EWM21611.1, cds9096 (CDS) Nannochloropsis gaditana

Overview
NameEWM21611.1
Unique Namecds9096
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:392948..393241 +
Alignment locationKK037251.1:393392..393924 +
Alignment locationKK037251.1:394055..394445 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21611.1
ProductBRO1 domain protein
Orig transcript idgnl|cribi|Naga_100012g77.1943.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:392948..393241 +
KK037251.1supercontigKK037251.1:393392..393924 +
KK037251.1supercontigKK037251.1:394055..394445 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR004328BRO1_dom
Homology
BLAST of EWM21611.1 vs. NCBI_GenBank
Match: gi|585101866|gb|EWM21611.1| (BRO1 domain protein [Nannochloropsis gaditana])

HSP 1 Score: 826.624 bits (2134), Expect = 0.000e+0
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0
Query:    1 MASTILPDGLRDSLLTLCTLVYPLPLPRGKKSGAAFAKAFSSVGTPEATTSIMEGIDKVRQEFVDDVSKLKVSPAAVSTAADRYAPQLNRIIQSIDASQDPVRLTQRMQFQWTSALNAQASPSEYKTQEVFIFEMAMVLASKALAQINQAANSIDPSADRYAEAATLLKSAGGVFLALAHDFLPRWKETPDNAAGRHPETSEGVAMALVDLVSAQAQAMYVAKGVFAQTVPPGTLAKLSVTVMDRFEKCISNFKARASAHLARVDPDFLSYLIFMPALYRALAYRFLAIAHWEKEDHGTAIGLLLQAEIILKARRDGVSSGLSGIEESRFLSAFKPQLEILRREVSSMLTSWKRDNSTIYFAGIVDSASLPPLPTGANMVSITKYEYVSNLPPILFAEAAEAKSS 405
            MASTILPDGLRDSLLTLCTLVYPLPLPRGKKSGAAFAKAFSSVGTPEATTSIMEGIDKVRQEFVDDVSKLKVSPAAVSTAADRYAPQLNRIIQSIDASQDPVRLTQRMQFQWTSALNAQASPSEYKTQEVFIFEMAMVLASKALAQINQAANSIDPSADRYAEAATLLKSAGGVFLALAHDFLPRWKETPDNAAGRHPETSEGVAMALVDLVSAQAQAMYVAKGVFAQTVPPGTLAKLSVTVMDRFEKCISNFKARASAHLARVDPDFLSYLIFMPALYRALAYRFLAIAHWEKEDHGTAIGLLLQAEIILKARRDGVSSGLSGIEESRFLSAFKPQLEILRREVSSMLTSWKRDNSTIYFAGIVDSASLPPLPTGANMVSITKYEYVSNLPPILFAEAAEAKSS
Sbjct:    1 MASTILPDGLRDSLLTLCTLVYPLPLPRGKKSGAAFAKAFSSVGTPEATTSIMEGIDKVRQEFVDDVSKLKVSPAAVSTAADRYAPQLNRIIQSIDASQDPVRLTQRMQFQWTSALNAQASPSEYKTQEVFIFEMAMVLASKALAQINQAANSIDPSADRYAEAATLLKSAGGVFLALAHDFLPRWKETPDNAAGRHPETSEGVAMALVDLVSAQAQAMYVAKGVFAQTVPPGTLAKLSVTVMDRFEKCISNFKARASAHLARVDPDFLSYLIFMPALYRALAYRFLAIAHWEKEDHGTAIGLLLQAEIILKARRDGVSSGLSGIEESRFLSAFKPQLEILRREVSSMLTSWKRDNSTIYFAGIVDSASLPPLPTGANMVSITKYEYVSNLPPILFAEAAEAKSS 405          
BLAST of EWM21611.1 vs. NCBI_GenBank
Match: gi|219111527|ref|XP_002177515.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217412050|gb|EEC51978.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 159.073 bits (401), Expect = 1.083e-40
