EWM21570.1, cds9094 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21570.1 vs. NCBI_GenBank
Match: gi|585101825|gb|EWM21570.1| (cytochrome b5 [Nannochloropsis gaditana]) HSP 1 Score: 969.533 bits (2505), Expect = 0.000e+0 Identity = 474/474 (100.00%), Postives = 474/474 (100.00%), Query Frame = 0 Query: 1 MRVISQKRFNSAYDTSCTSMHLGKQEPEESEPSSHYFGPGRANSCAPCGVGTLSDVNGLRIEKNIEEQGSGNIAARCDCGQHTFLVLASDSGGDTAPTTPDSSGAIRTSHSETSITESLGGNVVEGKLTDGRRRHWENQSGADLSSSLPTHSRLIKEDDPADIEILSATMVQAMVCKGSTEGRVNGNRRQSHRHSLDSSEGPVKALSPRPSVCPASARPQDHYRSHQPQQQHQRRRLSVSGADGGDLGTSIGSSTVLDGSMEDPSALSLDRIVVEGNGDMVVIQPSVVCDACPSCDDVCTLQDCRGCQKKRERLLASGIMVVQEAWGRTTRKRPLQENSLSGGACVPIMAKPHGSAKGDGCQNVSYSLCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGGQDCTEDFEFHSAKAQKLWKNLKIGSVRPCPGDRQSRRSRGGDDRSSRSGSDLGSLVGSSCSIM 474 MRVISQKRFNSAYDTSCTSMHLGKQEPEESEPSSHYFGPGRANSCAPCGVGTLSDVNGLRIEKNIEEQGSGNIAARCDCGQHTFLVLASDSGGDTAPTTPDSSGAIRTSHSETSITESLGGNVVEGKLTDGRRRHWENQSGADLSSSLPTHSRLIKEDDPADIEILSATMVQAMVCKGSTEGRVNGNRRQSHRHSLDSSEGPVKALSPRPSVCPASARPQDHYRSHQPQQQHQRRRLSVSGADGGDLGTSIGSSTVLDGSMEDPSALSLDRIVVEGNGDMVVIQPSVVCDACPSCDDVCTLQDCRGCQKKRERLLASGIMVVQEAWGRTTRKRPLQENSLSGGACVPIMAKPHGSAKGDGCQNVSYSLCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGGQDCTEDFEFHSAKAQKLWKNLKIGSVRPCPGDRQSRRSRGGDDRSSRSGSDLGSLVGSSCSIM Sbjct: 1 MRVISQKRFNSAYDTSCTSMHLGKQEPEESEPSSHYFGPGRANSCAPCGVGTLSDVNGLRIEKNIEEQGSGNIAARCDCGQHTFLVLASDSGGDTAPTTPDSSGAIRTSHSETSITESLGGNVVEGKLTDGRRRHWENQSGADLSSSLPTHSRLIKEDDPADIEILSATMVQAMVCKGSTEGRVNGNRRQSHRHSLDSSEGPVKALSPRPSVCPASARPQDHYRSHQPQQQHQRRRLSVSGADGGDLGTSIGSSTVLDGSMEDPSALSLDRIVVEGNGDMVVIQPSVVCDACPSCDDVCTLQDCRGCQKKRERLLASGIMVVQEAWGRTTRKRPLQENSLSGGACVPIMAKPHGSAKGDGCQNVSYSLCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGGQDCTEDFEFHSAKAQKLWKNLKIGSVRPCPGDRQSRRSRGGDDRSSRSGSDLGSLVGSSCSIM 474
BLAST of EWM21570.1 vs. NCBI_GenBank
Match: gi|298705317|emb|CBJ49007.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 116.701 bits (291), Expect = 6.244e-25 Identity = 67/201 (33.33%), Postives = 103/201 (51.24%), Query Frame = 0 Query: 252 GSSTVLDGSMEDPSALSLDRIVVEGN-GDMVVIQPSVVCDACPSCDDVCTLQDCRGCQKKRE-------RLLASGIMVVQEAWGRTTRKRPLQENSLSGGA----CVPIMAKPHGSAKGDGCQNVSYSLCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGGQDCTEDFEFHSAKAQKLWKNLKIGSVRPC 440 GS+ S+ED + RI V+ + G ++ S VCDACP C+D C + C GC + R +L+ S V + + +GG P++++ + + SY+LCE+RR + +CW+V++G VYDVT L HP G ++ + AGG+DC EDF FHS A+K W+ +IGS+ C Sbjct: 207 GSAAAAVASLED----AAQRIAVDPDSGHSYFVERSTVCDACPYCEDTCEVAWCNGCDETRMHLEEAYGKLMLSAAEVAGAGGRHGGGGGGCETGADNGGGSRLKLAPVLSRRYP-------RKSSYTLCEVRRRKVTGACWVVSQGSVYDVTAALPDHPGGKRSVLKNAGGRDCAEDFFFHSRAAKKQWRQYRIGSLVAC 396
BLAST of EWM21570.1 vs. NCBI_GenBank
Match: gi|698795590|ref|XP_009830824.1| (hypothetical protein H257_07099 [Aphanomyces astaci] >gi|574114400|gb|ETV79888.1| hypothetical protein H257_07099 [Aphanomyces astaci]) HSP 1 Score: 107.071 bits (266), Expect = 2.369e-23 Identity = 54/111 (48.65%), Postives = 61/111 (54.95%), Query Frame = 0 Query: 364 VSYSLCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGGQDCTEDFEFHSAKAQKLWKNLKIGSVRPCPGDRQSRRSRGGDDRSSRSGSDLGSLVGSSCSIM 474 V LCE++RHR+L SCWLVA G VYDVTN + HPAG + RKAGG DCT+D FHS AQ+ WK IG PC GDD G SCSIM Sbjct: 99 VKLCLCEVKRHRSLTSCWLVANGIVYDVTNVIQQHPAGTKCILRKAGGVDCTQDLRFHSKDAQRCWKQCAIGKFLPC-----------GDDNG-------GDAAQGSCSIM 191
BLAST of EWM21570.1 vs. NCBI_GenBank
Match: gi|673042559|ref|XP_008875240.1| (hypothetical protein H310_10590 [Aphanomyces invadans] >gi|574468913|gb|ETV95929.1| hypothetical protein H310_10590 [Aphanomyces invadans]) HSP 1 Score: 106.686 bits (265), Expect = 3.077e-23 Identity = 51/107 (47.66%), Postives = 63/107 (58.88%), Query Frame = 0 Query: 368 LCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGGQDCTEDFEFHSAKAQKLWKNLKIGSVRPCPGDRQSRRSRGGDDRSSRSGSDLGSLVGSSCSIM 474 LCE++RHR+L+SCWLVA G VYDVTN + HPAG + RKAGG DCT+D FHS +AQ+ WK +G + PC G D GS SC+IM Sbjct: 99 LCEVKRHRSLSSCWLVANGIVYDVTNVIQQHPAGTKCILRKAGGVDCTQDLRFHSKEAQQCWKQCAVGKLLPC-------------------GDDDGSTSQDSCTIM 186
BLAST of EWM21570.1 vs. NCBI_GenBank
Match: gi|564278286|gb|ETB59705.1| (hypothetical protein YYC_03121 [Plasmodium yoelii 17X]) HSP 1 Score: 102.834 bits (255), Expect = 1.515e-21 Identity = 53/157 (33.76%), Postives = 80/157 (50.96%), Query Frame = 0 Query: 289 CDACPSCDDVCTLQDCRGCQKKRERLLAS----GIMVVQEAWGRTTRKRPLQENSLSGGACVPIMAKPHGSAKGDGCQNVSYSLCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGGQDCTEDFEFHSAKAQ-KLWKNLKIGSVRPC 440 C+AC C+DVC + C+ C+ KR+ L + + Q R+ L + ++ + K +++ CEI+RH + CW+VA G VYDVT ++ +HP G + KA D + DF FHS AQ K+W++LKIG V PC Sbjct: 60 CNACEFCEDVCLFEFCKKCEMKRKELYIKYKKYDLKIYQNKLNRSIILNALTHKN--------VLTNEYTKMKEIRDYKKNFTFCEIKRHCNIDDCWVVANGNVYDVTKFIENHPGGINCILNKATN-DVSVDFSFHSKYAQTKIWESLKIGRVIPC 207
BLAST of EWM21570.1 vs. NCBI_GenBank
Match: gi|1173960578|gb|OQS06692.1| (hypothetical protein THRCLA_01269 [Thraustotheca clavata]) HSP 1 Score: 101.293 bits (251), Expect = 2.096e-21 Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = 0 Query: 368 LCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGGQDCTEDFEFHSAKAQKLWKNLKIGSVRPCPGD 443 LCE++RHR+ SCWLVA G VYDVT+ ++ HPAG + RKAGG+DCT+D +FHS A+ W +IG ++PC D Sbjct: 103 LCEVKRHRSATSCWLVANGIVYDVTDIMNQHPAGTKCILRKAGGEDCTKDMKFHSKAARNCWSKCQIGKLQPCGED 178
BLAST of EWM21570.1 vs. NCBI_GenBank
Match: gi|669145480|ref|XP_008608302.1| (hypothetical protein SDRG_04405 [Saprolegnia diclina VS20] >gi|530739733|gb|EQC37975.1| hypothetical protein SDRG_04405 [Saprolegnia diclina VS20]) HSP 1 Score: 99.7525 bits (247), Expect = 1.164e-20 Identity = 54/135 (40.00%), Postives = 76/135 (56.30%), Query Frame = 0 Query: 320 MVVQEAWGRTTRKR--PLQ-----ENSLSGGACVPIMAKPHGSAKGDGC----QNVSYS---LCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGGQDCTEDFEFHSAKAQKLWKNLKIGSVRPC 440 M+ E R RKR L+ + + + + V ++ P S K C + SY LCE+++HR+ ASCWLVA G VYDVT+ ++ HPAG + RK+GG DC +D +FHS AQ W KIG ++PC Sbjct: 52 MIANEQTLRKERKRCKSLELVYSDDEASTATSTVSLVTTPPSSTKKGNCVVQTRCTSYEKLCLCEVKQHRSAASCWLVANGIVYDVTDVMAQHPAGIKCILRKSGGVDCAQDMKFHSKAAQSCWSKCKIGMLQPC 186
BLAST of EWM21570.1 vs. NCBI_GenBank
Match: gi|1173942291|gb|OQR91315.1| (hypothetical protein ACHHYP_04793 [Achlya hypogyna]) HSP 1 Score: 99.3673 bits (246), Expect = 1.387e-20 Identity = 41/76 (53.95%), Postives = 53/76 (69.74%), Query Frame = 0 Query: 368 LCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGGQDCTEDFEFHSAKAQKLWKNLKIGSVRPCPGD 443 LCE++RHR+ +SCWLVA G VYDVT+ ++ HPAG + RK+GG DC +D +FHS AQ W KIG + PC D Sbjct: 111 LCEVKRHRSASSCWLVANGIVYDVTDVMAQHPAGTKCILRKSGGMDCAQDMKFHSKAAQSCWSKCKIGMLLPCGDD 186
BLAST of EWM21570.1 vs. NCBI_GenBank
Match: gi|397587408|gb|EJK53908.1| (hypothetical protein THAOC_26563 [Thalassiosira oceanica]) HSP 1 Score: 96.2857 bits (238), Expect = 7.727e-20 Identity = 42/80 (52.50%), Postives = 51/80 (63.75%), Query Frame = 0 Query: 366 YSLCEIRRHRTLASCWLVAKGQVYDVTNYLSSHPAGAIAMARKAGG-QDCTEDFEFHSAKAQKLWKNLKIGSVRPCPGDR 444 ++ CE+R+H SCWL VYD T+YL SHP G A+ RK+GG DCTEDF FH K QK W+ KIG + PCP R Sbjct: 89 FTACEVRKHNRPESCWLTVGNNVYDATDYLHSHPGGVQAILRKSGGVSDCTEDFNFHRRKGQKEWQRFKIGKLIPCPCQR 168
BLAST of EWM21570.1 vs. NCBI_GenBank
Match: gi|219117871|ref|XP_002179722.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408775|gb|EEC48708.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 96.6709 bits (239), Expect = 8.419e-20 Identity = 57/163 (34.97%), Postives = 75/163 (46.01%), Query Frame = 0 Query: 283 IQPSVVCDACPSCDDVCTLQDCRGCQKKRERLLASGIMVVQEAWGRTTRKRPLQENSLSGGACVPIMAKPHGSAKGDGCQNVSYSLCEIRRHRTLASCWLVAKGQVYDVTNYLS--SHPAGAIAMARKAGG-QDCTEDFEFHSAKAQKLWKNLKIGSVRPCPG 442 + CDACP C DVC +C C +K TR P C P + G Y++C++RRH S WLVA +YD T+Y+ SHP GA ++ RKAGG QDC +D +FHS + WK +IG +RPC G Sbjct: 37 VDYKTTCDACPCCRDVCDNPECLSCDEK-------------------TRYLP----------CPPCQGREQGY----------YTMCQVRRHNNKDSAWLVAGDTIYDATSYMQQDSHPGGAASILRKAGGVQDCLQDLQFHSKAGVRTWKKYEIGKLRPCEG 160 The following BLAST results are available for this feature:
BLAST of EWM21570.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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