EWM21637.1, cds9060 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21637.1 vs. NCBI_GenBank
Match: gi|585101892|gb|EWM21637.1| (hypothetical protein Naga_100012g41 [Nannochloropsis gaditana]) HSP 1 Score: 870.152 bits (2247), Expect = 0.000e+0 Identity = 431/431 (100.00%), Postives = 431/431 (100.00%), Query Frame = 0 Query: 1 MRRSLARSCPSPPSQHQLDRGSRRPSIMRTARSCLTLAMSLVSLVLTTTPAMAFFNAGVCRQFGTLQPFRPPQPTLSVSARRAAVVMMSDLDRAAKLRQEAEKLEQELKAVQASRPKPVVTEEKPAGPTPRYLSFEQLKAEVEQAMASSAVVDTALKQLKESGALTKFESGSAKGFRRYSAEQFEQATGFPPQDVESGGTQDDLKWALGAVMAASSLAVVGGGFLGGFAGTLLVYLFLLIPITFIGIGSVAPGVISVFVVLVSNLLDGKAAERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADFLYLVALMDLVRPSLRAGQKNDLVLYSALTAHKLLTANKGKLERLAEKMAAKASLAEIVAVMES 431 MRRSLARSCPSPPSQHQLDRGSRRPSIMRTARSCLTLAMSLVSLVLTTTPAMAFFNAGVCRQFGTLQPFRPPQPTLSVSARRAAVVMMSDLDRAAKLRQEAEKLEQELKAVQASRPKPVVTEEKPAGPTPRYLSFEQLKAEVEQAMASSAVVDTALKQLKESGALTKFESGSAKGFRRYSAEQFEQATGFPPQDVESGGTQDDLKWALGAVMAASSLAVVGGGFLGGFAGTLLVYLFLLIPITFIGIGSVAPGVISVFVVLVSNLLDGKAAERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADFLYLVALMDLVRPSLRAGQKNDLVLYSALTAHKLLTANKGKLERLAEKMAAKASLAEIVAVMES Sbjct: 1 MRRSLARSCPSPPSQHQLDRGSRRPSIMRTARSCLTLAMSLVSLVLTTTPAMAFFNAGVCRQFGTLQPFRPPQPTLSVSARRAAVVMMSDLDRAAKLRQEAEKLEQELKAVQASRPKPVVTEEKPAGPTPRYLSFEQLKAEVEQAMASSAVVDTALKQLKESGALTKFESGSAKGFRRYSAEQFEQATGFPPQDVESGGTQDDLKWALGAVMAASSLAVVGGGFLGGFAGTLLVYLFLLIPITFIGIGSVAPGVISVFVVLVSNLLDGKAAERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADFLYLVALMDLVRPSLRAGQKNDLVLYSALTAHKLLTANKGKLERLAEKMAAKASLAEIVAVMES 431
BLAST of EWM21637.1 vs. NCBI_GenBank
Match: gi|873221459|emb|CEM33345.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 133.265 bits (334), Expect = 5.199e-31 Identity = 111/413 (26.88%), Postives = 191/413 (46.25%), Query Frame = 0 Query: 45 VLTTTPAMAF----FNAGVCRQFGTLQPFR--PPQPTLSVSARRAAVVMMSDLDRAAKLRQEAEKLE-QELKAVQASRPKPVVTEEKPAGPTP-----------------RYLSFEQLKAEVEQAMASSAVVDTALKQLKESGALTKFESGSAKGFRRYSAEQFEQATGFPPQDVESGGTQDDL--KWALGAVMAASSLAVVGGGFLGGFAGTLLVYLFLLIPITFIGIGSVAPGVISVFVVLVSNLLDGKAAERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADFLYLVALMDLVRPSLRAGQKNDLVLYSALTAHKLLTANKGKLERLAEKMAAKASLAEIVAVMES 431 +L+ A+AF F V R ++ R PP+ L S+ A V + L+ AAKLR+EA +E Q+ K +A R + K A P R L+ + + + + S+ T L +LKE G + + S + + + ++ +TG ++S + D + +G ++ ++ LA+ F+GG G L YLF +PI + IGS+ PGV+ V N DG ER+ H+A+ FL GYLLG P V E T+ +++Y++ D + + R+ + + V+AI+G E ++Y D D Y+ LM +P L GQ+ + +S+L A+++L ++ ++ LA M A ++E + V+E+ Sbjct: 11 ILSIYDALAFQPSTFTLSVPRPHLPVESIRRRPPRHHLYASSDDADVQKL--LEEAAKLREEASAMEVQKAKDDEADRQRQEAEAAKQAAMKPADAPQTNAAAAPPPAEARLLT-SPVASVPKLPLDSAVACATKLDELKEQGVIGYWNSEARPSYYNVESYTWKASTGCDDNAIQSKSGETDFFQRLFVGTLIVSTLLAIGSSQFIGGNLGALFTYLFAALPIVVVAIGSINPGVLLGLYTNVQNAADGSFKERRRWHEASHFLVGYLLGYPPRRVVKAPE--TSLVEFYESRDDS-------------QDRRQPLERSTLEPLCVVAISGISGELLKYKTAKDTDVDINYIQNLMKRTQPQLSGGQQTSIPRWSSLAAYQILEKHQPVVDELAGAMGGGADISECIRVVEN 405
BLAST of EWM21637.1 vs. NCBI_GenBank
Match: gi|1072230469|gb|OEU15202.1| (hypothetical protein FRACYDRAFT_218197 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 106.686 bits (265), Expect = 1.065e-21 Identity = 85/301 (28.24%), Postives = 148/301 (49.17%), Query Frame = 0 Query: 154 TALKQLKESGALTKFESGSAKG----FRRY--SAEQFEQATGFPPQDVESGG---TQDDLKWALGAVMAASSLAVVGGGFLGGFA---------GTLLVYLFLLIPITFIGIGSVAPGVISVFVVLV-SNLLDGKAA--ERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADFLYLVALMDLVRPS---LRAGQKNDLVLYSALTAHKLLTANKGKLERLAEKMAAKASLAEIVAVME 430 +AL +L+ G+++ ++S + + R + S E G + + G + DD K+ +L V GG + G A G Y F L+PI ++G+GS P I+ +VL+ + DG + ER H+AA FL GYL GLP+ + +T + ++++ + DGN A ++ ++I V+A++G+VAE M +GK + L+ L ++ R S L A ++ DL + ALTA++LL NK +L+ L + + + S+A+ VA++E Sbjct: 125 SALGELRNEGSISIYKSATEENGSGDLRSFPVSLSMLENRCGLTSEKLGIGEEIVSLDDFKYG--------TLWVTGGASVAGIASLALLPENVGATFCYFFALLPILWLGVGSTVPAAIAGAIVLIRGDDDDGSVSKTERVCRHEAAHFLCGYLCGLPVANYETSED--IPRVEFHYSQDGNENIATAN----------RELKSDEINALTVVALSGAVAEAMSFGKA--KGGSNADLMELQNIFRKSEIFLGAEKQQDLTRWGALTAYRLLNTNKTQLDALVKAFSEQKSVADCVAIIE 403
BLAST of EWM21637.1 vs. NCBI_GenBank
Match: gi|551668904|ref|XP_005837211.1| (hypothetical protein GUITHDRAFT_151256 [Guillardia theta CCMP2712] >gi|428181367|gb|EKX50231.1| hypothetical protein GUITHDRAFT_151256 [Guillardia theta CCMP2712]) HSP 1 Score: 103.219 bits (256), Expect = 1.641e-20 Identity = 96/332 (28.92%), Postives = 153/332 (46.08%), Query Frame = 0 Query: 121 TEEKPAGPTPRYLSFEQ----LKAEVEQAMASSA--VVDTALKQLKESGALTKFESGSAKGFRRYSAEQFEQATGFPPQDVE-----SGGTQ-DDLKWALGAVMAASSLAVVGGGFLGGFAGTLLVYLFLL---IPITFIGIGSVAPGVISVFVVLVSNLLDG-KAAERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADF-----LYLVALMDLVRPSLRAGQKNDLVLYSALTAHKLLTANKGKLERLAEKMAAKASLAEIVAVMES 431 T+ K R LSFE+ +K ++A SA V DT ++LK G L K+ S K R S + ++ D++ SGG Q +DLK A+S++ V G +GG G + +L L IP+ +G+GSVAP +I + + D ER+ H+AA L GY+ GLPIE + + K+YD +GN D+ A A P F +E++ AV+ ++G + E Y + Q D +Y A + +R + + + + A+ A LL N RL +++ AS+ E +A +E+ Sbjct: 95 TDAKEENAGNRALSFEETLKEIKEPCKKAWEGSATDVYDT-FERLKSQGVLKKWNSMPVKS-RAVSQNELKRMLK-TELDLDTVLGISGGVQTEDLKKLTVGAFASSAIIGVLGTAIGGETGGFVYWLTFLGASIPLVLVGVGSVAPSLIGGVISGLQWQFDKTNTMERRIRHEAAHILAGYMCGLPIEGYEVEP---MPMCKFYDRREGNIDDVEAWKKARP-------FNEEEVDKLAVVCLSGVMGELSLYERAAGGQQDLEQLQEVYFRAESEKLRNNR---VREETTRWGAMKARTLLEENNDSFMRLCKQLEKGASIEECIASIEA 410
BLAST of EWM21637.1 vs. NCBI_GenBank
Match: gi|397633736|gb|EJK71112.1| (hypothetical protein THAOC_07480 [Thalassiosira oceanica]) HSP 1 Score: 102.064 bits (253), