EWM21646.1, cds9067 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21646.1 vs. NCBI_GenBank
Match: gi|585101901|gb|EWM21646.1| (splicing factor u2af large subunit [Nannochloropsis gaditana]) HSP 1 Score: 1197.96 bits (3098), Expect = 0.000e+0 Identity = 593/593 (100.00%), Postives = 593/593 (100.00%), Query Frame = 0 Query: 1 MPGSEDDASGPGAAALPGEEESQPPAVRTEGEGASEALSSNGTGHKGGDVHEEEGRGKEEMGGPNGKERHGDRDEDEEEVASKEKRRERRRHSSRSRSRSPRGGSRGSRRDKRRSRSRSESPRGDRRRRSRDREGKSSRRSRRSASGSRSLSPPSSRRRRRRERANNWDKPPEGLTVGQGAVTATLQGLGGLGLSGSGAGQFMDPPMLDPGVMMGTAALGAGGVVRGAIGTLTAPTAPPNQQELFNGVMVPTMMLRQAKRLYVGNVPMGCDQFVLMQLFNQAMVAAGKGSATAPPIVGVQVNESKPFAFLETRTPEDAANVLLFDGITIGANQLKVRRPKDFKPLPGIVDPPTGVSLIPGHLPTSVENTENKIYLGSIPTHFNDLQVRELVSAFGNLKAFNLVKDPALGTSKGFCFFEYLDHALTDRVCAELNGFELGERKLICQRANPSPAPAAAPSMAALAGGSMHPYAALLTGSSAAAAPLGPATKVLKLSNMVVAEELRDDNEYEEIVMDIKEECGKYGQVVSLKVPRPSYKEDGSVDVSPPGVGEVFVEFADEDGATKAGNALRNRQFSGRTVVCEFVKEEDYAGGNL 593 MPGSEDDASGPGAAALPGEEESQPPAVRTEGEGASEALSSNGTGHKGGDVHEEEGRGKEEMGGPNGKERHGDRDEDEEEVASKEKRRERRRHSSRSRSRSPRGGSRGSRRDKRRSRSRSESPRGDRRRRSRDREGKSSRRSRRSASGSRSLSPPSSRRRRRRERANNWDKPPEGLTVGQGAVTATLQGLGGLGLSGSGAGQFMDPPMLDPGVMMGTAALGAGGVVRGAIGTLTAPTAPPNQQELFNGVMVPTMMLRQAKRLYVGNVPMGCDQFVLMQLFNQAMVAAGKGSATAPPIVGVQVNESKPFAFLETRTPEDAANVLLFDGITIGANQLKVRRPKDFKPLPGIVDPPTGVSLIPGHLPTSVENTENKIYLGSIPTHFNDLQVRELVSAFGNLKAFNLVKDPALGTSKGFCFFEYLDHALTDRVCAELNGFELGERKLICQRANPSPAPAAAPSMAALAGGSMHPYAALLTGSSAAAAPLGPATKVLKLSNMVVAEELRDDNEYEEIVMDIKEECGKYGQVVSLKVPRPSYKEDGSVDVSPPGVGEVFVEFADEDGATKAGNALRNRQFSGRTVVCEFVKEEDYAGGNL Sbjct: 1 MPGSEDDASGPGAAALPGEEESQPPAVRTEGEGASEALSSNGTGHKGGDVHEEEGRGKEEMGGPNGKERHGDRDEDEEEVASKEKRRERRRHSSRSRSRSPRGGSRGSRRDKRRSRSRSESPRGDRRRRSRDREGKSSRRSRRSASGSRSLSPPSSRRRRRRERANNWDKPPEGLTVGQGAVTATLQGLGGLGLSGSGAGQFMDPPMLDPGVMMGTAALGAGGVVRGAIGTLTAPTAPPNQQELFNGVMVPTMMLRQAKRLYVGNVPMGCDQFVLMQLFNQAMVAAGKGSATAPPIVGVQVNESKPFAFLETRTPEDAANVLLFDGITIGANQLKVRRPKDFKPLPGIVDPPTGVSLIPGHLPTSVENTENKIYLGSIPTHFNDLQVRELVSAFGNLKAFNLVKDPALGTSKGFCFFEYLDHALTDRVCAELNGFELGERKLICQRANPSPAPAAAPSMAALAGGSMHPYAALLTGSSAAAAPLGPATKVLKLSNMVVAEELRDDNEYEEIVMDIKEECGKYGQVVSLKVPRPSYKEDGSVDVSPPGVGEVFVEFADEDGATKAGNALRNRQFSGRTVVCEFVKEEDYAGGNL 593
BLAST of EWM21646.1 vs. NCBI_GenBank
Match: gi|808883035|gb|KKF30294.1| (Splicing factor U2AF [Larimichthys crocea]) HSP 1 Score: 289.656 bits (740), Expect = 1.948e-87 Identity = 192/506 (37.94%), Postives = 258/506 (50.99%), Query Frame = 0 Query: 83 KEKRRERRRHSSRSRSRSPRGGSRGSRRDKRRSRSRSESPRGDRRRRSRDREGKSSRRSRRSASGSRSLSPPSSRRRRRRERANNWDKPPEGLTVGQGAVTATLQGLGGLGLSGSGAGQFMDPPMLDPGVMMGTAALGAGGVVRGAIGTLTAPTAPPNQQELFNGVMVPTMMLRQAKRLYVGNVPMGCDQFVLMQLFNQAMVAAGKGSATAPPIVGVQVNESKPFAFLETRTPEDAANVLLFDGITIGANQLKVRRPKDFKPLPGIVDPPTGVSLIPGHLPTSVENTENKIYLGSIPTHFNDLQVRELVSAFGNLKAFNLVKDPALGTSKGFCFFEYLDHALTDRVCAELNGFELGERKLICQRANPSPAPAAAPSMAALAGGSMHPYAALLTGSSAAAAPLGPATKVLKLSNMVVAEELRDDNEYEEIVMDIKEECGKYGQVVSLKVPRPSYKEDGSVDVSPPGVGEVFVEFADEDGATKAGNALRNRQFSGRTVVCEFVKEEDY 588 K +RER RH RSRS SP R DK RS S+ R +R RRS S SP RR R++ WD PP G +Q AGQ +L G AA APT P +V + M RQA+RLYVGN+P G + + + FN M AG A + P++ VQ+N+ K FAFLE R+ ++ + FDGI LK+RRP D++PLPGI + P +PG + T V ++ +K+++G +P + ND QV+EL+++FG LKAFNLVKD A SKG+ F EY+D + TD+ A LNG +LG++KLI QRA+ A S+ P L S G T+VL L NMV+ EEL DD +YEEI+ DI+EEC KYG V S+++PRP DG V PG G++FVE+ KA AL R+F+ R VV ++ + Y Sbjct: 47 KTLQRERERHKKRSRSGSP------GRGDKHRSWSKDRGSRSREKRSRSRDRKSRDRRSSSRDHKKHSHSP---RRTRKKRTCKYWDVPPPGFEHITPMQYKAMQ----------AAGQIPTIALLATSTTTGVAA---------------APTQVP---------IVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQAPSNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQPA--FHVPGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAFCEYVDVSATDQAVAGLNGMQLGDKKLIVQRASVGAKNANPTSIIETPVTLQVPGLQRLQNS-------GMPTEVLCLLNMVMPEELVDDEDYEEILEDIREECCKYGSVRSIEIPRPV---DG---VEVPGCGKIFVEYVSAADCQKAMQALTGRKFANRVVVTKYYDPDMY 494
BLAST of EWM21646.1 vs. NCBI_GenBank
Match: gi|198432988|ref|XP_002130386.1| (PREDICTED: splicing factor U2AF 50 kDa subunit [Ciona intestinalis]) HSP 1 Score: 287.345 bits (734), Expect = 7.958e-87 Identity = 153/343 (44.61%), Postives = 209/343 (60.93%), Query Frame = 0 Query: 252 TMMLRQAKRLYVGNVPMGCDQFVLMQLFNQAMVAAGKGSATAPPIVGVQVNESKPFAFLETRTPEDAANVLLFDGITIGANQLKVRRPKDFKPLPGIVDPPTGVSLIPGHLPTSVENTENKIYLGSIPTHFNDLQVRELVSAFGNLKAFNLVKDPALGTSKGFCFFEYLDHALTDRVCAELNGFELGERKLICQRANPSPAPAAAPSMAALAGGSMHPYAALLTGSS------AAAAPLGPATKVLKLSNMVVAEELRDDNEYEEIVMDIKEECGKYGQVVSLKVPRPSYKEDGSVDVSPPGVGEVFVEFADEDGATKAGNALRNRQFSGRTVVCEFVKEEDY 588 + M RQA+RLYVGN+P G + +M FN M AG A PI+ VQ+N K FAFLE R+ ++ L FDGI LK+RRP D+KPLPG ++ P +PG + T V+++++K+++G +P + ND QV+EL+++FG L+AFNLVKD A SKG+ F E+ D++LTD+ A LNG +LG++KLI QRA+ G +P+ A++ + A A GPAT VL L NMV+ EEL DD EYEEI+ D+K+ECGK G VVSL++PRP G GVG+++VEFA+ KA AL R+FS R VV F E Y Sbjct: 155 SQMTRQARRLYVGNIPFGVTEDAMMDFFNNQMQIAGLAQAPGQPILAVQINLDKNFAFLEFRSVDETTQALAFDGINFMNQSLKIRRPSDYKPLPGSLEQPA--IHLPGVISTVVQDSQHKMFIGGLPNYLNDDQVKELLTSFGPLRAFNLVKDSATALSKGYAFAEFADYSLTDQAIAGLNGMQLGDKKLIVQRAS--------------IGAKNNPHGAIMAPVTLQIPGMAHATGAGPATTVLCLMNMVLPEELTDDEEYEEIMEDVKDECGKLGSVVSLEIPRP-----GPGLTEADGVGKIYVEFANHLDTQKAAQALSGRKFSNRVVVTSFFDPERY 476
BLAST of EWM21646.1 vs. NCBI_GenBank
Match: gi|1007788995|ref|XP_015830883.1| (PREDICTED: splicing factor U2AF 65 kDa subunit-like [Nothobranchius furzeri]) HSP 1 Score: 286.189 bits (731), Expect = 1.450e-86 Identity = 195/530 (36.79%), Postives = 266/530 (50.19%), Query Frame = 0 Query: 71 GDRDEDEEEVASKEKRRERRRHSSRSRSRSPRGGSRGSRRDKRRSRSRSESPRGDRRRRSRDREGKSSRRSRRSASGSRSLSPPSSRRRRRRERANNWDKPPEGLTVGQGAVTATLQGLGGLGLSGSGAGQFMDPPMLDPGVMMGTAALGAGGVVRGAIGTLTAPTAPPNQQELFNGVMVPTMMLRQAKRLYVGNVPMGCDQFVLMQLFNQAMVAAGKGSATAPPIVGVQVNESKPFAFLETRTPEDAANVLLFDGITIGANQLKVRRPKDFKPLPGIVDPPTGVSLIPGHLPTSVENTENKIYLGSIPTHFNDLQVRELVSAFGNLKAFNLVKDPALGTSKGFCFFEYLDHALTDRVCAELNGFELGERKLICQR-------ANP-----SPAPAAAPSMAALAGGSMHPYAALLTGSSAAAAPLGPATKVLKLSNMVVAEELRDDNEYEEIVMDIKEECGKYGQVVSLKVPRPSYKEDGSVDVSPPGVGEVFVEFADEDGATKAGNALRNRQFSGRTVVCEFVKEEDY 588 D DE E++++ + RER RH RSRS SP G DK RS S+ R +R RRS S SP RR R++ WD PP G +Q AGQ +L G AA APT P +V + M RQA+RLYVGN+P G + + + FN M AG A + P++ VQ+N+ K FAFLE R+ ++ + FDGI LK+RRP D++PLPG+ + P +PG + T V ++ +K+++G +P + ND QV+EL+++FG LKAFNLVKD A SKG+ F EY+D + TD+ A LNG +LG++KLI QR ANP +P P + L SM T+VL L NMV+ EEL DD +YEEI+ DI+EEC KYG V S+++PRP DG V PG G++FVE+ KA AL R+F+ R VV ++ + Y Sbjct: 2 SDFDEFEKQLSENRQERERERHKKRSRSESPERG------DKHRSWSKDRGSRSREKRSRSRDRKSRDRRSSSRDHKKHSHSP---RRTRKKRICKYWDVPPPGFEHITPMQYKAMQ----------AAGQIPTIALLATSTTTGVAA---------------APTPVP---------IVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQALSNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGLSEQPA--FHVPGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAFCEYVDISATDQAVAGLNGMQLGDKKLIVQRASVGAKNANPTSIIETPVTLQVPGLQRLQNTSM-------------------PTEVLCLLNMVMPEELVDDEDYEEILEDIREECCKYGNVRSMEIPRPV---DG---VEVPGCGKIFVEYISAADCQKAMQALTGRKFANRVVVTKYYDPDMY 461
BLAST of EWM21646.1 vs. NCBI_GenBank
Match: gi|929365407|ref|XP_014092345.1| (PREDICTED: splicing factor U2AF 50 kDa subunit [Bactrocera oleae]) HSP 1 Score: 282.722 bits (722), Expect = 9.141e-86 Identity = 154/347 (44.38%), Postives = 212/347 (61.10%), Query Frame = 0 Query: 249 MVPTMMLRQAKRLYVGNVPMGCDQFVLMQLFNQAMVAAGKGSATAPPIVGVQVNESKPFAFLETRTPEDAANVLLFDGITIGANQLKVRRPKDFKPLPGIVD-PPTGVSLIPGHLPTSVENTENKIYLGSIPTHFNDLQVRELVSAFGNLKAFNLVKDPALGTSKGFCFFEYLDHALTDRVCAELNGFELGERKLICQRAN------PSPAPAAAPSMAALAGGSMHPYAALLTGSSAAAAPLGPATKVLKLSNMVVAEELRDDNEYEEIVMDIKEECGKYGQVVSLKVPRPSYKEDGSVDVSPPGVGEVFVEFADEDGATKAGNALRNRQFSGRTVVCEFVKEEDY 588 +V + + RQA+RLYVGN+P G + +M+ FNQ M G A P++ Q+N K FAFLE R+ ++ + FDGI LK+RRP D++P+PG+ D PP + G + T V ++ +KI++G +P + N+ QV+EL+ +FG L+AFNLVKD A G SKG+ F EY+DH++TD+ A LNG +LG++KLI QRA+ + A AAP M + G SM G+S GP T+VL L NMV +ELRD+ EYE+I+ DIKEEC KYG V S+++PRP VDV PG G+VFVEF KA AL R+FS R VV + + Y Sbjct: 95 VVGSTITRQARRLYVGNIPFGVTEDEMMEFFNQQMHLTGLAQAAGSPVLACQINLDKNFAFLEFRSTDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGVADAPPITAPVANGVISTVVPDSPHKIFIGGLPNYLNEEQVKELLLSFGQLRAFNLVKDAATGLSKGYAFSEYVDHSITDQAIAGLNGMQLGDKKLIVQRASVGAKNAQNSATTAAPVMIQVPGMSM-------VGTS------GPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECNKYGVVRSVEIPRPI----EGVDV--PGCGKVFVEFNSVMDCQKAQQALTGRKFSDRVVVTSYFDPDKY 422
BLAST of EWM21646.1 vs. NCBI_GenBank
Match: gi|1079784255|ref|XP_018517051.1| (PREDICTED: splicing factor U2AF 65 kDa subunit-like [Lates calcarifer]) HSP 1 Score: 283.878 bits (725), Expect = 1.007e-85 Identity = 194/517 (37.52%), Postives = 265/517 (51.26%), Query Frame = 0 Query: 72 DRDEDEEEVASKEKRRERRRHSSRSRSRSPRGGSRGSRRDKRRSRSRSESPRGDRRRRSRDREGKSSRRSRRSASGSRSLSPPSSRRRRRRERANNWDKPPEGLTVGQGAVTATLQGLGGLGLSGSGAGQFMDPPMLDPGVMMGTAALGAGGVVRGAIGTLTAPTAPPNQQELFNGVMVPTMMLRQAKRLYVGNVPMGCDQFVLMQLFNQAMVAAGKGSATAPPIVGVQVNESKPFAFLETRTPEDAANVLLFDGITIGANQLKVRRPKDFKPLPGIVDPPTGVSLIPGHLPTSVENTENKIYLGSIPTHFNDLQVRELVSAFGNLKAFNLVKDPALGTSKGFCFFEYLDHALTDRVCAELNGFELGERKLICQRANPSPAPAAAPSMAALAGGSMHPYAALLTGSSAAAAPLGPATKVLKLSNMVVAEELRDDNEYEEIVMDIKEECGKYGQVVSLKVPRPSYKEDGSVDVSPPGVGEVFVEFADEDGATKAGNALRNRQFSGRTVVCEFVKEEDY 