EWM21602.1, cds9093 (CDS) Nannochloropsis gaditana

Overview
NameEWM21602.1
Unique Namecds9093
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:387354..387378 +
Alignment locationKK037251.1:387491..387879 +
Alignment locationKK037251.1:387967..387969 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21602.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100012g74.1934.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:387354..387378 +
KK037251.1supercontigKK037251.1:387491..387879 +
KK037251.1supercontigKK037251.1:387967..387969 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21602.1 vs. NCBI_GenBank
Match: gi|585101857|gb|EWM21602.1| (hypothetical protein Naga_100012g74 [Nannochloropsis gaditana])

HSP 1 Score: 283.493 bits (724), Expect = 8.466e-97
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 
Query:    1 MLRRKKELGLTSRMHQAWHLPPTCHCTLQKVPATEDNKIYMASAQARSSSCSLSNSPAQIKTLMSTEVSSEQSTVLSERPGINIVFKALRDHLPSAVGKNPSLTGNGSGLLQRQKLWIQLRTQRLEAARATKALEEVA 138
            MLRRKKELGLTSRMHQAWHLPPTCHCTLQKVPATEDNKIYMASAQARSSSCSLSNSPAQIKTLMSTEVSSEQSTVLSERPGINIVFKALRDHLPSAVGKNPSLTGNGSGLLQRQKLWIQLRTQRLEAARATKALEEVA
Sbjct:    1 MLRRKKELGLTSRMHQAWHLPPTCHCTLQKVPATEDNKIYMASAQARSSSCSLSNSPAQIKTLMSTEVSSEQSTVLSERPGINIVFKALRDHLPSAVGKNPSLTGNGSGLLQRQKLWIQLRTQRLEAARATKALEEVA 138
The following BLAST results are available for this feature:
BLAST of EWM21602.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101857|gb|EWM21602.1|8.466e-97100.00hypothetical protein Naga_100012g74 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9123rna9123Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications