EWM21594.1, cds9066 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21594.1 vs. NCBI_GenBank
Match: gi|585101849|gb|EWM21594.1| (hypothetical protein Naga_100012g47 [Nannochloropsis gaditana]) HSP 1 Score: 1328.92 bits (3438), Expect = 0.000e+0 Identity = 653/653 (100.00%), Postives = 653/653 (100.00%), Query Frame = 0
Query: 1 MPCLRSVVGRHARACFVVFSLAAMHSFARQGLLQPEDTTLPAPDSSTDAPPGAKYSLLSFPRAAQWADPQQKCTIVELHNRKGCLFEEKASLPADMDVVIPTPSSSGSKTNTSGSPFDVPASRSGEQAPWLGQRAPFGPPQSRTWRGRRLTVSEAVELQPLLDARPLGYNGADVAASLPAPPMAGDKGQPHTLWLLGDTFLGRMEGRRRIPGYFVHNSVATMPVWNHPSREADPAQVVFWHGLSPPAPFAATAEEEKDGCPASLFRTPGERVRGDENECHEGGEYLWPVSGLAVDLAAAPSNASASRSFASHLLLLATRWAYLPWIEEDVNMTRSVLNFQVLGTTLVVVDDAHLEPPRWRYRTRDWPGTGPDVNWFQAIALAGEEEGGREGGKQGGLARSENELVFLMGTAPEDSAVAEKGGGKGSTRQILGRVPVKGLLDMTLEGMEVWGRGKAAPAKARAAAQVGATGAKAGDKAGLGRVFLPPAASGAIPSALTGNDGSRSDASEGWGTLSSYMDGSWVATSLLSPVYTGVSLQYSSFLRRWYSVAIDWLGKQALLQTAESITGPWDSTPIYDLPPPFNDSNLMAYTGKAHPELADNENEIVFTYVANTPGVVYPLFEDGADILYVPRFVRIVFDGKEGGKENIRAHRKK 653
MPCLRSVVGRHARACFVVFSLAAMHSFARQGLLQPEDTTLPAPDSSTDAPPGAKYSLLSFPRAAQWADPQQKCTIVELHNRKGCLFEEKASLPADMDVVIPTPSSSGSKTNTSGSPFDVPASRSGEQAPWLGQRAPFGPPQSRTWRGRRLTVSEAVELQPLLDARPLGYNGADVAASLPAPPMAGDKGQPHTLWLLGDTFLGRMEGRRRIPGYFVHNSVATMPVWNHPSREADPAQVVFWHGLSPPAPFAATAEEEKDGCPASLFRTPGERVRGDENECHEGGEYLWPVSGLAVDLAAAPSNASASRSFASHLLLLATRWAYLPWIEEDVNMTRSVLNFQVLGTTLVVVDDAHLEPPRWRYRTRDWPGTGPDVNWFQAIALAGEEEGGREGGKQGGLARSENELVFLMGTAPEDSAVAEKGGGKGSTRQILGRVPVKGLLDMTLEGMEVWGRGKAAPAKARAAAQVGATGAKAGDKAGLGRVFLPPAASGAIPSALTGNDGSRSDASEGWGTLSSYMDGSWVATSLLSPVYTGVSLQYSSFLRRWYSVAIDWLGKQALLQTAESITGPWDSTPIYDLPPPFNDSNLMAYTGKAHPELADNENEIVFTYVANTPGVVYPLFEDGADILYVPRFVRIVFDGKEGGKENIRAHRKK
Sbjct: 1 MPCLRSVVGRHARACFVVFSLAAMHSFARQGLLQPEDTTLPAPDSSTDAPPGAKYSLLSFPRAAQWADPQQKCTIVELHNRKGCLFEEKASLPADMDVVIPTPSSSGSKTNTSGSPFDVPASRSGEQAPWLGQRAPFGPPQSRTWRGRRLTVSEAVELQPLLDARPLGYNGADVAASLPAPPMAGDKGQPHTLWLLGDTFLGRMEGRRRIPGYFVHNSVATMPVWNHPSREADPAQVVFWHGLSPPAPFAATAEEEKDGCPASLFRTPGERVRGDENECHEGGEYLWPVSGLAVDLAAAPSNASASRSFASHLLLLATRWAYLPWIEEDVNMTRSVLNFQVLGTTLVVVDDAHLEPPRWRYRTRDWPGTGPDVNWFQAIALAGEEEGGREGGKQGGLARSENELVFLMGTAPEDSAVAEKGGGKGSTRQILGRVPVKGLLDMTLEGMEVWGRGKAAPAKARAAAQVGATGAKAGDKAGLGRVFLPPAASGAIPSALTGNDGSRSDASEGWGTLSSYMDGSWVATSLLSPVYTGVSLQYSSFLRRWYSVAIDWLGKQALLQTAESITGPWDSTPIYDLPPPFNDSNLMAYTGKAHPELADNENEIVFTYVANTPGVVYPLFEDGADILYVPRFVRIVFDGKEGGKENIRAHRKK 653
BLAST of EWM21594.1 vs. NCBI_GenBank
Match: gi|585107767|gb|EWM25898.1| (hypothetical protein Naga_100048g28 [Nannochloropsis gaditana]) HSP 1 Score: 251.906 bits (642), Expect = 2.337e-68 Identity = 174/557 (31.24%), Postives = 256/557 (45.96%), Query Frame = 0
Query: 144 TWRGRRLTVSEAVELQPLLDARPLGYNGADVAASLPAPP-------------------------------MAGDKGQPHT---LWLLGDTFLGRMEGRRRIPG-YFVHNSVATMPVWNHPSREADP---AQVVFWHGLSPPAPFAATAEEEKDGCPASLFRTPGERVRG--DENECHEGGEYLWPVSGLAV--------------------DLAAAPSNASASRSFASHLLLLATRWAYLPWIEEDVNM-TRSVLNFQVLGTTLVVVDDAHLEPPRWRYRTRDWPGTGPDVNWFQAIALAGEEEGGREGGKQGGLARSENELVFLMGTAPEDSAVAEKGGGKGSTRQILGRVPVKGLLDMTLEGMEVWGRGKAAPAKARAAAQVGATGAKAGDKAGLGRVFLPPAASGAIPSALTGNDGSRSDASEGWGTLSSYMDGSWVATSLLSPVYTGVSLQYSSFLRRWYSVAIDWLGKQALLQTAESITGPWDSTPIYDLPPPFNDSNL-MAYTGKAHPELADNENEIVFTYVANTPGVVYPLFEDGADILYVPRFVRIVFD 638
+WRG + +EA +LQPL R G+ GADVA S PP GD G+ +WL GDT LG RR+ G +F+HNSVA +PV N A P VVF +S K GCP S+F VRG ++EC +YLWP+SG+ V D + +++A S +++LA RWAY+ V++ + NF +LGTT++VVD+ H P +W YR RD PGT ++NW+ A+ G K LA ++++L G ++ A + + L R+PV+ L+D++ MEVW K +P +KA A T D ++ + W ++ A L+ PV++ S++YS L +Y V +DWL +L AE +T W+ +Y +PPPFND + M Y GKAHPEL+ E+E++ T++ N PG + PLFE GA +YVPRF+R+ +
Sbjct: 545 SWRGIEIIATEAEDLQPLFSVRNAGWLGADVATSFRFPPRHPTGLRTSGVATSTSDATQGPGDGRTEGPKKEGDVGEAEHGKYMWLFGDTLLGYANEDRRLSGAFFLHNSVAFLPVINVSDPRAKPLGPEDVVFAWNVS------------KGGCPVSIF------VRGPPQDDECVHTQDYLWPISGIGVSYLEPRAEKKGNVNGKRGRGDSGSEFDSSTAEGDVVSKVIVLAVRWAYVKSHTASVDLFDDNAFNFNILGTTVLVVDNPHAHPTQWEYRQRDLPGTDANLNWYSAMM---------HGDKDAELATGPEDMIYLFGV---NNTEAVGTPPQQWQYETLSRLPVRSLVDLSFRDMEVWALTKGSP----------------DEKA----------------QATTDTDTRLTNTT--WAPYPLFLHRHLKAAPLVFPVFSETSVRYSHSLGAYYGVVVDWLSSNVVLYLAEDLTEAWEPVVVYKIPPPFNDPAVYMTYAGKAHPELS-REDELILTFMTNAPGDLEPLFETGAKDVYVPRFLRLKLE 1036
BLAST of EWM21594.1 vs. NCBI_GenBank
Match: gi|585111791|gb|EWM29268.1| (glycolipid 2-alpha-mannosyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 187.193 bits (474), Expect = 3.579e-46 Identity = 179/651 (27.50%), Postives = 265/651 (40.71%), Query Frame = 0
Query: 21 LAAMHSFARQGLLQPEDTTLPAPDSSTDAPPGAKYSLLSFPRAAQWADPQQKCTIVELHNRKGCLFE---EKASLPADMDVVIPTPS-SSGSKTNTSGSPFDVPASRSGEQAPWLGQRAPFGPPQSRTWRGRRLTVSEAVELQPLLDARPLGYNGADVAASLPAPPMAGDKGQPHTLWLLGDTFLGRMEGRRRIPGYF-VHNSVATMPV---WNHPSREADPAQVVFWHGL----SPPAPFAATAEEEKDGCPASLFRTPGERVRGDENECHEGGEYLWPVSGLAVDLAAAPSNASASRSFASHLLLLATRWAYLPWIEEDVNMTRSV-----LNFQVLGTTLVVVDDAHLEPPRWRYRTRDWPGTGPDVNWFQAIALAGEEEGGREGGKQGGLARSENELVFLMGTAPEDSAVAEKGGG---KGSTRQILGRVPVKGLLDMTLEGMEVWGRGKAAPAKARAAAQVGATGAKAGDKAGLGRVFLPPAASGAIPSALTGNDGSRSDASEGW-GTLSSYMDGSWVATSLLSPVYTGVSLQYSSFLRRWYSVAIDWLGKQALLQTAESITGPWDSTPIYDLPPPFNDSNLM-AYTGKAHPELADN-----ENEIVFTYVANTPGVVYPLFEDGADILYVPRFVRIVFDGKEGGK 644
L A +ARQ + P L PD+ Y +A W PQ L G ++ E L + + +P S+ +PF +S RA P R WR R ++V A EL LL R GY G+DVA S P +AG +WLLGDT+LG +G +R + + N+VA P P+ V F+ G SP APF A A + G LWPVSG++V+ ++L A R +++ N+T + +NF+V GT+L+V+++ P RWRY D GT NWF A+A+AG +E +A S ++++L+G V +G G +++ +LGR+ V LL + MEV ++ SD E W T + + ++SP SLQY+S L W S+A+D + Q +L +A S++GPW S I+ +P P++D +L Y GK HPELA + E VF+YV N P LF++G LY P+F+R+ E G+
Sbjct: 794 LEATTGYARQEDVTPTFLELLTPDA-------VFYDGFIISHSAFWRSPQYLSFFDYLDLEGGMFYQRWTEANILTQALALFVPVEELHRFSEVGFEHTPFVKQSS----------NRAILKKPVDRVWRDRDISVEPAPELSGLLAPRRFGYLGSDVATSFRLPSVAGHGSY---MWLLGDTYLGTSDGLKRQGMHTTISNAVAFFPSGADLGAAGELLTPSDVTFFWGYDLDGSPTAPFEAEAGQA-------------------------AGTVLWPVSGVSVEYQGVVK-----------IVLFAQR------VQKTHNLTDFLGVADGMNFEVEGTSLIVIENPAAAPNRWRYSVTDIAGTNGTHNWFSAVAVAGGKE----------IADSPEDVLYLVGN------VGARGLGVYDDEASKNVLGRIKVTDLLKRRFDRMEVL--------------------------------------------VEEAHESRESDGKELWMSTAEAEASVARRRKGIISPANAETSLQYNSELGAWVSLAVDSVSAQLVLWSARSVSGPWTSAVIHSIPAPYDDLSLYRCYAGKGHPELAREGLPGGDVEFVFSYVCNAPSDSGILFDEGQLTLYAPQFIRVRLGPAEDGR 1322
BLAST of EWM21594.1 vs. NCBI_GenBank
Match: gi|922860669|gb|KOO28529.1| (hypothetical protein Ctob_011265 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 69.707 bits (169), Expect = 2.084e-9 Identity = 36/91 (39.56%), Postives = 48/91 (52.75%), Query Frame = 0
Query: 545 WYSVAIDWLGKQALLQTAESITGPWDSTPIYDLPPPFNDSNLMAYTGKAHPELADNENEIVFTYVANTPGVVYPLFEDGADILYVPRFVRI 635
+Y V + ++ +A S+TGPW Y LPP AY KAHPELA E+E+V +Y N G + DG +YVPRFVR+
Sbjct: 149 YYVVCLQAGDPNIIIHSAASLTGPWGGAIAYTLPPDLARYQQFAYAAKAHPELAQAEDELVISYNVNCVGEGFTCL-DGNLSIYVPRFVRL 238
BLAST of EWM21594.1 vs. NCBI_GenBank
Match: gi|553195779|ref|XP_005856206.1| (alpha 1,2-mannosyltransferase [Nannochloropsis gaditana CCMP526] >gi|422292854|gb|EKU20156.1| alpha 1,2-mannosyltransferase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 67.0106 bits (162), Expect = 1.067e-7 Identity = 118/487 (24.23%), Postives = 179/487 (36.76%), Query Frame = 0
Query: 120 PASRSGEQAPWLGQRAPFGPPQSRTWR--GRRLTVSE-AVELQPLLDARPLGYNGADVAASLPAPPM-----AGDKGQPHT----LWLLGDTFLGRMEGRRRIPGYFVHNSVATMPVWNHPSREADPAQVVFW-HGLSPPAPFAATAEEEKDGCPASLFRTPGERVRGDENECHEGGEYLWPVSGLAVDLAAAPSNASASRSFASHLLLLATRWAYLPWIEEDVNMTRSVLNFQ--VLGTTLVVVDDAHLEPPRWRYRTRDWPGTGPDVNWFQAIALAGEEEGGREGGKQGGLARSENELVFLMGTAPEDSAVAEKGGGKGSTRQILGRVPVKGLLDMTLEGMEVWGRGKAAPAKARAAAQVGATGAKAGDKAGLGRVFLP---------PAASGAIPSALTGNDGSRSDASEGWGTLSSYMDGSWVATSLLSPVYTGVSLQYSSFLRRWYSVAIDWLGKQALLQTAESITGPWDSTPIYDLPPPFN 582
P S PW P P Q R R+TVS+ + L L R LG+ A++ +P P A G+P T W+LG T +G + + + + ++VA + A+ FW H S AP A DG + H+ L P +GLAV P ++L R N++ +V Q LG+ + VV +AH P W Y R PGT W A+ L R R + V+++G + + + ++G++PV LL M++E ME + G+A +R T G A FLP P+ PSA G + + S G G L W ++ P RR LGK+ +L+TAE++TGPW+ + +LP ++
Sbjct: 973 PVDLSASLLPW--SEPPSHPTQESHIRVGEHRVTVSQDSHSLTALFRPRHLGFLDAELGPPVPIPRHVSSSDATRSGEPDTDLDIAWILGKTRIGHLNNTKPEAAFELDDAVAMLSA-------AEGDADFFWRHTGSQRAPNAIF----NDGTLGT----------------HQA---LVPSAGLAVVPEDHPDEVRL-------VVLCQIR-----------NVSGNVYEGQRTQLGSAIAVVSNAHQRPELWEYDMRRIPGTHTWSGWHTALTLVDGSSVSR---------RPSTDYVYILGERAAN--ITTQDSSYIKREHLVGKLPVSSLLAMSMEAMEFF-VGRAPGDTSRE------TNGSKGQWASFAEHFLPAHGQVEAGMPSVEALFPSA-DGKATALAAESVGMGYLPG--PNLWFVGDIVPPAQG----------RRG-------LGKRLVLKTAEAVTGPWEDHSVVELPLDYS 1371
BLAST of EWM21594.1 vs. NCBI_GenBank
Match: gi|585113133|gb|EWM30469.1| (kre2p [Nannochloropsis gaditana]) HSP 1 Score: 65.855 bits (159), Expect = 2.096e-7 Identity = 117/487 (24.02%), Postives = 178/487 (36.55%), Query Frame = 0
Query: 120 PASRSGEQAPWLGQRAPFGPPQSRTWR--GRRLTVSE-AVELQPLLDARPLGYNGADVAASLPAPPM-----AGDKGQPHT----LWLLGDTFLGRMEGRRRIPGYFVHNSVATMPVWNHPSREADPAQVVFW-HGLSPPAPFAATAEEEKDGCPASLFRTPGERVRGDENECHEGGEYLWPVSGLAVDLAAAPSNASASRSFASHLLLLATRWAYLPWIEEDVNMTRSVLNFQ--VLGTTLVVVDDAHLEPPRWRYRTRDWPGTGPDVNWFQAIALAGEEEGGREGGKQGGLARSENELVFLMGTAPEDSAVAEKGGGKGSTRQILGRVPVKGLLDMTLEGMEVWGRGKAAPAKARAAAQVGATGAKAGDKAGLGRVFLP---------PAASGAIPSALTGNDGSRSDASEGWGTLSSYMDGSWVATSLLSPVYTGVSLQYSSFLRRWYSVAIDWLGKQALLQTAESITGPWDSTPIYDLPPPFN 582
P S PW P P Q R R+TVS+ + L L R LG+ A++ +P P A G+P T W+LG T +G + + + + ++VA + A+ FW H S AP A DG + H+ L P +GLAV P ++L R N++ +V Q LG+ + VV +AH P W Y R PGT W A+ L R R + V+++G + + K ++G++PV LL M++E ME + G+A +R T G A FLP P+ PSA G + + S G G L W ++ P + LGK+ +L+TAE++TGPW+ + +LP ++
Sbjct: 973 PVDLSASLLPW--SEPPSHPTQESHIRVGEHRVTVSQDSHSLTALFRPRHLGFLDAELGPPVPIPRHVSSSDATRSGEPDTDLDIAWILGKTRIGHLNNTKPEVAFELDDAVAMLSA-------AEGDADFFWRHTGSQRAPNAIF----NDGTLGA----------------HQA---LVPTAGLAVVPEDHPDELRL-------VVLCQIR-----------NVSGNVYEGQRTQLGSAIAVVSNAHQRPELWEYDMRRIPGTHTWSGWHTALTLVDGSSVSR---------RPSTDYVYILGERAANITTHDSSYIK--REHLVGKLPVSSLLAMSMEAMEFF-VGRAPGDTSRE------TNGSKGQWASFAEHFLPAHGQVEAGMPSVEALFPSA-DGKATALAAESVGMGYLPG--PNLWFVGDIVPP-----------------AQGRHGLGKRLVLKTAEAVTGPWEDHSVVELPLDYS 1371 The following BLAST results are available for this feature:
BLAST of EWM21594.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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