EWM21570.1, cds9094 (CDS) Nannochloropsis gaditana

Overview
NameEWM21570.1
Unique Namecds9094
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:389884..391308 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21570.1
Productcytochrome b5
Orig transcript idgnl|cribi|Naga_100012g75.1902.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:389884..391308 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
GO:0020037heme binding
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR018506Cyt_B5_heme-BS
IPR001199Cyt_B5-like_heme/steroid-bd
Homology
BLAST of EWM21570.1 vs. NCBI_GenBank
Match: gi|585101825|gb|EWM21570.1| (cytochrome b5 [Nannochloropsis gaditana])

HSP 1 Score: 969.533 bits (2505), Expect = 0.000e+0
Identity = 474/474 (100.00%), Postives = 474/474 (100.00%), Query Frame = 0
Query:    1 MRVISQKRFNSAYDTSCTSMHLGKQEPEESEPSSHYFGPGRANSCAPCGVGTLSDVNGLRIEKNIEEQGSGNIAARCDCGQHTFLVLASDSGGDTAPTTPDSSGAIRTSHSETSITESLGGNVVEGKLTDGRRRHWENQSGADLSSSLPTHSRLIKEDDPADIEILSATMVQAMVCKGSTEGRVNGNRRQSHRHSLDSSEGPVKALSPRPSVCPASARPQDHYRSHQPQQQHQRRRLSVSGADGGDLGTSIGSSTVLDGSMEDPSALSLDRIVVEGNGDMVVIQPSVVCDACPSCDDVCTLQDCRGCQKKRERLLASGIMVVQEAWGRTTRKRPLQENSLSGGACVPIMAKPHGSAKGDGCQNVSYSLCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGGQDCTEDFEFHSAKAQKLWKNLKIGSVRPCPGDRQSRRSRGGDDRSSRSGSDLGSLVGSSCSIM 474
            MRVISQKRFNSAYDTSCTSMHLGKQEPEESEPSSHYFGPGRANSCAPCGVGTLSDVNGLRIEKNIEEQGSGNIAARCDCGQHTFLVLASDSGGDTAPTTPDSSGAIRTSHSETSITESLGGNVVEGKLTDGRRRHWENQSGADLSSSLPTHSRLIKEDDPADIEILSATMVQAMVCKGSTEGRVNGNRRQSHRHSLDSSEGPVKALSPRPSVCPASARPQDHYRSHQPQQQHQRRRLSVSGADGGDLGTSIGSSTVLDGSMEDPSALSLDRIVVEGNGDMVVIQPSVVCDACPSCDDVCTLQDCRGCQKKRERLLASGIMVVQEAWGRTTRKRPLQENSLSGGACVPIMAKPHGSAKGDGCQNVSYSLCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGGQDCTEDFEFHSAKAQKLWKNLKIGSVRPCPGDRQSRRSRGGDDRSSRSGSDLGSLVGSSCSIM
Sbjct:    1 MRVISQKRFNSAYDTSCTSMHLGKQEPEESEPSSHYFGPGRANSCAPCGVGTLSDVNGLRIEKNIEEQGSGNIAARCDCGQHTFLVLASDSGGDTAPTTPDSSGAIRTSHSETSITESLGGNVVEGKLTDGRRRHWENQSGADLSSSLPTHSRLIKEDDPADIEILSATMVQAMVCKGSTEGRVNGNRRQSHRHSLDSSEGPVKALSPRPSVCPASARPQDHYRSHQPQQQHQRRRLSVSGADGGDLGTSIGSSTVLDGSMEDPSALSLDRIVVEGNGDMVVIQPSVVCDACPSCDDVCTLQDCRGCQKKRERLLASGIMVVQEAWGRTTRKRPLQENSLSGGACVPIMAKPHGSAKGDGCQNVSYSLCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGGQDCTEDFEFHSAKAQKLWKNLKIGSVRPCPGDRQSRRSRGGDDRSSRSGSDLGSLVGSSCSIM 474          
BLAST of EWM21570.1 vs. NCBI_GenBank
Match: gi|298705317|emb|CBJ49007.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 116.701 bits (291), Expect = 6.244e-25
Identity = 67/201 (33.33%), Postives = 103/201 (51.24%), Query Frame = 0
Query:  252 GSSTVLDGSMEDPSALSLDRIVVEGN-GDMVVIQPSVVCDACPSCDDVCTLQDCRGCQKKRE-------RLLASGIMVVQEAWGRTTRKRPLQENSLSGGA----CVPIMAKPHGSAKGDGCQNVSYSLCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGGQDCTEDFEFHSAKAQKLWKNLKIGSVRPC 440
            GS+     S+ED    +  RI V+ + G    ++ S VCDACP C+D C +  C GC + R        +L+ S   V              +  + +GG       P++++ +        +  SY+LCE+RR +   +CW+V++G VYDVT  L  HP G  ++ + AGG+DC EDF FHS  A+K W+  +IGS+  C
Sbjct:  207 GSAAAAVASLED----AAQRIAVDPDSGHSYFVERSTVCDACPYCEDTCEVAWCNGCDETRMHLEEAYGKLMLSAAEVAGAGGRHGGGGGGCETGADNGGGSRLKLAPVLSRRYP-------RKSSYTLCEVRRRKVTGACWVVSQGSVYDVTAALPDHPGGKRSVLKNAGGRDCAEDFFFHSRAAKKQWRQYRIGSLVAC 396          
BLAST of EWM21570.1 vs. NCBI_GenBank
Match: gi|698795590|ref|XP_009830824.1| (hypothetical protein H257_07099 [Aphanomyces astaci] >gi|574114400|gb|ETV79888.1| hypothetical protein H257_07099 [Aphanomyces astaci])

HSP 1 Score: 107.071 bits (266), Expect = 2.369e-23
Identity = 54/111 (48.65%), Postives = 61/111 (54.95%), Query Frame = 0
Query:  364 VSYSLCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGGQDCTEDFEFHSAKAQKLWKNLKIGSVRPCPGDRQSRRSRGGDDRSSRSGSDLGSLVGSSCSIM 474
            V   LCE++RHR+L SCWLVA G VYDVTN +  HPAG   + RKAGG DCT+D  FHS  AQ+ WK   IG   PC           GDD         G     SCSIM
Sbjct:   99 VKLCLCEVKRHRSLTSCWLVANGIVYDVTNVIQQHPAGTKCILRKAGGVDCTQDLRFHSKDAQRCWKQCAIGKFLPC-----------GDDNG-------GDAAQGSCSIM 191          
BLAST of EWM21570.1 vs. NCBI_GenBank
Match: gi|673042559|ref|XP_008875240.1| (hypothetical protein H310_10590 [Aphanomyces invadans] >gi|574468913|gb|ETV95929.1| hypothetical protein H310_10590 [Aphanomyces invadans])

HSP 1 Score: 106.686 bits (265), Expect = 3.077e-23
Identity = 51/107 (47.66%), Postives = 63/107 (58.88%), Query Frame = 0
Query:  368 LCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGGQDCTEDFEFHSAKAQKLWKNLKIGSVRPCPGDRQSRRSRGGDDRSSRSGSDLGSLVGSSCSIM 474
            LCE++RHR+L+SCWLVA G VYDVTN +  HPAG   + RKAGG DCT+D  FHS +AQ+ WK   +G + PC                   G D GS    SC+IM
Sbjct:   99 LCEVKRHRSLSSCWLVANGIVYDVTNVIQQHPAGTKCILRKAGGVDCTQDLRFHSKEAQQCWKQCAVGKLLPC-------------------GDDDGSTSQDSCTIM 186          
BLAST of EWM21570.1 vs. NCBI_GenBank
Match: gi|564278286|gb|ETB59705.1| (hypothetical protein YYC_03121 [Plasmodium yoelii 17X])

HSP 1 Score: 102.834 bits (255), Expect = 1.515e-21
Identity = 53/157 (33.76%), Postives = 80/157 (50.96%), Query Frame = 0
Query:  289 CDACPSCDDVCTLQDCRGCQKKRERLLAS----GIMVVQEAWGRTTRKRPLQENSLSGGACVPIMAKPHGSAKGDGCQNVSYSLCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGGQDCTEDFEFHSAKAQ-KLWKNLKIGSVRPC 440
            C+AC  C+DVC  + C+ C+ KR+ L        + + Q    R+     L   +        ++   +   K       +++ CEI+RH  +  CW+VA G VYDVT ++ +HP G   +  KA   D + DF FHS  AQ K+W++LKIG V PC
Sbjct:   60 CNACEFCEDVCLFEFCKKCEMKRKELYIKYKKYDLKIYQNKLNRSIILNALTHKN--------VLTNEYTKMKEIRDYKKNFTFCEIKRHCNIDDCWVVANGNVYDVTKFIENHPGGINCILNKATN-DVSVDFSFHSKYAQTKIWESLKIGRVIPC 207          
BLAST of EWM21570.1 vs. NCBI_GenBank
Match: gi|1173960578|gb|OQS06692.1| (hypothetical protein THRCLA_01269 [Thraustotheca clavata])

HSP 1 Score: 101.293 bits (251), Expect = 2.096e-21
Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = 0
Query:  368 LCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGGQDCTEDFEFHSAKAQKLWKNLKIGSVRPCPGD 443
            LCE++RHR+  SCWLVA G VYDVT+ ++ HPAG   + RKAGG+DCT+D +FHS  A+  W   +IG ++PC  D
Sbjct:  103 LCEVKRHRSATSCWLVANGIVYDVTDIMNQHPAGTKCILRKAGGEDCTKDMKFHSKAARNCWSKCQIGKLQPCGED 178          
BLAST of EWM21570.1 vs. NCBI_GenBank
Match: gi|669145480|ref|XP_008608302.1| (hypothetical protein SDRG_04405 [Saprolegnia diclina VS20] >gi|530739733|gb|EQC37975.1| hypothetical protein SDRG_04405 [Saprolegnia diclina VS20])

HSP 1 Score: 99.7525 bits (247), Expect = 1.164e-20
Identity = 54/135 (40.00%), Postives = 76/135 (56.30%), Query Frame = 0
Query:  320 MVVQEAWGRTTRKR--PLQ-----ENSLSGGACVPIMAKPHGSAKGDGC----QNVSYS---LCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGGQDCTEDFEFHSAKAQKLWKNLKIGSVRPC 440
            M+  E   R  RKR   L+     + + +  + V ++  P  S K   C    +  SY    LCE+++HR+ ASCWLVA G VYDVT+ ++ HPAG   + RK+GG DC +D +FHS  AQ  W   KIG ++PC
Sbjct:   52 MIANEQTLRKERKRCKSLELVYSDDEASTATSTVSLVTTPPSSTKKGNCVVQTRCTSYEKLCLCEVKQHRSAASCWLVANGIVYDVTDVMAQHPAGIKCILRKSGGVDCAQDMKFHSKAAQSCWSKCKIGMLQPC 186          
BLAST of EWM21570.1 vs. NCBI_GenBank
Match: gi|1173942291|gb|OQR91315.1| (hypothetical protein ACHHYP_04793 [Achlya hypogyna])

HSP 1 Score: 99.3673 bits (246), Expect = 1.387e-20
Identity = 41/76 (53.95%), Postives = 53/76 (69.74%), Query Frame = 0
Query:  368 LCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGGQDCTEDFEFHSAKAQKLWKNLKIGSVRPCPGD 443
            LCE++RHR+ +SCWLVA G VYDVT+ ++ HPAG   + RK+GG DC +D +FHS  AQ  W   KIG + PC  D
Sbjct:  111 LCEVKRHRSASSCWLVANGIVYDVTDVMAQHPAGTKCILRKSGGMDCAQDMKFHSKAAQSCWSKCKIGMLLPCGDD 186          
BLAST of EWM21570.1 vs. NCBI_GenBank
Match: gi|397587408|gb|EJK53908.1| (hypothetical protein THAOC_26563 [Thalassiosira oceanica])

HSP 1 Score: 96.2857 bits (238), Expect = 7.727e-20
Identity = 42/80 (52.50%), Postives = 51/80 (63.75%), Query Frame = 0
Query:  366 YSLCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGG-QDCTEDFEFHSAKAQKLWKNLKIGSVRPCPGDR 444
            ++ CE+R+H    SCWL     VYD T+YL SHP G  A+ RK+GG  DCTEDF FH  K QK W+  KIG + PCP  R
Sbjct:   89 FTACEVRKHNRPESCWLTVGNNVYDATDYLHSHPGGVQAILRKSGGVSDCTEDFNFHRRKGQKEWQRFKIGKLIPCPCQR 168          
BLAST of EWM21570.1 vs. NCBI_GenBank
Match: gi|219117871|ref|XP_002179722.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408775|gb|EEC48708.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 96.6709 bits (239), Expect = 8.419e-20
Identity = 57/163 (34.97%), Postives = 75/163 (46.01%), Query Frame = 0
Query:  283 IQPSVVCDACPSCDDVCTLQDCRGCQKKRERLLASGIMVVQEAWGRTTRKRPLQENSLSGGACVPIMAKPHGSAKGDGCQNVSYSLCEIRRHRTLASCWLVAKGQVYDVTNYLS--SHPAGAIAMARKAGG-QDCTEDFEFHSAKAQKLWKNLKIGSVRPCPG 442
            +     CDACP C DVC   +C  C +K                   TR  P          C P   +  G           Y++C++RRH    S WLVA   +YD T+Y+   SHP GA ++ RKAGG QDC +D +FHS    + WK  +IG +RPC G
Sbjct:   37 VDYKTTCDACPCCRDVCDNPECLSCDEK-------------------TRYLP----------CPPCQGREQGY----------YTMCQVRRHNNKDSAWLVAGDTIYDATSYMQQDSHPGGAASILRKAGGVQDCLQDLQFHSKAGVRTWKKYEIGKLRPCEG 160          
The following BLAST results are available for this feature:
BLAST of EWM21570.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101825|gb|EWM21570.1|0.000e+0100.00cytochrome b5 [Nannochloropsis gaditana][more]
gi|298705317|emb|CBJ49007.1|6.244e-2533.33conserved unknown protein [Ectocarpus siliculosus][more]
gi|698795590|ref|XP_009830824.1|2.369e-2348.65hypothetical protein H257_07099 [Aphanomyces astac... [more]
gi|673042559|ref|XP_008875240.1|3.077e-2347.66hypothetical protein H310_10590 [Aphanomyces invad... [more]
gi|564278286|gb|ETB59705.1|1.515e-2133.76hypothetical protein YYC_03121 [Plasmodium yoelii ... [more]
gi|1173960578|gb|OQS06692.1|2.096e-2153.95hypothetical protein THRCLA_01269 [Thraustotheca c... [more]
gi|669145480|ref|XP_008608302.1|1.164e-2040.00hypothetical protein SDRG_04405 [Saprolegnia dicli... [more]
gi|1173942291|gb|OQR91315.1|1.387e-2053.95hypothetical protein ACHHYP_04793 [Achlya hypogyna... [more]
gi|397587408|gb|EJK53908.1|7.727e-2052.50hypothetical protein THAOC_26563 [Thalassiosira oc... [more]
gi|219117871|ref|XP_002179722.1|8.419e-2034.97predicted protein [Phaeodactylum tricornutum CCAP ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9124rna9124Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications