EWM21628.1, cds9075 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21628.1 vs. NCBI_GenBank
Match: gi|585101882|gb|EWM21627.1| (charged multivesicular body protein [Nannochloropsis gaditana]) HSP 1 Score: 457.988 bits (1177), Expect = 6.341e-163 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0 Query: 1 MGNMWAKKPLKEIMRENKRMINRAIRELDRERNNLEKNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMASAMRSVTSAMVSMNKQVNVPALTKIMTDFARENEKSELTGEMLGDAMDDAMTEEGDEEEQERIVGAVLTELGLDMTDAVPEAPGAVPNTATATAAATSSGGQREPQALGADPTMTDLEARLNNLRRE 226 MGNMWAKKPLKEIMRENKRMINRAIRELDRERNNLEKNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMASAMRSVTSAMVSMNKQVNVPALTKIMTDFARENEKSELTGEMLGDAMDDAMTEEGDEEEQERIVGAVLTELGLDMTDAVPEAPGAVPNTATATAAATSSGGQREPQALGADPTMTDLEARLNNLRRE Sbjct: 9 MGNMWAKKPLKEIMRENKRMINRAIRELDRERNNLEKNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMASAMRSVTSAMVSMNKQVNVPALTKIMTDFARENEKSELTGEMLGDAMDDAMTEEGDEEEQERIVGAVLTELGLDMTDAVPEAPGAVPNTATATAAATSSGGQREPQALGADPTMTDLEARLNNLRRE 234
BLAST of EWM21628.1 vs. NCBI_GenBank
Match: gi|585101883|gb|EWM21628.1| (charged multivesicular body protein [Nannochloropsis gaditana]) HSP 1 Score: 457.218 bits (1175), Expect = 9.673e-163 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0 Query: 1 MGNMWAKKPLKEIMRENKRMINRAIRELDRERNNLEKNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMASAMRSVTSAMVSMNKQVNVPALTKIMTDFARENEKSELTGEMLGDAMDDAMTEEGDEEEQERIVGAVLTELGLDMTDAVPEAPGAVPNTATATAAATSSGGQREPQALGADPTMTDLEARLNNLRRE 226 MGNMWAKKPLKEIMRENKRMINRAIRELDRERNNLEKNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMASAMRSVTSAMVSMNKQVNVPALTKIMTDFARENEKSELTGEMLGDAMDDAMTEEGDEEEQERIVGAVLTELGLDMTDAVPEAPGAVPNTATATAAATSSGGQREPQALGADPTMTDLEARLNNLRRE Sbjct: 1 MGNMWAKKPLKEIMRENKRMINRAIRELDRERNNLEKNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMASAMRSVTSAMVSMNKQVNVPALTKIMTDFARENEKSELTGEMLGDAMDDAMTEEGDEEEQERIVGAVLTELGLDMTDAVPEAPGAVPNTATATAAATSSGGQREPQALGADPTMTDLEARLNNLRRE 226
BLAST of EWM21628.1 vs. NCBI_GenBank
Match: gi|676378143|ref|XP_009032350.1| (hypothetical protein AURANDRAFT_18982 [Aureococcus anophagefferens] >gi|323456830|gb|EGB12696.1| hypothetical protein AURANDRAFT_18982 [Aureococcus anophagefferens]) HSP 1 Score: 259.996 bits (663), Expect = 1.327e-84 Identity = 137/230 (59.57%), Postives = 169/230 (73.48%), Query Frame = 0 Query: 1 MGNMWAKK-PLKEIMRENKRMINRAIRELDRERNNLEKNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMASAMRSVTSAMVSMNKQVNVPALTKIMTDFARENEKSELTGEMLGDAMDDAMTEEGDEEEQERIVGAVLTELGLDMTDAVPEAPGAVPN----TATATAAATSSGGQREPQALGADPTMTDLEARLNNLRR 225 MGN W +K PLKE++R+NKR IN+A+RELDRER NLEK E+KLI DIKKYA + QMG+VK MAKDLVRTR Y TKFIE+RSHL +LKL+TV+S EAMASAM+SVT AM+ MNK VNVPA+ KIM +F ENE++E+T EM+GD +DDAM ++GDEEE+E+IVGAVL E+G+ D VP AP PN A + T++DLEARLNNLR+ Sbjct: 1 MGNTWGRKVPLKEVLRKNKREINKAMRELDRERANLEKQEQKLIADIKKYAGQGQMGSVKIMAKDLVRTRTYITKFIELRSHLGAVSLKLQTVKSQEAMASAMKSVTQAMIKMNKTVNVPAVQKIMMNFQLENERAEMTQEMMGDMLDDAMEQDGDEEEEEKIVGAVLDEIGISFGDTVPAAPTLAPNQPQAADVPAAPVAVADAGGGGGGGADASTVSDLEARLNNLRK 230
BLAST of EWM21628.1 vs. NCBI_GenBank
Match: gi|299117086|emb|CBN73857.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 249.595 bits (636), Expect = 2.951e-80 Identity = 144/239 (60.25%), Postives = 172/239 (71.97%), Query Frame = 0 Query: 7 KKPLKEIMRENKRMINRAIRELDRERNNLEKNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMASAMRSVTSAMVSMNKQVNVPALTKIMTDFARENEKSELTGEMLGDAMDDAMTEEGDEEEQERIVGAVLTELGLDMTDAVPEAPGAVPNTATATAAATSSGGQREP--------------------QALGADPTMTDLEARLNNLRR 225 KKPLKEI+RENKR I RA+R++DRE+ NLEK EKKL+ +IKK AK QMGAVK +AKDLVRTRNY TKFIE RSHLQG LKLETVRSHEAMA AM+ VT AMVS+NKQVNVPAL KIM +FARENE+SELTGE++GD +DDA+ ++GD E +++IV VL E+G+ + VPEAP A A AA S+ R+P A G D M++LEARLNNLRR Sbjct: 11 KKPLKEILRENKRTITRAVRDIDREKANLEKQEKKLVGEIKKNAKAGQMGAVKVLAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMAGAMKDVTKAMVSLNKQVNVPALQKIMLEFARENERSELTGELIGDTLDDALADDGDAEAEDQIVSQVLDEIGVSFDEGVPEAPTA----GVAQGAAGSAEAARQPVAAAEASGGGGGGPQPPAPPGAGGGDAGMSELEARLNNLRR 245
BLAST of EWM21628.1 vs. NCBI_GenBank
Match: gi|1210532124|dbj|GAX09283.1| (charged multivesicular body protein 2A [Fistulifera solaris]) HSP 1 Score: 238.81 bits (608), Expect = 1.958e-76 Identity = 126/226 (55.75%), Postives = 163/226 (72.12%), Query Frame = 0 Query: 1 MGNMWAK-KPLKEIMRENKRMINRAIRELDRERNNLEKNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMASAMRSVTSAMVSMNKQVNVPALTKIMTDFARENEKSELTGEMLGDAMDDAMTEEGDEEEQERIVGAVLTELGLDMTDAVPEAPGAVPNTATATAAATSSGGQREPQALGADPTMTDLEARLNNLRR 225 MGN+ + KPLKE++RENKRMI RA+RELDRE+ LEK EK+L M+IKK A+ENQM VK +AKDLVRTR + KF+EMRSHLQG ALKL+T++SHEAMASAM+S AM MNK VNV +TK++ DF REN ++E+ E +GDA+DDAM +E EEE++R+V VL E+G+ + +PEA T + A + SG DP ++DLEARLNNL+R Sbjct: 1 MGNLLGRDKPLKEVLRENKRMITRAVRELDREKAQLEKEEKRLTMEIKKAARENQMTTVKILAKDLVRTRQHVAKFVEMRSHLQGVALKLQTLKSHEAMASAMQSTAKAMAKMNKAVNVQTITKMLADFERENARTEMMQEAMGDAIDDAMADETAEEEEDRVVNQVLDEIGISFGEELPEAAA-----GTISHAESESGKVAVAAGASDDPALSDLEARLNNLKR 221
BLAST of EWM21628.1 vs. NCBI_GenBank
Match: gi|223994509|ref|XP_002286938.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220978253|gb|EED96579.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 236.498 bits (602), Expect = 2.659e-75 Identity = 136/233 (58.37%), Postives = 167/233 (71.67%), Query Frame = 0 Query: 1 MGNMWAK-KPLKEIMRENKRMINRAIRELDRERNNLEKNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMASAMRSVTSAMVSMNKQVNVPALTKIMTDFARENEKSELTGEMLGDAMDDAMTEEGDEEEQERIVGAVLTELGLDMTDAVPEAP-------GAVPNTATATAAATSSGGQREPQALGADPTMTDLEARLNNLRR 225 MGN++ K KPLKE +RENKRMI RAIRELDRE +L++ E++L ++IKK A+ENQM AVK MAKDLVRTR Y TKFIEMRS LQG ALKL+TV+SH+AMA AM S AM MNK VNVP++ K+M +F REN KSE+ E++GDA+DD M E DEEE++RIVG VL E+G+DM +A+P AP AVP A G G DP ++DLEARLNNL+R Sbjct: 1 MGNIFGKEKPLKEQLRENKRMITRAIRELDRETRSLQREEQRLTLEIKKMARENQMKAVKIMAKDLVRTRQYITKFIEMRSQLQGCALKLQTVKSHQAMAEAMSSTAKAMSKMNKAVNVPSINKMMAEFERENMKSEMMQELMGDAIDDIMDEN-DEEEEDRIVGQVLDEIGIDMNEAIPNAPAMGLGASAAVPEDGGKVAVGIGETGGGGVSDGGEDPALSDLEARLNNLKR 232
BLAST of EWM21628.1 vs. NCBI_GenBank
Match: gi|1072238979|gb|OEU23706.1| (Snf7-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 235.343 bits (599), Expect = 5.652e-75 Identity = 130/230 (56.52%), Postives = 162/230 (70.43%), Query Frame = 0 Query: 1 MGNMWAK-KPLKEIMRENKRMINRAIRELDRERNNLEKNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMASAMRSVTSAMVSMNKQVNVPALTKIMTDFARENEKSELTGEMLGDAMDDAMTEEGDEEEQERIVGAVLTELGLDMTDAVPEAPGAVPNTATATAAATSSGGQREPQALGA----DPTMTDLEARLNNLRR 225 MGN+ K KPLKE++RENKRMI RAIRELDRE+ LE+ EKKL M+IKK AK QMG VK MAKDLVRTR Y TKFIEMRSHLQG ALKL+TV+SH AMA AM+S SAM MNK V+VPA+ K+M DF +EN K+E+ E++GDA+DD + E +EEE+E IV VL E+G+ + + P A P A + +G + G DP +++LEARLNNL+R Sbjct: 1 MGNILGKDKPLKEVLRENKRMITRAIRELDREKTGLEREEKKLTMEIKKCAKAGQMGPVKIMAKDLVRTRQYITKFIEMRSHLQGCALKLQTVKSHHAMAEAMKSTASAMHKMNKAVDVPAINKMMQDFEKENMKTEMMQEIMGDAIDDVLGGEENEEEEEAIVNQVLDEIGISFGE---DLPSAAPTNAIGAQESAPTGKVAMSETPGGGPSDDPALSELEARLNNLKR 227
BLAST of EWM21628.1 vs. NCBI_GenBank
Match: gi|1210527987|dbj|GAX13102.1| (charged multivesicular body protein 2A [Fistulifera solaris]) HSP 1 Score: 234.958 bits (598), Expect = 6.238e-75 Identity = 122/227 (53.74%), Postives = 165/227 (72.69%), Query Frame = 0 Query: 1 MGNMWAK-KPLKEIMRENKRMINRAIRELDRERNNLEKNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMASAMRSVTSAMVSMNKQVNVPALTKIMTDFARENEKSELTGEMLGDAMDDAMTEEGDEEEQERIVGAVLTELGLDMTDAVPE-APGAVPNTATATAAATSSGGQREPQALGADPTMTDLEARLNNLRR 225 MGN+ + KPLKE++RENKRMI RA+RELDRE+ LEK EK+L M+IKK A+ENQM VK +AKDLVRTR + KF+EMRSHLQG ALKL+T++SHEAMASAM+S M MNK VNV +TK++ DF REN ++E+ +++GDA+DDAM +E EEE++R+V VL E+G+ + +PE A G + + + + + G + DP ++DLEARLNNL+R Sbjct: 1 MGNLLGRDKPLKEVLRENKRMITRAVRELDREKAQLEKEEKRLTMEIKKAARENQMTTVKILAKDLVRTRQHVAKFVEMRSHLQGVALKLQTLKSHEAMASAMQSTAKVMAKMNKAVNVQTITKMLADFERENARTEMMQDVMGDAIDDAMADETAEEEEDRVVNQVLDEIGISFGEELPEAAAGMISHAESESGKVAVAAGASD------DPALSDLEARLNNLKR 221
BLAST of EWM21628.1 vs. NCBI_GenBank
Match: gi|219126389|ref|XP_002183441.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405197|gb|EEC45141.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 228.409 bits (581), Expect = 1.434e-72 Identity = 120/206 (58.25%), Postives = 155/206 (75.24%), Query Frame = 0 Query: 1 MGNMWAK-KPLKEIMRENKRMINRAIRELDRERNNLEKNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMASAMRSVTSAMVSMNKQVNVPALTKIMTDFARENEKSELTGEMLGDAMDDAMTEEGDEEEQERIVGAVLTELGLDMTDAVPEAPG-AVPNTATA----TAAATSSGG 200 MGN+W + KPLKE++RENKRMINRA+RELDRE+ LE+ EK+L ++IKK AKENQM +VK MAKDLVRTR Y TKFIEMRSHLQG ALKL+TV+SH+AMA AM++ AM MNK VNVP +TK+M +F +EN ++++ E++GDA+DDA+ EG EEE++RIVG VL E+G+ + +P G VP A AA + GG Sbjct: 1 MGNVWGRDKPLKEVLRENKRMINRAVRELDREKAGLEREEKRLTIEIKKAAKENQMQSVKIMAKDLVRTRQYITKFIEMRSHLQGCALKLQTVKSHQAMAEAMQNTAKAMGKMNKAVNVPTITKMMAEFEKENARTDMMQEVMGDAIDDALEGEGTEEEEDRIVGQVLDEIGITFGEELPATAGLTVPTNGVAEGPTKVAAVAGGG 206
BLAST of EWM21628.1 vs. NCBI_GenBank
Match: gi|294897092|ref|XP_002775819.1| (Charged multivesicular body protein 2A, putative [Perkinsus marinus ATCC 50983] >gi|239882172|gb|EER07635.1| Charged multivesicular body protein 2A, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 224.172 bits (570), Expect = 3.644e-70 Identity = 132/255 (51.76%), Postives = 171/255 (67.06%), Query Frame = 0 Query: 1 MGNMWAKKPLKEIMRENKRMINRAIRELDRERNNLEKNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMASAMRSVTSAMVSMNKQVNVPALTKIMTDFARENEKSELTGEMLGDAMDDAMTEEGDEEEQERIVGAVLTELGLDMTDAVPEAPG-AVP--------------NTATATAAATSSG---GQREPQ------ALGADPTM------TDLEARLNNLRR 225 MGN +K L+E MR NKRMINRA+RELDRER L++NE+KLI DIK+ AK+NQMG VK MAKDLVRTR Y++KF+EM+SHLQG +L+++TV+S EAMA +M+ T AM MNKQ+N+P L KIM +F E EK LT E++GD +DD + E GDEEE+E IVG VL E+G+DM + + APG A+P A A AAT+SG G+++ + G DP DLE+RLN L+R Sbjct: 1 MGNQPSKLTLEEQMRANKRMINRAVRELDRERMGLQRNEQKLITDIKQAAKKNQMGPVKIMAKDLVRTRRYESKFMEMKSHLQGVSLRMQTVKSTEAMARSMKGCTQAMARMNKQLNLPQLQKIMQEFQEETEKMGLTEEVMGDTIDDVLGEVGDEEEEEAIVGQVLEEIGVDMNEVLANAPGSALPAGQKASVGVGKKTQQQAVAEGAATASGRTSGRQDNKENNRGNGDGGDPPSPPPPPENDLESRLNALKR 255 The following BLAST results are available for this feature:
BLAST of EWM21628.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|