EWM21594.1, cds9066 (CDS) Nannochloropsis gaditana

Overview
NameEWM21594.1
Unique Namecds9066
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:321434..321556 +
Alignment locationKK037251.1:321852..323690 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21594.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100012g47.1926.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:321434..321556 +
KK037251.1supercontigKK037251.1:321852..323690 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM21594.1 vs. NCBI_GenBank
Match: gi|585101849|gb|EWM21594.1| (hypothetical protein Naga_100012g47 [Nannochloropsis gaditana])

HSP 1 Score: 1328.92 bits (3438), Expect = 0.000e+0
Identity = 653/653 (100.00%), Postives = 653/653 (100.00%), Query Frame = 0
Query:    1 MPCLRSVVGRHARACFVVFSLAAMHSFARQGLLQPEDTTLPAPDSSTDAPPGAKYSLLSFPRAAQWADPQQKCTIVELHNRKGCLFEEKASLPADMDVVIPTPSSSGSKTNTSGSPFDVPASRSGEQAPWLGQRAPFGPPQSRTWRGRRLTVSEAVELQPLLDARPLGYNGADVAASLPAPPMAGDKGQPHTLWLLGDTFLGRMEGRRRIPGYFVHNSVATMPVWNHPSREADPAQVVFWHGLSPPAPFAATAEEEKDGCPASLFRTPGERVRGDENECHEGGEYLWPVSGLAVDLAAAPSNASASRSFASHLLLLATRWAYLPWIEEDVNMTRSVLNFQVLGTTLVVVDDAHLEPPRWRYRTRDWPGTGPDVNWFQAIALAGEEEGGREGGKQGGLARSENELVFLMGTAPEDSAVAEKGGGKGSTRQILGRVPVKGLLDMTLEGMEVWGRGKAAPAKARAAAQVGATGAKAGDKAGLGRVFLPPAASGAIPSALTGNDGSRSDASEGWGTLSSYMDGSWVATSLLSPVYTGVSLQYSSFLRRWYSVAIDWLGKQALLQTAESITGPWDSTPIYDLPPPFNDSNLMAYTGKAHPELADNENEIVFTYVANTPGVVYPLFEDGADILYVPRFVRIVFDGKEGGKENIRAHRKK 653
            MPCLRSVVGRHARACFVVFSLAAMHSFARQGLLQPEDTTLPAPDSSTDAPPGAKYSLLSFPRAAQWADPQQKCTIVELHNRKGCLFEEKASLPADMDVVIPTPSSSGSKTNTSGSPFDVPASRSGEQAPWLGQRAPFGPPQSRTWRGRRLTVSEAVELQPLLDARPLGYNGADVAASLPAPPMAGDKGQPHTLWLLGDTFLGRMEGRRRIPGYFVHNSVATMPVWNHPSREADPAQVVFWHGLSPPAPFAATAEEEKDGCPASLFRTPGERVRGDENECHEGGEYLWPVSGLAVDLAAAPSNASASRSFASHLLLLATRWAYLPWIEEDVNMTRSVLNFQVLGTTLVVVDDAHLEPPRWRYRTRDWPGTGPDVNWFQAIALAGEEEGGREGGKQGGLARSENELVFLMGTAPEDSAVAEKGGGKGSTRQILGRVPVKGLLDMTLEGMEVWGRGKAAPAKARAAAQVGATGAKAGDKAGLGRVFLPPAASGAIPSALTGNDGSRSDASEGWGTLSSYMDGSWVATSLLSPVYTGVSLQYSSFLRRWYSVAIDWLGKQALLQTAESITGPWDSTPIYDLPPPFNDSNLMAYTGKAHPELADNENEIVFTYVANTPGVVYPLFEDGADILYVPRFVRIVFDGKEGGKENIRAHRKK
Sbjct:    1 MPCLRSVVGRHARACFVVFSLAAMHSFARQGLLQPEDTTLPAPDSSTDAPPGAKYSLLSFPRAAQWADPQQKCTIVELHNRKGCLFEEKASLPADMDVVIPTPSSSGSKTNTSGSPFDVPASRSGEQAPWLGQRAPFGPPQSRTWRGRRLTVSEAVELQPLLDARPLGYNGADVAASLPAPPMAGDKGQPHTLWLLGDTFLGRMEGRRRIPGYFVHNSVATMPVWNHPSREADPAQVVFWHGLSPPAPFAATAEEEKDGCPASLFRTPGERVRGDENECHEGGEYLWPVSGLAVDLAAAPSNASASRSFASHLLLLATRWAYLPWIEEDVNMTRSVLNFQVLGTTLVVVDDAHLEPPRWRYRTRDWPGTGPDVNWFQAIALAGEEEGGREGGKQGGLARSENELVFLMGTAPEDSAVAEKGGGKGSTRQILGRVPVKGLLDMTLEGMEVWGRGKAAPAKARAAAQVGATGAKAGDKAGLGRVFLPPAASGAIPSALTGNDGSRSDASEGWGTLSSYMDGSWVATSLLSPVYTGVSLQYSSFLRRWYSVAIDWLGKQALLQTAESITGPWDSTPIYDLPPPFNDSNLMAYTGKAHPELADNENEIVFTYVANTPGVVYPLFEDGADILYVPRFVRIVFDGKEGGKENIRAHRKK 653          
BLAST of EWM21594.1 vs. NCBI_GenBank
Match: gi|585107767|gb|EWM25898.1| (hypothetical protein Naga_100048g28 [Nannochloropsis gaditana])

HSP 1 Score: 251.906 bits (642), Expect = 2.337e-68
Identity = 174/557 (31.24%), Postives = 256/557 (45.96%), Query Frame = 0
Query:  144 TWRGRRLTVSEAVELQPLLDARPLGYNGADVAASLPAPP-------------------------------MAGDKGQPHT---LWLLGDTFLGRMEGRRRIPG-YFVHNSVATMPVWNHPSREADP---AQVVFWHGLSPPAPFAATAEEEKDGCPASLFRTPGERVRG--DENECHEGGEYLWPVSGLAV--------------------DLAAAPSNASASRSFASHLLLLATRWAYLPWIEEDVNM-TRSVLNFQVLGTTLVVVDDAHLEPPRWRYRTRDWPGTGPDVNWFQAIALAGEEEGGREGGKQGGLARSENELVFLMGTAPEDSAVAEKGGGKGSTRQILGRVPVKGLLDMTLEGMEVWGRGKAAPAKARAAAQVGATGAKAGDKAGLGRVFLPPAASGAIPSALTGNDGSRSDASEGWGTLSSYMDGSWVATSLLSPVYTGVSLQYSSFLRRWYSVAIDWLGKQALLQTAESITGPWDSTPIYDLPPPFNDSNL-MAYTGKAHPELADNENEIVFTYVANTPGVVYPLFEDGADILYVPRFVRIVFD 638
            +WRG  +  +EA +LQPL   R  G+ GADVA S   PP                                 GD G+      +WL GDT LG     RR+ G +F+HNSVA +PV N     A P     VVF   +S            K GCP S+F      VRG   ++EC    +YLWP+SG+ V                    D  +   +++A     S +++LA RWAY+      V++   +  NF +LGTT++VVD+ H  P +W YR RD PGT  ++NW+ A+           G K   LA    ++++L G    ++  A     +    + L R+PV+ L+D++   MEVW   K +P                 +KA                 A T  D   ++ +  W     ++     A  L+ PV++  S++YS  L  +Y V +DWL    +L  AE +T  W+   +Y +PPPFND  + M Y GKAHPEL+  E+E++ T++ N PG + PLFE GA  +YVPRF+R+  +
Sbjct:  545 SWRGIEIIATEAEDLQPLFSVRNAGWLGADVATSFRFPPRHPTGLRTSGVATSTSDATQGPGDGRTEGPKKEGDVGEAEHGKYMWLFGDTLLGYANEDRRLSGAFFLHNSVAFLPVINVSDPRAKPLGPEDVVFAWNVS------------KGGCPVSIF------VRGPPQDDECVHTQDYLWPISGIGVSYLEPRAEKKGNVNGKRGRGDSGSEFDSSTAEGDVVSKVIVLAVRWAYVKSHTASVDLFDDNAFNFNILGTTVLVVDNPHAHPTQWEYRQRDLPGTDANLNWYSAMM---------HGDKDAELATGPEDMIYLFGV---NNTEAVGTPPQQWQYETLSRLPVRSLVDLSFRDMEVWALTKGSP----------------DEKA----------------QATTDTDTRLTNTT--WAPYPLFLHRHLKAAPLVFPVFSETSVRYSHSLGAYYGVVVDWLSSNVVLYLAEDLTEAWEPVVVYKIPPPFNDPAVYMTYAGKAHPELS-REDELILTFMTNAPGDLEPLFETGAKDVYVPRFLRLKLE 1036          
BLAST of EWM21594.1 vs. NCBI_GenBank
Match: gi|585111791|gb|EWM29268.1| (glycolipid 2-alpha-mannosyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 187.193 bits (474), Expect = 3.579e-46
Identity = 179/651 (27.50%), Postives = 265/651 (40.71%), Query Frame = 0
Query:   21 LAAMHSFARQGLLQPEDTTLPAPDSSTDAPPGAKYSLLSFPRAAQWADPQQKCTIVELHNRKGCLFE---EKASLPADMDVVIPTPS-SSGSKTNTSGSPFDVPASRSGEQAPWLGQRAPFGPPQSRTWRGRRLTVSEAVELQPLLDARPLGYNGADVAASLPAPPMAGDKGQPHTLWLLGDTFLGRMEGRRRIPGYF-VHNSVATMPV---WNHPSREADPAQVVFWHGL----SPPAPFAATAEEEKDGCPASLFRTPGERVRGDENECHEGGEYLWPVSGLAVDLAAAPSNASASRSFASHLLLLATRWAYLPWIEEDVNMTRSV-----LNFQVLGTTLVVVDDAHLEPPRWRYRTRDWPGTGPDVNWFQAIALAGEEEGGREGGKQGGLARSENELVFLMGTAPEDSAVAEKGGG---KGSTRQILGRVPVKGLLDMTLEGMEVWGRGKAAPAKARAAAQVGATGAKAGDKAGLGRVFLPPAASGAIPSALTGNDGSRSDASEGW-GTLSSYMDGSWVATSLLSPVYTGVSLQYSSFLRRWYSVAIDWLGKQALLQTAESITGPWDSTPIYDLPPPFNDSNLM-AYTGKAHPELADN-----ENEIVFTYVANTPGVVYPLFEDGADILYVPRFVRIVFDGKEGGK 644
            L A   +ARQ  + P    L  PD+         Y       +A W  PQ       L    G  ++   E   L   + + +P       S+     +PF   +S           RA    P  R WR R ++V  A EL  LL  R  GY G+DVA S   P +AG       +WLLGDT+LG  +G +R   +  + N+VA  P             P+ V F+ G     SP APF A A +                           G  LWPVSG++V+                 ++L A R      +++  N+T  +     +NF+V GT+L+V+++    P RWRY   D  GT    NWF A+A+AG +E          +A S  ++++L+G       V  +G G     +++ +LGR+ V  LL    + MEV                                                 ++   SD  E W  T  +    +     ++SP     SLQY+S L  W S+A+D +  Q +L +A S++GPW S  I+ +P P++D +L   Y GK HPELA       + E VF+YV N P     LF++G   LY P+F+R+     E G+
Sbjct:  794 LEATTGYARQEDVTPTFLELLTPDA-------VFYDGFIISHSAFWRSPQYLSFFDYLDLEGGMFYQRWTEANILTQALALFVPVEELHRFSEVGFEHTPFVKQSS----------NRAILKKPVDRVWRDRDISVEPAPELSGLLAPRRFGYLGSDVATSFRLPSVAGHGSY---MWLLGDTYLGTSDGLKRQGMHTTISNAVAFFPSGADLGAAGELLTPSDVTFFWGYDLDGSPTAPFEAEAGQA-------------------------AGTVLWPVSGVSVEYQGVVK-----------IVLFAQR------VQKTHNLTDFLGVADGMNFEVEGTSLIVIENPAAAPNRWRYSVTDIAGTNGTHNWFSAVAVAGGKE----------IADSPEDVLYLVGN------VGARGLGVYDDEASKNVLGRIKVTDLLKRRFDRMEVL--------------------------------------------VEEAHESRESDGKELWMSTAEAEASVARRRKGIISPANAETSLQYNSELGAWVSLAVDSVSAQLVLWSARSVSGPWTSAVIHSIPAPYDDLSLYRCYAGKGHPELAREGLPGGDVEFVFSYVCNAPSDSGILFDEGQLTLYAPQFIRVRLGPAEDGR 1322          
BLAST of EWM21594.1 vs. NCBI_GenBank
Match: gi|922860669|gb|KOO28529.1| (hypothetical protein Ctob_011265 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 69.707 bits (169), Expect = 2.084e-9
Identity = 36/91 (39.56%), Postives = 48/91 (52.75%), Query Frame = 0
Query:  545 WYSVAIDWLGKQALLQTAESITGPWDSTPIYDLPPPFNDSNLMAYTGKAHPELADNENEIVFTYVANTPGVVYPLFEDGADILYVPRFVRI 635
            +Y V +       ++ +A S+TGPW     Y LPP        AY  KAHPELA  E+E+V +Y  N  G  +    DG   +YVPRFVR+
Sbjct:  149 YYVVCLQAGDPNIIIHSAASLTGPWGGAIAYTLPPDLARYQQFAYAAKAHPELAQAEDELVISYNVNCVGEGFTCL-DGNLSIYVPRFVRL 238          
BLAST of EWM21594.1 vs. NCBI_GenBank
Match: gi|553195779|ref|XP_005856206.1| (alpha 1,2-mannosyltransferase [Nannochloropsis gaditana CCMP526] >gi|422292854|gb|EKU20156.1| alpha 1,2-mannosyltransferase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 67.0106 bits (162), Expect = 1.067e-7
Identity = 118/487 (24.23%), Postives = 179/487 (36.76%), Query Frame = 0
Query:  120 PASRSGEQAPWLGQRAPFGPPQSRTWR--GRRLTVSE-AVELQPLLDARPLGYNGADVAASLPAPPM-----AGDKGQPHT----LWLLGDTFLGRMEGRRRIPGYFVHNSVATMPVWNHPSREADPAQVVFW-HGLSPPAPFAATAEEEKDGCPASLFRTPGERVRGDENECHEGGEYLWPVSGLAVDLAAAPSNASASRSFASHLLLLATRWAYLPWIEEDVNMTRSVLNFQ--VLGTTLVVVDDAHLEPPRWRYRTRDWPGTGPDVNWFQAIALAGEEEGGREGGKQGGLARSENELVFLMGTAPEDSAVAEKGGGKGSTRQILGRVPVKGLLDMTLEGMEVWGRGKAAPAKARAAAQVGATGAKAGDKAGLGRVFLP---------PAASGAIPSALTGNDGSRSDASEGWGTLSSYMDGSWVATSLLSPVYTGVSLQYSSFLRRWYSVAIDWLGKQALLQTAESITGPWDSTPIYDLPPPFN 582
            P   S    PW     P  P Q    R    R+TVS+ +  L  L   R LG+  A++   +P P       A   G+P T     W+LG T +G +   +    + + ++VA +         A+     FW H  S  AP A       DG   +                H+    L P +GLAV     P            ++L   R           N++ +V   Q   LG+ + VV +AH  P  W Y  R  PGT     W  A+ L       R         R   + V+++G    +  +  +         ++G++PV  LL M++E ME +  G+A    +R       T    G  A     FLP         P+     PSA  G   + +  S G G L       W    ++ P             RR        LGK+ +L+TAE++TGPW+   + +LP  ++
Sbjct:  973 PVDLSASLLPW--SEPPSHPTQESHIRVGEHRVTVSQDSHSLTALFRPRHLGFLDAELGPPVPIPRHVSSSDATRSGEPDTDLDIAWILGKTRIGHLNNTKPEAAFELDDAVAMLSA-------AEGDADFFWRHTGSQRAPNAIF----NDGTLGT----------------HQA---LVPSAGLAVVPEDHPDEVRL-------VVLCQIR-----------NVSGNVYEGQRTQLGSAIAVVSNAHQRPELWEYDMRRIPGTHTWSGWHTALTLVDGSSVSR---------RPSTDYVYILGERAAN--ITTQDSSYIKREHLVGKLPVSSLLAMSMEAMEFF-VGRAPGDTSRE------TNGSKGQWASFAEHFLPAHGQVEAGMPSVEALFPSA-DGKATALAAESVGMGYLPG--PNLWFVGDIVPPAQG----------RRG-------LGKRLVLKTAEAVTGPWEDHSVVELPLDYS 1371          
BLAST of EWM21594.1 vs. NCBI_GenBank
Match: gi|585113133|gb|EWM30469.1| (kre2p [Nannochloropsis gaditana])

HSP 1 Score: 65.855 bits (159), Expect = 2.096e-7
Identity = 117/487 (24.02%), Postives = 178/487 (36.55%), Query Frame = 0
Query:  120 PASRSGEQAPWLGQRAPFGPPQSRTWR--GRRLTVSE-AVELQPLLDARPLGYNGADVAASLPAPPM-----AGDKGQPHT----LWLLGDTFLGRMEGRRRIPGYFVHNSVATMPVWNHPSREADPAQVVFW-HGLSPPAPFAATAEEEKDGCPASLFRTPGERVRGDENECHEGGEYLWPVSGLAVDLAAAPSNASASRSFASHLLLLATRWAYLPWIEEDVNMTRSVLNFQ--VLGTTLVVVDDAHLEPPRWRYRTRDWPGTGPDVNWFQAIALAGEEEGGREGGKQGGLARSENELVFLMGTAPEDSAVAEKGGGKGSTRQILGRVPVKGLLDMTLEGMEVWGRGKAAPAKARAAAQVGATGAKAGDKAGLGRVFLP---------PAASGAIPSALTGNDGSRSDASEGWGTLSSYMDGSWVATSLLSPVYTGVSLQYSSFLRRWYSVAIDWLGKQALLQTAESITGPWDSTPIYDLPPPFN 582
            P   S    PW     P  P Q    R    R+TVS+ +  L  L   R LG+  A++   +P P       A   G+P T     W+LG T +G +   +    + + ++VA +         A+     FW H  S  AP A       DG   +                H+    L P +GLAV     P            ++L   R           N++ +V   Q   LG+ + VV +AH  P  W Y  R  PGT     W  A+ L       R         R   + V+++G    +    +    K     ++G++PV  LL M++E ME +  G+A    +R       T    G  A     FLP         P+     PSA  G   + +  S G G L       W    ++ P                 +     LGK+ +L+TAE++TGPW+   + +LP  ++
Sbjct:  973 PVDLSASLLPW--SEPPSHPTQESHIRVGEHRVTVSQDSHSLTALFRPRHLGFLDAELGPPVPIPRHVSSSDATRSGEPDTDLDIAWILGKTRIGHLNNTKPEVAFELDDAVAMLSA-------AEGDADFFWRHTGSQRAPNAIF----NDGTLGA----------------HQA---LVPTAGLAVVPEDHPDELRL-------VVLCQIR-----------NVSGNVYEGQRTQLGSAIAVVSNAHQRPELWEYDMRRIPGTHTWSGWHTALTLVDGSSVSR---------RPSTDYVYILGERAANITTHDSSYIK--REHLVGKLPVSSLLAMSMEAMEFF-VGRAPGDTSRE------TNGSKGQWASFAEHFLPAHGQVEAGMPSVEALFPSA-DGKATALAAESVGMGYLPG--PNLWFVGDIVPP-----------------AQGRHGLGKRLVLKTAEAVTGPWEDHSVVELPLDYS 1371          
The following BLAST results are available for this feature:
BLAST of EWM21594.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 6
Match NameE-valueIdentityDescription
gi|585101849|gb|EWM21594.1|0.000e+0100.00hypothetical protein Naga_100012g47 [Nannochlorops... [more]
gi|585107767|gb|EWM25898.1|2.337e-6831.24hypothetical protein Naga_100048g28 [Nannochlorops... [more]
gi|585111791|gb|EWM29268.1|3.579e-4627.50glycolipid 2-alpha-mannosyltransferase [Nannochlor... [more]
gi|922860669|gb|KOO28529.1|2.084e-939.56hypothetical protein Ctob_011265 [Chrysochromulina... [more]
gi|553195779|ref|XP_005856206.1|1.067e-724.23alpha 1,2-mannosyltransferase [Nannochloropsis gad... [more]
gi|585113133|gb|EWM30469.1|2.096e-724.02kre2p [Nannochloropsis gaditana][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9096rna9096Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications