame = 0
Query: 2 VKTKFTTPDVRAMVRDLRTKVLGLKVVNIYDID-NRTYTFKLAVPGGEKVTLLLESGARFHTTAYARERSVPGELPNVFAMKLRKYLRGKGLEDVRQLGMDRVVVFRFGQGEGALHLILELYASGNLVLTDANYLILALLRTHQYDQGPEKAV 153
+KT+ D+ AMV ++ V+ ++V NIYD + N+TY KLA PG KV LLL+SG RFHTTAYARE + LP F MKLRK+LRGK L V Q G DRV+ F FG G+ HLILELYA+GN++LTD Y IL+LLRTH YD + AV
Sbjct: 1 MKTRMAIDDISAMVGSIQKNVVNMRVTNIYDAEVNKTYILKLATPGLPKVFLLLQSGIRFHTTAYARETA--SALPLQFTMKLRKHLRGKRLASVTQCGSDRVIDFCFGDGDQRHHLILELYAAGNIILTDHAYTILSLLRTHAYDDQVKVAV 151
BLAST of EWM21560.1 vs. NCBI_GenBank
Match: gi|1201317587|gb|OVA16716.1| (Fibronectin-binding A [Macleaya cordata]) HSP 1 Score: 148.673 bits (374), Expect = 1.379e-42 Identity = 74/151 (49.01%), Postives = 106/151 (70.20%), Query Frame = 0
Query: 1 MVKTKFTTPDVRAMVRDLRTKVLGLKVVNIYDIDNRTYTFKLAVPGG-------EKVTLLLESGARFHTTAYARERSVPGELPNVFAMKLRKYLRGKGLEDVRQLGMDRVVVFRFGQGEGALHLILELYASGNLVLTDANYLILALLRTHQ 144
MVK + T DV A V+ LR +++G++ N+YD+ +TY FKL G EKV LL+ESG R HTTAY R++S P+ F +KLRK++R + LEDVRQLG DR+++F+FG G A ++ILELYA GN++LTD+ +L++ LLR+H+
Sbjct: 1 MVKVRMNTADVAAEVKCLR-RLIGMRCSNVYDLSPKTYMFKLMNSSGVTESGESEKVLLLMESGVRLHTTAYVRDKSTT---PSGFTLKLRKHIRTRRLEDVRQLGYDRIILFQFGLGSNAHYIILELYAQGNILLTDSEFLVMTLLRSHR 147
BLAST of EWM21560.1 vs. NCBI_GenBank
Match: gi|545364827|ref|XP_005647447.1| (hypothetical protein COCSUDRAFT_16391 [Coccomyxa subellipsoidea C-169] >gi|384249421|gb|EIE22903.1| hypothetical protein COCSUDRAFT_16391 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 160.999 bits (406), Expect = 2.082e-42 Identity = 81/148 (54.73%), Postives = 105/148 (70.95%), Query Frame = 0
Query: 1 MVKTKFTTPDVRAMVRDLRTKVLGLKVVNIYDIDNRTYTFKLAVPG--GEKVTLLLESGARFHTTAYARERSVPGELPNVFAMKLRKYLRGKGLEDVRQLGMDRVVVFRFGQGEGALHLILELYASGNLVLTDANYLILALLRTHQYD 146
MVK + +T DV V LR VLG++V N+YD + +TY KL+ G GEK L+LESG RFHTT Y ++++ + P+ F +KLRK+LR + L+DVRQLG+DRVV F FG GE HLILELYA GN++L DANY IL LLR+H+ D
Sbjct: 1 MVKQRMSTADVVGEVACLRHSVLGMRVANVYDANAKTYIIKLSKSGEEGEKALLVLESGVRFHTTRYLKDKA---DTPSNFTLKLRKHLRTRRLDDVRQLGVDRVVDFSFGTGEACYHLILELYAQGNVILADANYSILTLLRSHRDD 145
BLAST of EWM21560.1 vs. NCBI_GenBank
Match: gi|970645580|gb|KUF86008.1| (Nuclear export mediator factor NEMF [Phytophthora nicotianae]) HSP 1 Score: 160.614 bits (405), Expect = 3.702e-42 Identity = 84/163 (51.53%), Postives = 106/163 (65.03%), Query Frame = 0
Query: 1 MVKTKFTTPDVRAMVRDLRTKVLGLKVVNIYDIDN-------RTYTFKLAVPGGEKVTLLLESGARFHTTAYARERSVPGELPNVFAMKLRKYLRGKGLEDVRQLGMDRVVVFRFGQGEGALHLILELYASGNLVLTDANYLILALLRTHQYDQGPEKAVDGE 156
M KT+ + D+ AMV +R V+ ++V NIYD+ +TY KL P KV LLLESG RFHT+ YAR+ LP+ F MKLRK+LRGK L + QL DRVV F FGQG HLILELYASGN++LTD +Y IL+LLRTH++D+ + AV E
Sbjct: 1 MKKTRMSIDDIHAMVGSIRANVVNMRVTNIYDVQGQGDGGAAKTYILKLHQPPFPKVFLLLESGVRFHTSKYARDAKAGNALPSQFTMKLRKHLRGKRLSALTQLEGDRVVDFTFGQGALKCHLILELYASGNIILTDGDYRILSLLRTHRFDENVKMAVKQE 163
BLAST of EWM21560.1 vs. NCBI_GenBank
Match: gi|1173943658|gb|OQR92482.1| (hypothetical protein THRCLA_08690 [Thraustotheca clavata]) HSP 1 Score: 160.614 bits (405), Expect = 3.836e-42 Identity = 88/177 (49.72%), Postives = 115/177 (64.97%), Query Frame = 0
Query: 2 VKTKFTTPDVRAMVRDLRTKVLGLKVVNIYDID-NRTYTFKLAVPGGEKVTLLLESGARFHTTAYARERSVPGELPNVFAMKLRKYLRGKGLEDVRQLGMDRVVVFRFGQGEGALHLILELYASGNLVLTDANYLILALLRTHQYDQGPEKAV-------DGEVVGKDAEAGAARGS 170
+KT+ D+ AMV ++ V+ ++V NIYD D ++TY KLA PG KV LLL+SG RFHTTAYARE + LP F MKLRK+LRGK L V Q DRV+ F FG G+ + HLILELYA+GN++LTD Y IL+LLR+H YD+ + AV + VVG A + +G+
Sbjct: 1 MKTRMAIDDISAMVGSIQKNVVNMRVTNIYDSDVSKTYILKLATPGLPKVFLLLQSGIRFHTTAYARETA--SALPLQFTMKLRKHLRGKRLASVTQCASDRVIDFCFGDGDQSHHLILELYAAGNIILTDHTYSILSLLRSHTYDEQVKVAVKQIYPMGNAMVVGNTASSVFTKGT 175 The following BLAST results are available for this feature:
BLAST of EWM21560.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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