Identity = 105/360 (29.17%), Postives = 182/360 (50.56%), Query Frame = 0
Query:   12 DSLLTLCTLVYPLPLPRGKKSGAAFAKAFSSVGTPEATTSIMEGIDKVRQEFVDDVSKLKVSPAAVSTAADRYAPQLNRIIQSIDASQDPVRLTQRMQFQWTSALNAQASPSEYKTQEVFIFEMAMVLASKALAQINQAA-NSIDPSADRYAEAATLLKSAGGVFLALAHDFLPRW-----KETPDNAAGRHPETSEGVAMALVDLVSAQAQAMYVAKGVFAQTVPP-GTLAKLSVTVMDRFEKCISNFKARASAHLARVDPDFLSYLIFMPALYRALAYRFLAIAHWEKEDHGTAIGLLLQAEIILKARRDGVSSGLSGIEESRFLSAFKPQLEILRREVSSMLTSWKRDNSTIYFAGI 364
            DSL+ L  +V+   +PR      +FAK+ S+VG  +    ++   D VR    D  S  K+S   V   A RY P ++ I+ S     +  RL +++ F+W S +  +  P+ + T E  ++++ M + ++ L +   A  NSI   A  +A A+    +A G+F  LA D LP+W     K + D+      E    +A AL  L  A  Q M VA  +     P  G LAKL + + ++ E  I+  +  A   ++R+DPDF + + F   + R+L+  F A + WEK+DHG A+ +L ++ +  + R    S G+  +  +  L   +  L+ +R  ++++L SW++DNS ++F  +
Sbjct:   21 DSLIRLACVVHRFRVPRIGSRSLSFAKSLSTVGRADKARKLVLNADDVRGRLADACSAKKISSERVVADARRYIPMIHSILLSCKVQPESARLDEKLLFEWKSGI--EHKPAAF-TSEAIMYDLTMCIVTEGLGRAASATENSI---AGDFAAASRDYAAAAGIFDFLAQDHLPKWIAKGSKVSQDDLPS---ECHAPLAKALKTLFMANGQQMAVATVLIKPGKPNYGLLAKLCLGITEQLEDFINMLRKDAFPQMSRMDPDFFTLITFQINIQRSLSLYFQARSLWEKDDHGIAVAILSESTVAARTRESTASDGVPDVTRTPALYPLQDDLKDMRSHMATLLHSWEKDNSQVFFESV 371          
BLAST of EWM21611.1 vs. NCBI_GenBank
Match: gi|1072232200|gb|OEU16932.1| (hypothetical protein FRACYDRAFT_208570 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 149.443 bits (376), Expect = 2.859e-37
Identity = 108/398 (27.14%), Postives = 195/398 (48.99%), Query Frame = 0
Query:   12 DSLLTLCTLVYPLPLPR---GKKSGAAFAKAFSSVGTPEATTSIMEGIDKVRQEFVDDVSKLKVSPAAVSTAADRYAPQLNRIIQSIDASQDPVRLTQRMQFQWTSALNAQASPSEYKTQEVFIFEMAMVLASKALAQINQAANSIDPSADRYAEAATLLKSAGGVFLALAHDFLPRW--KETPDNAAGRHPETSEGVAMALVDLVSAQAQAMYVAKGVFAQTVPPGT-----LAKLSVTVMDRFEKCISNFKARASAHLARVDPDFLSYLIFMPALYRALAYRFLAIAHWEKEDHGTAIGLLLQAEIILKARR-DGVSSGLSGIEESRFLSAFKPQLEILRREVSSMLTSWKRDNSTIYFAGIVDSA-SLPPLPTGANMVSITKYEYVSNLPPILFA 397
            DS + L + V+   +P+   G+K   +FA++F++ G  E T  +M   D  R++ +D V   KVS   V   A RY P +++I+ S     +  RL QR+ F+W S +       +Y   E  + ++ M +  + L +   A  S    A  +A A+    +A G+F  LA D LP+W  + +  N      E     A  L  +  A AQ M +A  +    + PGT     LAKL + V ++ ++ IS+ +  A + ++R++ DF + + F   L ++L Y F A + W++ D+G AI +L ++ + L+        +G+  + +   L A    L  LR  + ++L  W++DNS ++F  +  S  +   L  G  +  + KY + +++ P+L +
