EWM21573.1, cds9088 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21573.1 vs. NCBI_GenBank
Match: gi|585101828|gb|EWM21573.1| (checkpoint protein hus1 [Nannochloropsis gaditana]) HSP 1 Score: 435.261 bits (1118), Expect = 1.565e-154 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0 Query: 1 MKFRAGLAAKDLGNLNGVAQCFERFGPSCLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRMKLAKRAGQPCICLEARALDMELLHEVPIRVMRAADIQYYMPPDVAMPRVQLELPYNRSMRTVLEVGRKSGSHNACVRIAGNGWRPYGGLDIALWSAYFEEPLRFVCPMVRFL 211 MKFRAGLAAKDLGNLNGVAQCFERFGPSCLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRMKLAKRAGQPCICLEARALDMELLHEVPIRVMRAADIQYYMPPDVAMPRVQLELPYNRSMRTVLEVGRKSGSHNACVRIAGNGWRPYGGLDIALWSAYFEEPLRFVCPMVRFL Sbjct: 1 MKFRAGLAAKDLGNLNGVAQCFERFGPSCLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRMKLAKRAGQPCICLEARALDMELLHEVPIRVMRAADIQYYMPPDVAMPRVQLELPYNRSMRTVLEVGRKSGSHNACVRIAGNGWRPYGGLDIALWSAYFEEPLRFVCPMVRFL 211
BLAST of EWM21573.1 vs. NCBI_GenBank
Match: gi|298708772|emb|CBJ30733.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 155.221 bits (391), Expect = 3.529e-43 Identity = 71/163 (43.56%), Postives = 113/163 (69.33%), Query Frame = 0 Query: 1 MKFRAGLAAKDLGNLNGVAQCFERFGPSCLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRMKLAKRAGQPCICLEARALDMELLHEVPIRVMRAADIQYYMPPDVAMPRVQLELPYNRSMRTVLE 163 M+F+A + L GV E+ G +C+++L+E + + + GS+ V ++E+ Q+ +F EYRI S A N+ILFE S L++A +S KT+ ++KLAKRAGQPC+ +E RAL++E++H++P++VM A + +YY+PP V P+VQLELP RS+RTV++ Sbjct: 1 MRFKAKIVQDKLLAFAGVIGAIEKIGTACVVHLTETRVHLSVQESGSEGVDVYAELIQDMLFHEYRIESRAGNAILFEANASLLLQALNSGKTSPTCQIKLAKRAGQPCLSIETRALEIEVVHDIPVKVMPANEAEYYLPPKVHSPQVQLELPRQRSLRTVVD 163
BLAST of EWM21573.1 vs. NCBI_GenBank
Match: gi|301121879|ref|XP_002908666.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262099428|gb|EEY57480.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 102.064 bits (253), Expect = 1.260e-22 Identity = 52/169 (30.77%), Postives = 96/169 (56.80%), Query Frame = 0 Query: 1 MKFRAGLAAKDLGNLNGVAQCFERFGPS------CLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRMKLAKRAGQPCICLEARALDMELLHEVPIRVMRAADIQYYMPPDVAMPRVQLELPYNRSMRTVLE 163 M+FR LA L L VAQ F R G S C+ L+ ++ A G++E+++F+ +Q ++F + + S A N I F + + +A +S K A V ++L KR G +CL RA+D++++ +PI V+ + +++Y P V P++ +E+P R++R++++ Sbjct: 1 MRFRGTLAKDALAVLLDVAQSFARLGSSSSAKTNCVFTLTPETLSIALKSGGAEELQSFARLQTARLFHDVVVQSRAENHIGFLCDVRHFQQALTSGKDASAVMLRLLKRDGHNFLCLRTRAVDIDIVQSIPIEVLAMSTVEHYREPSVPAPQIAIEMPPLRALRSIVD 169
BLAST of EWM21573.1 vs. NCBI_GenBank
Match: gi|1214695514|gb|OWZ09274.1| (hypothetical protein PHMEG_00018046 [Phytophthora megakarya]) HSP 1 Score: 100.523 bits (249), Expect = 4.246e-22 Identity = 53/169 (31.36%), Postives = 96/169 (56.80%), Query Frame = 0 Query: 1 MKFRAGLAAKDLGNLNGVAQCFERFG------PSCLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRMKLAKRAGQPCICLEARALDMELLHEVPIRVMRAADIQYYMPPDVAMPRVQLELPYNRSMRTVLE 163 M+FR LA L L VAQ F R G +C+ L+ +I A G++E+++F+ +Q ++F + + S A N I F + + +A +S K A V ++L KR G +CL RA+D++++ VPI V+ + +++Y P V P++ +E+P R++R++++ Sbjct: 1 MRFRGTLAKDALVVLLDVAQSFARLGSQSSAKTNCVFTLTPETISIALKSGGAEELQSFARLQTARLFHDVVVQSRAENHIGFLCDVRHFHQALTSGKDASAVMLRLLKRDGSNFLCLRTRAVDIDIVQSVPIEVLAMSTVEHYREPSVPAPQIAIEMPPLRALRSIVD 169
BLAST of EWM21573.1 vs. NCBI_GenBank
Match: gi|695390765|ref|XP_009519817.1| (hypothetical protein PHYSODRAFT_478616 [Phytophthora sojae] >gi|348684714|gb|EGZ24529.1| hypothetical protein PHYSODRAFT_478616 [Phytophthora sojae]) HSP 1 Score: 100.523 bits (249), Expect = 4.745e-22 Identity = 51/169 (30.18%), Postives = 96/169 (56.80%), Query Frame = 0 Query: 1 MKFRAGLAAKDLGNLNGVAQCFERFGP------SCLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRMKLAKRAGQPCICLEARALDMELLHEVPIRVMRAADIQYYMPPDVAMPRVQLELPYNRSMRTVLE 163 M+FR LA L L VAQ F R G +C+ L+ ++ A G++E+++F+ +Q ++F + + S A N I F + + +A +S K A V ++L KR G +CL RA+D++++ +PI V+ + +++Y P V P++ +E+P R++R++++ Sbjct: 1 MRFRGTLAKDALAVLLDVAQSFARLGSQSSAKANCVFTLTPETLSIALKSGGAEELQSFARLQTARLFHDVVVQSRAENHIGFVCDVRHFQQALTSGKDASAVMLRLLKRDGNNFLCLRTRAVDIDIVQSIPIEVLAMSTVEHYREPSVPAPQIAIEMPPLRALRSIVD 169
BLAST of EWM21573.1 vs. NCBI_GenBank
Match: gi|570316471|gb|ETO64419.1| (hypothetical protein F444_18054 [Phytophthora parasitica P1976]) HSP 1 Score: 100.523 bits (249), Expect = 4.896e-22 Identity = 51/169 (30.18%), Postives = 96/169 (56.80%), Query Frame = 0 Query: 1 MKFRAGLAAKDLGNLNGVAQCFERFG------PSCLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRMKLAKRAGQPCICLEARALDMELLHEVPIRVMRAADIQYYMPPDVAMPRVQLELPYNRSMRTVLE 163 M+FR LA L L VAQ F R G +C+ L+ ++ A G++E+++F+ +Q ++F + + S A N I F + + +A +S K A V ++L KR G +CL RA+D++++ +PI V+ + +++Y P V P++ +E+P R++R++++ Sbjct: 1 MRFRGTLAKDALAVLLDVAQSFARLGSQSSAKTNCVFTLTPETLSIALKSGGAEELQSFARLQTARLFHDVVVQSRAENHIGFLCDVRHFQQALTSGKNASAVMLRLLKRDGNNYLCLRTRAVDIDIVQSIPIEVLAMSTVEHYREPSVPAPQIAIEMPPLRALRSIVD 169
BLAST of EWM21573.1 vs. NCBI_GenBank
Match: gi|566012776|gb|ETI35687.1| (hypothetical protein F443_18031 [Phytophthora parasitica P1569] >gi|567950216|gb|ETK75933.1| hypothetical protein L915_17550 [Phytophthora parasitica] >gi|567978874|gb|ETL29360.1| hypothetical protein L916_17442 [Phytophthora parasitica] >gi|570940237|gb|ETP05494.1| hypothetical protein F441_17906 [Phytophthora parasitica CJ01A1] >gi|570940255|gb|ETP05512.1| hypothetical protein F441_17901 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 100.138 bits (248), Expect = 5.785e-22 Identity = 51/169 (30.18%), Postives = 96/169 (56.80%), Query Frame = 0 Query: 1 MKFRAGLAAKDLGNLNGVAQCFERFG------PSCLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRMKLAKRAGQPCICLEARALDMELLHEVPIRVMRAADIQYYMPPDVAMPRVQLELPYNRSMRTVLE 163 M+FR LA L L VAQ F R G +C+ L+ ++ A G++E+++F+ +Q ++F + + S A N I F + + +A +S K A V ++L KR G +CL RA+D++++ +PI V+ + +++Y P V P++ +E+P R++R++++ Sbjct: 1 MRFRGTLAKDALAVLLDVAQSFARLGSQSSAKTNCVFTLTPETLSIALKSGGAEELQSFARLQTARLFHDVVVQSRAENHIGFLCDVRHFQQALTSGKDASAVMLRLLKRDGNNYLCLRTRAVDIDIVQSIPIEVLAMSTVEHYREPSVPAPQIAIEMPPLRALRSIVD 169
BLAST of EWM21573.1 vs. NCBI_GenBank
Match: gi|675207507|ref|XP_008912638.1| (hypothetical protein PPTG_16643 [Phytophthora parasitica INRA-310] >gi|568008352|gb|ETL82572.1| hypothetical protein L917_17283 [Phytophthora parasitica] >gi|568038284|gb|ETM35820.1| hypothetical protein L914_17345 [Phytophthora parasitica] >gi|568087082|gb|ETN01957.1| hypothetical protein PPTG_16643 [Phytophthora parasitica INRA-310] >gi|570970522|gb|ETP33641.1| hypothetical protein F442_17871 [Phytophthora parasitica P10297] >gi|970635871|gb|KUF80662.1| Checkpoint protein hus1 [Phytophthora nicotianae] >gi|970657660|gb|KUF95516.1| Oral-facial-digital syndrome 1 protein [Phytophthora nicotianae]) HSP 1 Score: 100.138 bits (248), Expect = 6.223e-22 Identity = 51/169 (30.18%), Postives = 96/169 (56.80%), Query Frame = 0 Query: 1 MKFRAGLAAKDLGNLNGVAQCFERFG------PSCLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRMKLAKRAGQPCICLEARALDMELLHEVPIRVMRAADIQYYMPPDVAMPRVQLELPYNRSMRTVLE 163 M+FR LA L L VAQ F R G +C+ L+ ++ A G++E+++F+ +Q ++F + + S A N I F + + +A +S K A V ++L KR G +CL RA+D++++ +PI V+ + +++Y P V P++ +E+P R++R++++ Sbjct: 1 MRFRGTLAKDALAVLLDVAQSFARLGSQSSAKTNCVFTLTPETLSIALKSGGAEELQSFARLQTARLFHDVVVQSRAENHIGFLCDVRHFQQALTSGKDASAVMLRLLKRDGNNYLCLRTRAVDIDIVQSIPIEVLAMSTVEHYREPSVPAPQIAIEMPPLRALRSIVD 169
BLAST of EWM21573.1 vs. NCBI_GenBank
Match: gi|673019192|ref|XP_008863557.1| (hypothetical protein H310_01976 [Aphanomyces invadans] >gi|574480471|gb|ETW07464.1| hypothetical protein H310_01976 [Aphanomyces invadans]) HSP 1 Score: 100.138 bits (248), Expect = 6.765e-22 Identity = 56/165 (33.94%), Postives = 91/165 (55.15%), Query Frame = 0 Query: 1 MKFRAGLAAKDLGNLNGVAQCFERFGPS--CLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRMKLAKRAGQPCICLEARALDMELLHEVPIRVMRAADIQYYMPPDVAMPRVQLELPYNRSMRTVLE 163 M+FR L A L V+Q +R S C + L+E + FA G D V+ F + KVF + I S A+N+I F +G++N +A S K A + ++L KR G+ + L AR +D++++ +PI V+ A + Y P++ P V LE+P R++RT+ + Sbjct: 1 MRFRGHLTAASFPILMEVSQFMQRVSSSDMCFVVLNEERMSFAMKTSGED-VQTFVHLNIAKVFGDVVIESRADNNIAFALGIANFSRALQSGKEASGIMLRLLKRDGRSFLSLRARTVDLDIIQNIPIEVVSMATAESYREPNIPPPTVALEMPPLRALRTITD 164
BLAST of EWM21573.1 vs. NCBI_GenBank
Match: gi|953486803|emb|CEG48865.1| (checkpoint protein [Plasmopara halstedii]) HSP 1 Score: 97.8265 bits (242), Expect = 4.844e-21 Identity = 54/179 (30.17%), Postives = 97/179 (54.19%), Query Frame = 0 Query: 1 MKFRAGLAAKDLGNLNGVAQCFERFG------PSCLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRMKLAKRAGQPCICLEARALDMELLHEVPIRVMRAADIQYYMPPDVAMPRVQLELPYNRSMRTVLEVGRKSGSHNA 173 M+FR LA L L +AQ F R G +C+ L+ ++ A G++E+++F+ +Q ++F + + S A N I F + + +A +S K A V ++L KR G +CL RA+D++++ +PI V+ + I++Y P V P + +E+P R++R++ V + G H Sbjct: 1 MRFRGTLAKDALVVLLDIAQSFVRLGSQSSAKTNCVFTLTLETLSIALKSGGAEELQSFARLQTTRLFHDVVVQSRAENHIGFLCDMRHFQQALTSGKDASAVMLRLLKRDGSNFLCLRTRAVDIDIIQSIPIEVLAMSTIEHYQEPCVPAPDIAIEMPPLRALRSI--VDKLKGMHKT 177 The following BLAST results are available for this feature:
BLAST of EWM21573.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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