588 D +E E++++ + RER RH RSRS SP R DK RS S+ R +R RRS S SP RR R++ WD PP G +Q AGQ +L G AA APT P +V + M RQA+RLYVGN+P G + + + FN M AG A + P++ VQ+N+ K FAFLE R+ ++ + FDGI LK+RRP D++PLPGI + P +PG + T V ++ +K+++G +P + ND QV+EL+++FG LKAFNLVKD A SKG+ F EY+D + TD+ A LNG +LG++KLI QRA+ A S+ P L S G T+VL L NMV+ EEL DD +YEEI+ DI+EEC KYG V S+++PRP DG V PG G++FVE+ KA AL R+F+ R VV ++ + Y Sbjct: 3 DFEEFEKQLSENRQERERERHKKRSRSGSP------GRGDKHRSWSKDRGSRSREKRSRSRDRKSRDRRSSSRDHKKHSHSP---RRTRKKRTCKYWDVPPPGFEHITPMQYKAMQ----------AAGQIPTIALLATSTTTGVAA---------------APTQVP---------IVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQAPSNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQPA--FHVPGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAFCEYVDISATDQAVAGLNGMQLGDKKLIVQRASVGAKNANPTSIIETPVTLQVPGLQRLQNS-------GMPTEVLCLLNMVMPEELVDDEDYEEILEDIREECCKYGSVRSIEIPRPV---DG---VEVPGCGKIFVEYVSAADCQKAMQALTGRKFANRVVVTKYYDPDMY 461
BLAST of EWM21646.1 vs. NCBI_GenBank
Match: gi|657576499|ref|XP_008292034.1| (PREDICTED: splicing factor U2AF 65 kDa subunit-like [Stegastes partitus] >gi|734638238|ref|XP_010747846.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Larimichthys crocea]) HSP 1 Score: 283.878 bits (725), Expect = 1.073e-85 Identity = 194/517 (37.52%), Postives = 265/517 (51.26%), Query Frame = 0 Query: 72 DRDEDEEEVASKEKRRERRRHSSRSRSRSPRGGSRGSRRDKRRSRSRSESPRGDRRRRSRDREGKSSRRSRRSASGSRSLSPPSSRRRRRRERANNWDKPPEGLTVGQGAVTATLQGLGGLGLSGSGAGQFMDPPMLDPGVMMGTAALGAGGVVRGAIGTLTAPTAPPNQQELFNGVMVPTMMLRQAKRLYVGNVPMGCDQFVLMQLFNQAMVAAGKGSATAPPIVGVQVNESKPFAFLETRTPEDAANVLLFDGITIGANQLKVRRPKDFKPLPGIVDPPTGVSLIPGHLPTSVENTENKIYLGSIPTHFNDLQVRELVSAFGNLKAFNLVKDPALGTSKGFCFFEYLDHALTDRVCAELNGFELGERKLICQRANPSPAPAAAPSMAALAGGSMHPYAALLTGSSAAAAPLGPATKVLKLSNMVVAEELRDDNEYEEIVMDIKEECGKYGQVVSLKVPRPSYKEDGSVDVSPPGVGEVFVEFADEDGATKAGNALRNRQFSGRTVVCEFVKEEDY 588 D +E E++++ + RER RH RSRS SP R DK RS S+ R +R RRS S SP RR R++ WD PP G +Q AGQ +L G AA APT P +V + M RQA+RLYVGN+P G + + + FN M AG A + P++ VQ+N+ K FAFLE R+ ++ + FDGI LK+RRP D++PLPGI + P +PG + T V ++ +K+++G +P + ND QV+EL+++FG LKAFNLVKD A SKG+ F EY+D + TD+ A LNG +LG++KLI QRA+ A S+ P L S G T+VL L NMV+ EEL DD +YEEI+ DI+EEC KYG V S+++PRP DG V PG G++FVE+ KA AL R+F+ R VV ++ + Y Sbjct: 3 DFEEFEKQLSENRQERERERHKKRSRSGSP------GRGDKHRSWSKDRGSRSREKRSRSRDRKSRDRRSSSRDHKKHSHSP---RRTRKKRTCKYWDVPPPGFEHITPMQYKAMQ----------AAGQIPTIALLATSTTTGVAA---------------APTQVP---------IVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQAPSNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQPA--FHVPGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAFCEYVDVSATDQAVAGLNGMQLGDKKLIVQRASVGAKNANPTSIIETPVTLQVPGLQRLQNS-------GMPTEVLCLLNMVMPEELVDDEDYEEILEDIREECCKYGSVRSIEIPRPV---DG---VEVPGCGKIFVEYVSAADCQKAMQALTGRKFANRVVVTKYYDPDMY 461
BLAST of EWM21646.1 vs. NCBI_GenBank
Match: gi|348510219|ref|XP_003442643.1| (PREDICTED: splicing factor U2AF 65 kDa subunit [Oreochromis niloticus] >gi|499007204|ref|XP_004556417.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Maylandia zebra] >gi|548407752|ref|XP_005740017.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Pundamilia nyererei] >gi|554827283|ref|XP_005924249.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Haplochromis burtoni] >gi|584014487|ref|XP_006802021.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Neolamprologus brichardi]) HSP 1 Score: 283.878 bits (725), Expect = 1.096e-85 Identity = 194/517 (37.52%), Postives = 265/517 (51.26%), Query Frame = 0 Query: 72 DRDEDEEEVASKEKRRERRRHSSRSRSRSPRGGSRGSRRDKRRSRSRSESPRGDRRRRSRDREGKSSRRSRRSASGSRSLSPPSSRRRRRRERANNWDKPPEGLTVGQGAVTATLQGLGGLGLSGSGAGQFMDPPMLDPGVMMGTAALGAGGVVRGAIGTLTAPTAPPNQQELFNGVMVPTMMLRQAKRLYVGNVPMGCDQFVLMQLFNQAMVAAGKGSATAPPIVGVQVNESKPFAFLETRTPEDAANVLLFDGITIGANQLKVRRPKDFKPLPGIVDPPTGVSLIPGHLPTSVENTENKIYLGSIPTHFNDLQVRELVSAFGNLKAFNLVKDPALGTSKGFCFFEYLDHALTDRVCAELNGFELGERKLICQRANPSPAPAAAPSMAALAGGSMHPYAALLTGSSAAAAPLGPATKVLKLSNMVVAEELRDDNEYEEIVMDIKEECGKYGQVVSLKVPRPSYKEDGSVDVSPPGVGEVFVEFADEDGATKAGNALRNRQFSGRTVVCEFVKEEDY 588 D +E E++++ + RER RH RSRS SP R DK RS S+ R +R RRS S SP RR R++ WD PP G +Q AGQ +L G AA APT P +V + M RQA+RLYVGN+P G + + + FN M AG A + P++ VQ+N+ K FAFLE R+ ++ + FDGI LK+RRP D++PLPGI + P +PG + T V ++ +K+++G +P + ND QV+EL+++FG LKAFNLVKD A SKG+ F EY+D + TD+ A LNG +LG++KLI QRA+ A S+ P L S G T+VL L NMV+ EEL DD +YEEI+ DI+EEC KYG V S+++PRP DG V PG G++FVE+ KA AL R+F+ R VV ++ + Y Sbjct: 3 DFEEFEKQLSENRQERERERHKKRSRSGSP------GRGDKHRSWSKDRGSRSREKRSRSRDRKSRDRRSSSRDHKKHSHSP---RRTRKKRTCKYWDVPPPGFEHITPMQYKAMQ----------AAGQIPTIALLATSTTTGVAA---------------APTQVP---------IVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQAPSNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQPA--FHVPGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAFCEYVDISATDQAVAGLNGMQLGDKKLIVQRASVGAKNANPTSIIETPVTLQVPGLQRLQNS-------GMPTEVLCLLNMVMPEELVDDEDYEEILEDIREECCKYGTVRSIEIPRPV---DG---VEVPGCGKIFVEYVSAADCQKAMQALTGRKFANRVVVTKYYDPDMY 461
BLAST of EWM21646.1 vs. NCBI_GenBank
Match: gi|1143390713|ref|XP_019949765.1| (PREDICTED: splicing factor U2AF 65 kDa subunit-like [Paralichthys olivaceus]) HSP 1 Score: 283.108 bits (723), Expect = 1.906e-85 Identity = 190/502 (37.85%), Postives = 256/502 (51.00%), Query Frame = 0 Query: 87 RERRRHSSRSRSRSPRGGSRGSRRDKRRSRSRSESPRGDRRRRSRDREGKSSRRSRRSASGSRSLSPPSSRRRRRRERANNWDKPPEGLTVGQGAVTATLQGLGGLGLSGSGAGQFMDPPMLDPGVMMGTAALGAGGVVRGAIGTLTAPTAPPNQQELFNGVMVPTMMLRQAKRLYVGNVPMGCDQFVLMQLFNQAMVAAGKGSATAPPIVGVQVNESKPFAFLETRTPEDAANVLLFDGITIGANQLKVRRPKDFKPLPGIVDPPTGVSLIPGHLPTSVENTENKIYLGSIPTHFNDLQVRELVSAFGNLKAFNLVKDPALGTSKGFCFFEYLDHALTDRVCAELNGFELGERKLICQRANPSPAPAAAPSMAALAGGSMHPYAALLTGSSAAAAPLGPATKVLKLSNMVVAEELRDDNEYEEIVMDIKEECGKYGQVVSLKVPRPSYKEDGSVDVSPPGVGEVFVEFADEDGATKAGNALRNRQFSGRTVVCEFVKEEDY 588 RER RH RSRS S R DK RS S+ R +R RRS S SP RR R+++ WD PP G +Q AGQ +L G AA APT P +V + M RQA+RLYVGN+P G + + + FN M AG A + P++ VQ+N+ K FAFLE R+ ++ + FDGI LK+RRP D++PLPGI + P +PG + T V ++ +K+++G +P + ND QV+EL+++FG LKAFNLVKD A SKG+ F EY+D + TD+ A LNG +LG++KLI QRA+ A S+ P L S G T+VL L NMV+ EEL DD +YEEI+ DI+EEC KYG V S+++PRP DG V PG G++FVE+ KA AL R+F+ R VV ++ + Y Sbjct: 15 RERERHKKRSRSGS------VVRVDKHRSWSKDRGSRSREKRSRSRDRKSRDRRSLSRDHKKHSHSP---RRTRKKKTCKYWDVPPPGFEHITPMQYKAMQ----------AAGQIPTIALLATSTTTGVAA---------------APTQVP---------IVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQAPSNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQPA--FHVPGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAFCEYVDISATDQAVAGLNGMQLGDKKLIVQRASVGAKNANPTSIIETPVTLQVPGLQRLQNS-------GMPTEVLCLLNMVMPEELVDDEDYEEILEDIREECCKYGSVRSIEIPRPV---DG---VEVPGCGKIFVEYICAADCQKAMQALTGRKFANRVVVTKYYDPDMY 458
BLAST of EWM21646.1 vs. NCBI_GenBank
Match: gi|1168916946|ref|XP_020501406.1| (splicing factor U2AF 65 kDa subunit-like isoform X3 [Labrus bergylta]) HSP 1 Score: 283.108 bits (723), Expect = 2.166e-85 Identity = 196/517 (37.91%), Postives = 266/517 (51.45%), Query Frame = 0 Query: 72 DRDEDEEEVASKEKRRERRRHSSRSRSRSPRGGSRGSRRDKRRSRSRSESPRGDRRRRSRDREGKSSRRSRRSASGSRSLSPPSSRRRRRRERANNWDKPPEGLTVGQGAVTATLQGLGGLGLSGSGAGQFMDPPMLDPGVMMGTAALGAGGVVRGAIGTLTAPTAPPNQQELFNGVMVPTMMLRQAKRLYVGNVPMGCDQFVLMQLFNQAMVAAGKGSATAPPIVGVQVNESKPFAFLETRTPEDAANVLLFDGITIGANQLKVRRPKDFKPLPGIVDPPTGVSLIPGHLPTSVENTENKIYLGSIPTHFNDLQVRELVSAFGNLKAFNLVKDPALGTSKGFCFFEYLDHALTDRVCAELNGFELGERKLICQRANPSPAPAAAPSMAALAGGSMHPYAALLTGSSAAAAPLGPATKVLKLSNMVVAEELRDDNEYEEIVMDIKEECGKYGQVVSLKVPRPSYKEDGSVDVSPPGVGEVFVEFADEDGATKAGNALRNRQFSGRTVVCEFVKEEDY 588 D +E E++++ + RER RH RSRS SP R DK RS S+ R +R RRS S SP RR R++ WD PP G +Q AGQ + T AL A A G APT P +V + M RQA+RLYVGN+P G + + + FN M AG A + P++ VQ+N+ K FAFLE R+ ++ + FDGI LK+RRP D++PLPGI + P +PG + T V ++ +K+++G +P + ND QV+EL+ +FG LKAFNLVKD A SKG+ F EY+D TD+ A LNG +LG++KLI QRA+ A S+ P +L S G T+VL L NMV+ EEL +D +YEEI+ DIKEEC KYG V S+++PRP DG V PG G++FVE+ KA AL R+F+ R VV ++ + Y Sbjct: 3 DFEEFEKQLSENRQERERERHKKRSRSGSP------GRGDKHRSWSKERGSRSREKRSRSRERKSRDRRSSSRDHKKHSHSP---RRTRKKRTCKYWDVPPPGFEHITPLQYKAMQ----------AAGQ------------IPTIALLATST---ATGLSAAPTQVP---------IVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQAPSNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQPA--FHVPGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLMSFGPLKAFNLVKDSATSLSKGYAFCEYVDVCATDQAVAGLNGMQLGDKKLIVQRASVGAKNANPTSIIETPVTLQVPGLQMLQNS-------GMPTEVLCLLNMVMPEELVEDEDYEEILEDIKEECCKYGSVRSIEIPRPV---DG---VEVPGCGKIFVEYVSAADCQKAMQALTGRKFANRVVVTKYYDPDMY 461 The following BLAST results are available for this feature:
BLAST of EWM21646.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|