Sbjct:   13 DSAIRLASAVHRFRVPKMNGGRK--ISFAESFATTGKHEKTRKLMLKADDQRKKLLDAVLSDKVSHERVVAEAKRYQPYIHQILVSCKFQPEMARLDQRLVFEWKSGVETN---EDYFKSEAIMMDVTMCIICEGLGKAGVATES--SMAGEFAAASREYAAAAGIFQFLAEDHLPKWIARGSKTNEDDLPVECCTSTAKGLSIMFQANAQQMAIATVL----IKPGTPNYSLLAKLCMGVEEQLDEFISHMRKEAFSQMSRIEKDFFTLVNFQITLQKSLCYYFQARSMWDQGDYGLAIAILSESTVYLRTEEISSTKNGMPDVAKIPSLQALTGDLNDLRSHMGNVLREWEKDNSNVFFETVPRSVPTDKKLERGVRLNKVEKYHF-ADVDPVLLS 398          
BLAST of EWM21611.1 vs. NCBI_GenBank
Match: gi|1210530608|dbj|GAX10782.1| (hypothetical protein FisN_13Lh386 [Fistulifera solaris])

HSP 1 Score: 146.362 bits (368), Expect = 4.437e-36
Identity = 111/394 (28.17%), Postives = 181/394 (45.94%), Query Frame = 0
Query:   12 DSLLTLCTLVYPLPLPRGKKSGAAFAKAFSSVGTPEATTSIMEGIDKVRQEFVDDVSKLKVSPAAVSTAADRYAPQLNRIIQSIDASQDPVRLTQRMQFQWTSALNAQASPSEYKTQEVFIFEMAMVLASKALAQINQAA-NSIDPSADRYAEAATLLKSAGGVFLALAHDFLPRW--KETPDNAAGRHPETSEGVAMALVDLVSAQAQAMYVAKGVFAQTVPPGT-----LAKLSVTVMDRFEKCISNFKARASAHLARVDPDFLSYLIFMPALYRALAYRFLAIAHWEKEDHGTAIGLLLQAEIILKARRDGVSSGLSGIEESRFLSAFKPQLEILRREVSSMLTSWKRDNSTIYFAGIVDSA-SLPPLPTGANMVSITKYEYVSNLPPILF 396
            DS + L  +V+   +P+      +F  AF + G    T   M+  D+ R+   +     KVS   V   A RY P +N I+ S     +  RL +++ F+W S + A      + + E  ++++ M +A+  L Q   A  NSI   A  +A ++     A GV+  L+ D LP+W  K +  +A     E    +A AL  L     Q M VA  +    + PGT     LAKL + V  + +  I+  +  A   + R+D DF++ +    A++  L   F A A WE +++G AI  L +A I +K R    S G+  +     L A +P LE  R  +  +L+ W+ DN +++F  +  S  S   L  G  M   T +E +  + P+L 
Sbjct:   18 DSAIRLAAVVHRFRVPQPTTRKVSFFDAFYTTGKDAKTRRHMKQADEARRLLHEACCASKVSAERVMECAQRYEPLINTILLSCQIQPEQARLDEKLVFEWVSGVEASTQAQAFAS-EAILYDLCMTVATTGLGQALLATENSI---AGDFAASSRAYAIAAGVWAFLSDDLLPKWIAKGSSVDATKLPSECHGAMAKALCLLFQTNGQQMAVATLL----MKPGTPNYSLLAKLCLGVQQQLDGFIALLRREAFDSMQRLDKDFMTLVALQIAVHEGLTLYFQARACWENQEYGLAIAFLSEAGIAMKTRSSIASRGVPDVNRVVALKAIQPDLEGFRNHIQFLLSCWEHDNQSVFFEAVPQSVPSGKKLADGHCMNKKTLFE-LQPIEPVLL 402          
BLAST of EWM21611.1 vs. NCBI_GenBank
Match: gi|1210513135|dbj|GAX27532.1| (hypothetical protein FisN_13Hh386 [Fistulifera solaris])

HSP 1 Score: 143.28 bits (360), Expect = 6.565e-35
Identity = 110/394 (27.92%), Postives = 181/394 (45.94%), Query Frame = 0
Query:   12 DSLLTLCTLVYPLPLPRGKKSGAAFAKAFSSVGTPEATTSIMEGIDKVRQEFVDDVSKLKVSPAAVSTAADRYAPQLNRIIQSIDASQDPVRLTQRMQFQWTSALNAQASPSEYKTQEVFIFEMAMVLASKALAQINQAA-NSIDPSADRYAEAATLLKSAGGVFLALAHDFLPRW--KETPDNAAGRHPETSEGVAMALVDLVSAQAQAMYVAKGVFAQTVPPGT-----LAKLSVTVMDRFEKCISNFKARASAHLARVDPDFLSYLIFMPALYRALAYRFLAIAHWEKEDHGTAIGLLLQAEIILKARRDGVSSGLSGIEESRFLSAFKPQLEILRREVSSMLTSWKRDNSTIYFAGIVDSA-SLPPLPTGANMVSITKYEYVSNLPPILF 396
            DS + L  +V+   +P+      +F  AF + G    T   M+  D+ R+   +     KVS   V   A RY P +N I+ S     +  RL +++ F+W S +        + + E  ++++ M +A+  L Q   A  +SI   A  +A ++    +A G++  L+ D LP+W  K +  +A     E    +A AL  L     Q M VA  +    + PGT     LAKL + V  + +  I+  +  A   + R+D DFL+ +    A++  L   F A A WE +++G AI  L +A I +K R    S G+  I     L A +P LE  R  +  +L+ W+ DN +++F  +  S  S   L  G  M   T +E +  + P+L 
Sbjct:   18 DSAIRLAAVVHRFRVPQPTPRKISFFDAFYTTGKDAKTRRHMKQADEARRLLQEACCASKVSAERVIECAQRYEPLINTILLSCQIQPEQARLDEKLVFEWVSGVEGSTHAQAFAS-EAILYDLCMTVATTGLGQALLATEHSI---AGDFAASSRAYATAAGIWAFLSDDLLPKWIAKGSSVDATKLPSECHGAMAKALCLLFQTNGQQMAVATLL----MKPGTPNYSLLAKLCLGVQQQLDGFIALLRREAFDPMQRLDKDFLTLVALQIAVHEGLTLYFQARACWENQEYGLAIAFLSEAGIAMKTRTSIASRGVPDITRVVALKAIQPDLEDFRNHIQFLLSCWEHDNQSVFFEAVPQSVPSGKKLADGHCMNKKTVFE-LQPIEPVLL 402          
BLAST of EWM21611.1 vs. NCBI_GenBank
Match: gi|397613585|gb|EJK62307.1| (hypothetical protein THAOC_17084 [Thalassiosira oceanica])

HSP 1 Score: 129.028 bits (323), Expect = 1.285e-29
Identity = 101/388 (26.03%), Postives = 173/388 (44.59%), Query Frame = 0
Query:   12 DSLLTLCTLVYPLPLPR-GKKSGAAFAKAFSSVGTPEATTS-IMEGIDKVRQEFVDDVSKLKVSPAAVSTAADRYAPQLNRIIQSIDASQDPVRLTQRMQFQWTSALN-AQASPSEYKTQEVFIFEMAMVLASKALAQINQAANSIDPSADRYAEAATLLKSAGGVFLALAHDFLPRWKETPDNAAGRHP----ETSEGVAMALVDLVSAQAQAMYVAKGVFAQTVPPGT-----LAKLSVTVMDRFEKCISNFKARASAHLARVDPDFLSYLIFMPALYRALAYRFLAIAHWEKEDHGTAIGL-LLQAEIILKARRDGVSSGLSGIEESRFLSAFKPQLEILRREVSSMLTSWKRDNSTIYFAGIVDSASLPPLPTGANMVSITKYE 386
            DS++ LC+ V+   +P        +F ++F SV    ATT+ +++  D  R +    ++  K+  + +S A   Y P +N+I+ S     +  RL +R+ F W S +   +     Y   E  +FE+ M +A+ AL++ N   N+       +A A      + GVF  L  + LP W       A        ET  GV +A   L+   AQ M VA  +    V PGT     L KL   + +  E  +S  +  +  H+ R+DP+FL+ + F   + +AL+  F              +GL + +A + ++ R    S GL  IE +  L +   ++   R  ++ +L +W++DN  +YF  +  S    P   G   + + K E
Sbjct:   14 DSVIRLCSAVHRFSIPYINPNDQLSFEESFKSVSCDHATTTKVLQQADNRRHDVKKLMADGKLCHSELSKALIDYLPLINQILLSCKFQPEAARLDKRLLFSWHSGIEVGKNKKKHYFDSEALMFELVMSIATLALSESNVGCNAC--IEGDFASACREFAKSAGVFQYLGEELLPSWMANSQQHAEMDKQSLAETRVGVGVAFSALLQGVAQQMAVATVL----VKPGTPNYALLGKLCCGIAEDLESFVSTIRKTSPIHMGRLDPNFLTLVTFSTNVQQALSLYFFG--------QKFMVGLRVRKATVAMRTRSTPTSRGLPEIEPNGPLQSLVAEINGFRLHMNRLLKAWEKDNQLVYFDKVPPSV---PSNKGLKAIRLKKCE 384          
BLAST of EWM21611.1 vs. NCBI_GenBank
Match: gi|298709734|emb|CBJ31538.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 119.398 bits (298), Expect = 2.053e-26
Identity = 97/373 (26.01%), Postives = 166/373 (44.50%), Query Frame = 0
Query:   10 LRDSLLTLCTLVYPLPLPRGKKSGAAFAKAFSSVGTPEATTSIMEGIDKVRQEFVDDVSKLKVSPAAVSTAADRYAPQLNRIIQSIDASQDPVRLTQRMQFQWTSALNAQASPSEYKTQEVFIFEMAMVLASKALAQINQAANSI-DPSADRYAEAATLLKSAGGVFLALAHDFLPRWKETPDNAAGRHPETSEGVAMALVDLVSAQAQAMYVAKGVFAQTVPPGTLAKLSVTVMDRFEKCISNF-KARASAHLARVDPDFLSYLIFMPALYRALAYRFLAIAHWEKEDHGTAIGLLLQAEIILKARRDGVSSGLSGIEESRFLSAFKPQLEILRREVSSMLTSWKRDNSTIYFAGIVDSASLPPLPTGANMV 380
            L  +LL + T VY  PLP  K    AF K F+     E T+  +  +++ R +   +++    + A     A RY P +  +++S++ + D V L + + F W + L  +    ++ T +  +++  MVLA++AL+  +   N + D    ++ EA   L+ A G+F  L    LPRW      A  R  E   G+   LV    A+AQ M + K + A   P   LA+L   V  + E+ +S   K  +S+   ++D  FL ++ F                      H +A          ++ RRD VS GL  +  +  L      L+ L+ E   +  ++ +DN++IY+  + D   L PLP    M+
Sbjct:    9 LSPALLKVATHVYRFPLPATKV--IAFTKCFADNLGAEETSKAISSMEQARDDLAHELASGTPNYAQAVAGALRYCPLIAHVLRSLEKANDVVYLNEPLSFTWATGLGERPR-QDWITNQAVVWDKCMVLAAQALSYADTVYNMLEDSQGSKFTEAGEHLRKAAGIFERLHKAELPRWVGDTSEAP-RLVEAEPGICEGLVHFCLAEAQQMAIGKALVAGKTPKTLLARLCEGVRGQLEEAVSAMRKGGSSSAYHKLDSPFLVHISFQ---------------------HASACK-------YVEERRDAVSVGLPPL--AGPLRNISHDLKTLQGEFRQLRDAYAKDNNSIYYEPVPDLDMLDPLPQPVVMM 347          
BLAST of EWM21611.1 vs. NCBI_GenBank
Match: gi|330806545|ref|XP_003291228.1| (hypothetical protein DICPUDRAFT_81911 [Dictyostelium purpureum] >gi|325078587|gb|EGC32230.1| hypothetical protein DICPUDRAFT_81911 [Dictyostelium purpureum])

HSP 1 Score: 86.2705 bits (212), Expect = 5.519e-15
Identity = 90/372 (24.19%), Postives = 165/372 (44.35%), Query Frame = 0
Query:   20 LVYPLPLPRGKKSGAAFAKAFSSVGTPEATTSIMEGIDKVRQEFVDDVSKLKVSPAAVSTAADRYAPQLNRIIQSIDASQDPVRLTQRMQFQWTSALNAQASPSEYKTQEVFIFEMAMVLASKALAQINQAANSIDPSAD-RYAEAATL----LKSAGGVFLALAHDFLPRWKETPDNAAGRHPETSEGVAMALVDLVSAQAQAMYVAKGVFAQTVPPGTLAKLSVTVMDRFEKCISNFKARASAHLARVDPDFLSYLIFMPALYRALAYRFLAIAHWEKEDHGTAIGLLLQAEIILKARRDGVSSGLSGIEESRFLSAFKPQLEILRREVSSMLTSWKRDNSTIYFAGIVDSASL-PPLPTGANMVSITKY 385
            L+    +P+ K+    F K   +  TPE+ + +       R E +  + K   SP+++  A ++Y P L  ++ +++   + +RL +++ F W+S     AS S Y    +  FE+ M L +   A  N+AA   D S +  + E A L    LK A G++  +    +PRW+  P++   R  E      +A+ +L  + A A+ V K +  Q   PG ++KLS     R E   S  K   S    ++     +Y   +  L  +    F+A+    +++ G A+G    A  +LK ++           E+R  +     L  L  E+ +   ++ ++N  IYF    D  SL  P P   +++++  +
Sbjct:   11 LMIKFEIPQSKR--IQFEKIIRT-QTPESASKLATA-SLTRNEMIIIIEK--SSPSSIIMACEKYIPDLYGLVSTVE-DNNTLRLNEQLSFNWSSI----ASKSFYSGFSLR-FELIMNLVTYGFAHYNRAAEINDSSNEANFDENAKLIINHLKIAAGIYNFITSFEMPRWQHPPED---RPVECHNNFILAMYELCLSTALAVTVRKAL-KQGTSPGVISKLSCEAWHRAEMSKSFLKDLGSQFYKKLPKSLRTYYSTLIKLQHSTTMMFMALNSKSQQNFGDALGYFSIALPLLKVKKPS---------ETRIANI----LNGLITEIQNESNTFSKENEVIYFQKKSDPNSLEKPSPMAKSIINMITF 353          
BLAST of EWM21611.1 vs. NCBI_GenBank
Match: gi|470493732|ref|XP_004346546.1| (BRO1like domain containing protein [Acanthamoeba castellanii str. Neff] >gi|440800565|gb|ELR21601.1| BRO1like domain containing protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 76.6406 bits (187), Expect = 1.092e-11
Identity = 89/301 (29.57%), Postives = 137/301 (45.51%), Query Frame = 0
Query:   20 LVYPLPLPRGKKSGA-AFAKAFSSVGTPEATTSIMEGIDKVRQEFVDDVSKL---KVSPAAVSTAADRYAPQLNRIIQSIDASQDPVRLTQRMQFQWTSALNAQASPSEYKTQEV--------FIFEMAMVLASKALAQINQA-------ANSIDPSADRYAEAATLLKSAGGVFLALAHDFLPRWKETPDNAAGRHPETSEGVAMALVDLVSAQAQAMYVAKGVFAQTVPPGTLAKLSVTVMDRFEKCISNFKARASAHLARVDPDFLSYLIFMPALYRALAYRFLAIAHWEKEDHGTAI 301
            +V+P  LP   K+GA A  +A  +  T  A+   +     +R+E V  ++     +VS A V   A+RY P L  +  ++  +Q  + L + + F+WTS+L      +++KT           F FE+ M L +  L    +A       A    P  D    AA LL+ A GVF  LA   +PRW    D       E +  +A AL  +  A AQ + + K + A  +  G +AKLS  V    E  +S  K   +  L  V+  FL YL     + +A+  R LA +H+E+E  G A+
Sbjct:   19 IVFPFRLP---KAGAVAIQRALHT--TDGASRGHVSRTSALREELVAALTPAGGGQVSTALVLQKAERYLPSLCGLACAL-TNQPRLHLNEPLNFKWTSSLR----KTKHKTTGSRKMYLDWDFKFELVMTLNTLGLGYARRASEVLYSGAGGGQPDEDL-KLAALLLRKAAGVFTHLADTEIPRWVGVADRETA--VECNHNIAKALSIVCLALAQQLTIKKAL-ADGMKKGIVAKLSAEVCHMLENALSLAKMYPNQRL--VNKHFLKYLELQITMNKAVCGRLLAASHYEQEKLGHAV 303          
BLAST of EWM21611.1 vs. NCBI_GenBank
Match: gi|1069937658|ref|XP_018298687.1| (pH-response regulatory protein PalC [Phycomyces blakesleeanus NRRL 1555(-)] >gi|1026596297|gb|OAD80647.1| pH-response regulatory protein PalC [Phycomyces blakesleeanus NRRL 1555(-)])

HSP 1 Score: 75.485 bits (184), Expect = 2.981e-11
Identity = 88/401 (21.95%), Postives = 170/401 (42.39%), Query Frame = 0
Query:   20 LVYPLPLPRGKKSGA-AFAKAFSSVGTPEATTS-----------IMEGIDKVRQEFVDDVSKLKVSPAAVSTAADRYAPQLNRIIQSIDASQDPVRLTQRMQFQWTSALNAQASPSEYKTQEVFI----FEMAMVLASKALAQINQAANSIDPSADRYAEAATL-------LKSAGGVFLALAHDFLPRWKETPDNAAGRHPETSEGVAMALVDLVSAQAQAMYVAKGVFAQTVPPGTLAKLSVTVMDRFEKC---ISNFKARASAHLARVDPDFLSYLIFMPALYRALAYRFLAIAHWEKEDHGTAIGLL---------LQAEIILKARRDGVSSGLSGIEESRFLSAFKPQLEILRREVSSMLTSWKRDNSTIYFAGIVDSASLPPLPTGANMVSITKY 385
            + YP  LP    +GA +F   F  VG+  +  S           +++G+ K   E +D      ++        D Y P L  II  +++ +  +     ++  W S L+     +      +      +E+  VL + A A   Q  +++    ++ ++AA +       L +A G+F  LA++ LP+W++ PDN   R  ET + + +AL  +  A AQ++ ++K +    +     AKL + V +++E     IS+ K         V  +   YL      Y+A+A ++LA+   ++++ G A+G +         +Q   + K RR  VS  L    E   ++    +L ++   V      ++   S  Y       A    +P+G  ++ I ++
Sbjct:    1 MSYPYSLP---TTGAVSFVDYFEDVGSYSSQISDATAQRGRLRTVLKGLKK---EALDTRDYRNIT-------IDDYLPYLISIINCLESGELKLHKNNNIETSWRSTLSDHIIHTGSNAPRIVCPDIYYELIFVLLTYAYACSLQGNDTLKAVQEQGSDAAAIYNKVADALNTAAGIFQYLANEILPKWRQPPDN---RPVETIKELLVALSKMALADAQSIAISKALVNTGLSKALAAKLYMGVAEQYEMAYGLISSIKG-----TQEVSSELRRYLADGSQFYKAMAKKYLALDANDRQNLGEAVGFVRDCKADLRAIQHSGLSKTRRSAVS--LRACNEEEAVTELLQKLTMINDTVCH--KKYRSIESVTYQTVPTRQALQQKIPSGRGVLEIKRF 376          
The following BLAST results are available for this feature:
BLAST of EWM21611.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101866|gb|EWM21611.1|0.000e+0100.00BRO1 domain protein [Nannochloropsis gaditana][more]
gi|219111527|ref|XP_002177515.1|1.083e-4029.17predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1072232200|gb|OEU16932.1|2.859e-3727.14hypothetical protein FRACYDRAFT_208570 [Fragilario... [more]
gi|1210530608|dbj|GAX10782.1|4.437e-3628.17hypothetical protein FisN_13Lh386 [Fistulifera sol... [more]
gi|1210513135|dbj|GAX27532.1|6.565e-3527.92hypothetical protein FisN_13Hh386 [Fistulifera sol... [more]
gi|397613585|gb|EJK62307.1|1.285e-2926.03hypothetical protein THAOC_17084 [Thalassiosira oc... [more]
gi|298709734|emb|CBJ31538.1|2.053e-2626.01conserved unknown protein [Ectocarpus siliculosus][more]
gi|330806545|ref|XP_003291228.1|5.519e-1524.19hypothetical protein DICPUDRAFT_81911 [Dictyosteli... [more]
gi|470493732|ref|XP_004346546.1|1.092e-1129.57BRO1like domain containing protein [Acanthamoeba c... [more]
gi|1069937658|ref|XP_018298687.1|2.981e-1121.95pH-response regulatory protein PalC [Phycomyces bl... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9126rna9126Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications