EWM21630.1, cds9063 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21630.1 vs. NCBI_GenBank
Match: gi|585101885|gb|EWM21630.1| (Chromosome transmission fidelity protein 8 [Nannochloropsis gaditana]) HSP 1 Score: 392.119 bits (1006), Expect = 6.145e-138 Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0 Query: 1 MLIPIRLPALHGNDKNVESSTCAPSEASNTDVGNTSTSELEEWSLVELNGTLNCSGRGKPASTEEGLGGLPLGDLSFPALNKPVLVIGAHKLEGEIVRLNKPFLVMRKRKLSREGVTPEKRRTSGASQQTAADTTPSERSSAGSPEGLGDEGQLIRDDERGEDTAYDVVGVVRQKLLFKERPKPLVSRHLVQRGL 195 MLIPIRLPALHGNDKNVESSTCAPSEASNTDVGNTSTSELEEWSLVELNGTLNCSGRGKPASTEEGLGGLPLGDLSFPALNKPVLVIGAHKLEGEIVRLNKPFLVMRKRKLSREGVTPEKRRTSGASQQTAADTTPSERSSAGSPEGLGDEGQLIRDDERGEDTAYDVVGVVRQKLLFKERPKPLVSRHLVQRGL Sbjct: 1 MLIPIRLPALHGNDKNVESSTCAPSEASNTDVGNTSTSELEEWSLVELNGTLNCSGRGKPASTEEGLGGLPLGDLSFPALNKPVLVIGAHKLEGEIVRLNKPFLVMRKRKLSREGVTPEKRRTSGASQQTAADTTPSERSSAGSPEGLGDEGQLIRDDERGEDTAYDVVGVVRQKLLFKERPKPLVSRHLVQRGL 195
BLAST of EWM21630.1 vs. NCBI_GenBank
Match: gi|1140331594|ref|XP_019933318.1| (PREDICTED: chromosome transmission fidelity protein 8 homolog isoform X3 [Aedes albopictus]) HSP 1 Score: 78.5666 bits (192), Expect = 5.823e-15 Identity = 49/162 (30.25%), Postives = 79/162 (48.77%), Query Frame = 0 Query: 37 TSELEEWSLVELNGTLNCSGRGKPASTEEGLGGLPLGDLSFPALNKPVLVIGAHKLEGEIVRLNKPFLVM-----RKRKLSREGVT------PEKRRTSGASQQTAADTTPSERSSAGSPEGLGDEGQLIRDDERGEDTAYDVVGVVRQKLLFKERPKPLVS 187 T +++EW +VEL G L G + + G +GDL + +P+L+IG H L+G + +++KP LVM RKR+++ PE SQ + D+T + + L E + + T Y V VV+ K+LFK RPKP+++ Sbjct: 11 TGDIDEWCIVELQGDLEVRG-------DRIMDGQFIGDLLYNKYGQPILIIGHHILQGRLQKMDKPLLVMEKCETRKRRITEPAANNEPEDDPENETMLDVSQVSHLDSTIASSNRTVLDSTLAVEHKTV------PKTEYQVRAVVKHKILFKARPKPIIA 159
BLAST of EWM21630.1 vs. NCBI_GenBank
Match: gi|157134196|ref|XP_001663183.1| (AAEL012992-PA [Aedes aegypti] >gi|108870578|gb|EAT34803.1| AAEL012992-PA [Aedes aegypti]) HSP 1 Score: 77.7962 bits (190), Expect = 1.092e-14 Identity = 46/151 (30.46%), Postives = 75/151 (49.67%), Query Frame = 0 Query: 39 ELEEWSLVELNGTLNCSGRGKPASTEEGLGGLPLGDLSFPALNKPVLVIGAHKLEGEIVRLNKPFLVMRKRKLSREGVTPEKRRTSGASQQTAADTTPSER--SSAGSPEGLGDEGQLIRDDERGEDTAYDVVGVVRQKLLFKERPKPLVS 187 ++EEW +VEL G L G + + G +GDL + +P+L+IG H L+G + +++KP LVM K + + +T A +T D + S+ S + L + + T Y V VV+ K+LFK RPKP+++ Sbjct: 22 DIEEWCIVELQGDLEVRG-------DRLMDGQFIGDLLYNKYGQPILIIGHHILQGRLQKVDKPLLVMEKCETRKRHITEPSNEEDDAENETMLDVSQISHLDSTLASSNRTVLDSTLAVEHKTVPKTEYLVRAVVKHKILFKARPKPIIA 165
BLAST of EWM21630.1 vs. NCBI_GenBank
Match: gi|1121167181|ref|XP_019529178.1| (PREDICTED: chromosome transmission fidelity protein 8 homolog [Aedes albopictus]) HSP 1 Score: 76.6406 bits (187), Expect = 3.023e-14 Identity = 48/163 (29.45%), Postives = 77/163 (47.24%), Query Frame = 0 Query: 37 TSELEEWSLVELNGTLNCSGRGKPASTEEGLGGLPLGDLSFPALNKPVLVIGAHKLEGEIVRLNKPFLVMRKRKLSREGVT------------PEKRRTSGASQQTAADTTPSERSSAGSPEGLGDEGQLIRDDERGEDTAYDVVGVVRQKLLFKERPKPLVS 187 T ++EW +VEL G L G + + G +GDL + +P+L+IG H L+G + +++KP LVM K + + +T PE SQ + D+T + + L E + + T Y V VV+ K+LFK RPKP+++ Sbjct: 11 TGNIDEWCIVELQGDLEVRG-------DRIMDGQFIGDLLYNKYGQPILIIGHHILQGRLQKMDKPLLVMEKCETRKRRITEPAPNNTEGDDEPENETMLDVSQVSHLDSTIASSNRTVLDSTLAVEHKTV------PKTEYQVRAVVKHKILFKARPKPIIA 160
BLAST of EWM21630.1 vs. NCBI_GenBank
Match: gi|157134998|ref|XP_001663395.1| (AAEL013202-PA [Aedes aegypti] >gi|108870344|gb|EAT34569.1| AAEL013202-PA [Aedes aegypti]) HSP 1 Score: 76.2554 bits (186), Expect = 4.169e-14 Identity = 46/153 (30.07%), Postives = 75/153 (49.02%), Query Frame = 0 Query: 37 TSELEEWSLVELNGTLNCSGRGKPASTEEGLGGLPLGDLSFPALNKPVLVIGAHKLEGEIVRLNKPFLVMRKRKLSREGVTPEKRRTSGASQQTAADTTPSER--SSAGSPEGLGDEGQLIRDDERGEDTAYDVVGVVRQKLLFKERPKPLVS 187 T ++EEW +VEL G L G + + G +GDL + +P+L+IG H L+G + +++KP LVM K + + +T +T D + S+ S + L + + T Y V VV+ K+LFK RPKP+++ Sbjct: 10 TGDIEEWCIVELQGDLEVRG-------DRLMDGQFIGDLLYNKYGQPILIIGHHILQGRLQKVDKPLLVMEKCETRKRHITEPSNEEDDEENETMLDVSQVSHLDSTLASSNRTVLDSTLAVEHKTVPKTEYLVRAVVKHKILFKARPKPIIA 155
BLAST of EWM21630.1 vs. NCBI_GenBank
Match: gi|1140331588|ref|XP_019933317.1| (PREDICTED: uncharacterized protein LOC109623265 isoform X2 [Aedes albopictus]) HSP 1 Score: 77.7962 bits (190), Expect = 1.012e-13 Identity = 49/162 (30.25%), Postives = 79/162 (48.77%), Query Frame = 0 Query: 37 TSELEEWSLVELNGTLNCSGRGKPASTEEGLGGLPLGDLSFPALNKPVLVIGAHKLEGEIVRLNKPFLVM-----RKRKLSREGVT------PEKRRTSGASQQTAADTTPSERSSAGSPEGLGDEGQLIRDDERGEDTAYDVVGVVRQKLLFKERPKPLVS 187 T +++EW +VEL G L G + + G +GDL + +P+L+IG H L+G + +++KP LVM RKR+++ PE SQ + D+T + + L E + + T Y V VV+ K+LFK RPKP+++ Sbjct: 139 TGDIDEWCIVELQGDLEVRG-------DRIMDGQFIGDLLYNKYGQPILIIGHHILQGRLQKMDKPLLVMEKCETRKRRITEPAANNEPEDDPENETMLDVSQVSHLDSTIASSNRTVLDSTLAVEHKTV------PKTEYQVRAVVKHKILFKARPKPIIA 287
BLAST of EWM21630.1 vs. NCBI_GenBank
Match: gi|780122547|ref|XP_001184483.3| (PREDICTED: LOW QUALITY PROTEIN: chromosome transmission fidelity protein 8 homolog [Strongylocentrotus purpuratus]) HSP 1 Score: 74.3294 bits (181), Expect = 1.223e-13 Identity = 47/146 (32.19%), Postives = 72/146 (49.32%), Query Frame = 0 Query: 42 EWSLVELNGTLNCSGRGKPASTEEGLGGLPLGDLSFPALNKPVLVIGAHKLEGEIVRLNKPFLVMRKRKLSREGVTPEKRRTSGASQQTAADTTPSERSSAGSPEGLGDEGQLIRDDERGEDTAYDVVGVVRQKLLFKERPKPLVS 187 EW L+EL G + + E L G +GDL F PVL+IG H L G++ L KPF+V+ K + + + + G A D S+ +G G + L + D DT Y V V+++K++FK RPKP+++ Sbjct: 17 EWMLIELQGAIE-------SPDNEQLTGRSIGDLHFNLKGVPVLIIGHHILYGKVTDLEKPFIVLMKNENAAKAI-------DGDHASDAMDVDSSQ-------DGNGRDDTLYQQD----DTYYYVNAVIKKKMIFKARPKPIIT 137
BLAST of EWM21630.1 vs. NCBI_GenBank
Match: gi|1113746067|ref|XP_014461657.2| (PREDICTED: chromosome transmission fidelity protein 8 homolog [Alligator mississippiensis] >gi|1011605493|gb|KYO42258.1| chromosome transmission fidelity 8-like protein [Alligator mississippiensis]) HSP 1 Score: 72.4034 bits (176), Expect = 3.855e-13 Identity = 51/148 (34.46%), Postives = 67/148 (45.27%), Query Frame = 0 Query: 40 LEEWSLVELNGTLNCSGRGKPASTEEGLGGLPLGDLSFPALNKPVLVIGAHKLEGEIVRLNKPFLVMRKRKLSREGVTPEKRRTSGASQQTAADTTPSERSSAGSPEGLGDEGQLIRDDERGEDTAYDVVGVVRQKLLFKERPKPLVS 187 LEEW LVEL G + A GL G LGDL + + PVL++G H L G+ VRL KPF V+ KR GA +Q AD +P+ T Y V +++ KLLFK RPKP+++ Sbjct: 16 LEEWVLVELQGEIQ-------ARCSAGLAGNLLGDLHYTSQGVPVLIVGHHILYGKTVRLEKPFAVLTKR---------------GAGEQ-GADPSPA--------------------------THYLVTALIKTKLLFKTRPKPIIT 114
BLAST of EWM21630.1 vs. NCBI_GenBank
Match: gi|170041190|ref|XP_001848356.1| (conserved hypothetical protein [Culex quinquefasciatus] >gi|167864721|gb|EDS28104.1| conserved hypothetical protein [Culex quinquefasciatus]) HSP 1 Score: 72.7886 bits (177), Expect = 7.433e-13 Identity = 46/151 (30.46%), Postives = 73/151 (48.34%), Query Frame = 0 Query: 39 ELEEWSLVELNGTLNCSGRGKPASTEEGLGGLPLGDLSFPALNKPVLVIGAHKLEGEIVRLNKPFLVMRKRKLSREGVTPEKRRTSGASQQTAADTTPSER--SSAGSPEGLGDEGQLIRDDERGEDTAYDVVGVVRQKLLFKERPKPLVS 187 ++EEW +VEL G L G + + G +GDL + +P+L+IG H L+G +++KP LVM K + + + +T D + SS S + + + + T Y V VVRQK+LFK RPKP+++ Sbjct: 8 DIEEWCIVELQGDLEVRG-------DRMMDGQFIGDLLYNKYGQPILIIGHHILQGRCQKIDKPLLVMEKCCTRGKQQQQRRTQDDDEDNETMLDVSQVSHLDSSIASSNRTVLDSTVAVEHKTVPKTEYLVRAVVRQKVLFKARPKPIIA 151
BLAST of EWM21630.1 vs. NCBI_GenBank
Match: gi|390341261|ref|XP_001199744.2| (PREDICTED: chromosome transmission fidelity protein 8 homolog [Strongylocentrotus purpuratus]) HSP 1 Score: 72.4034 bits (176), Expect = 7.438e-13 Identity = 46/146 (31.51%), Postives = 69/146 (47.26%), Query Frame = 0 Query: 42 EWSLVELNGTLNCSGRGKPASTEEGLGGLPLGDLSFPALNKPVLVIGAHKLEGEIVRLNKPFLVMRKRKLSREGVTPEKRRTSGASQQTAADTTPSERSSAGSPEGLGDEGQLIRDDERGEDTAYDVVGVVRQKLLFKERPKPLVS 187 EW L+EL G + + E L G +GDL F PVL+IG H L G++ L KPF+V+ K + A++ D S +G G + L + D DT Y V V+++K++FK RPKP+++ Sbjct: 17 EWMLIELQGAIE-------SPDNEQLTGRFIGDLHFNLKGVPVLIIGHHILYGKVTDLEKPFIVLMKNE--------------NAAKVIDGDHASDAMDVDSSQDGNGRDNTLSQQD----DTYYYVNAVIKKKMIFKARPKPIIT 137 The following BLAST results are available for this feature:
BLAST of EWM21630.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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