EWM21583.1, cds9102 (CDS) Nannochloropsis gaditana

Overview
NameEWM21583.1
Unique Namecds9102
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:405938..406186 -
Alignment locationKK037251.1:405674..405741 -
Alignment locationKK037251.1:405543..405579 -
Alignment locationKK037251.1:405337..405405 -
Alignment locationKK037251.1:404959..405030 -
Alignment locationKK037251.1:404619..404843 -

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Properties
Property NameValue
Protein idEWM21583.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100012g83.1915.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:405938..406186 -
KK037251.1supercontigKK037251.1:405674..405741 -
KK037251.1supercontigKK037251.1:405543..405579 -
KK037251.1supercontigKK037251.1:405337..405405 -
KK037251.1supercontigKK037251.1:404959..405030 -
KK037251.1supercontigKK037251.1:404619..404843 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM21583.1 vs. NCBI_GenBank
Match: gi|585101838|gb|EWM21583.1| (hypothetical protein Naga_100012g83 [Nannochloropsis gaditana])

HSP 1 Score: 496.508 bits (1277), Expect = 8.325e-178
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0 
Query:    1 MRGRFWTPKTKHRVSNKKLVTNNPHVARLSLGCEFTKQKLRITQYPIDSSVQYIFSLRIYTNDSLKNLILRKKTEEEDKTLVEDTISAYRPVAPQNFRSTSEKCLGPTNSLAPVAAFSHRKDLSDESKRYLSEVERRDLEMEHVELTRVGDGVSQLKQVAVDMNERIQVQKAELDPIVGQLAGYREDIGEVNQRLKAAARKGKRWGSFGRNLLCMLLLVGQMIALGYLVDFVIKENRKS 239
            MRGRFWTPKTKHRVSNKKLVTNNPHVARLSLGCEFTKQKLRITQYPIDSSVQYIFSLRIYTNDSLKNLILRKKTEEEDKTLVEDTISAYRPVAPQNFRSTSEKCLGPTNSLAPVAAFSHRKDLSDESKRYLSEVERRDLEMEHVELTRVGDGVSQLKQVAVDMNERIQVQKAELDPIVGQLAGYREDIGEVNQRLKAAARKGKRWGSFGRNLLCMLLLVGQMIALGYLVDFVIKENRKS
Sbjct:    1 MRGRFWTPKTKHRVSNKKLVTNNPHVARLSLGCEFTKQKLRITQYPIDSSVQYIFSLRIYTNDSLKNLILRKKTEEEDKTLVEDTISAYRPVAPQNFRSTSEKCLGPTNSLAPVAAFSHRKDLSDESKRYLSEVERRDLEMEHVELTRVGDGVSQLKQVAVDMNERIQVQKAELDPIVGQLAGYREDIGEVNQRLKAAARKGKRWGSFGRNLLCMLLLVGQMIALGYLVDFVIKENRKS 239
The following BLAST results are available for this feature:
BLAST of EWM21583.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101838|gb|EWM21583.1|8.325e-178100.00hypothetical protein Naga_100012g83 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9132rna9132Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications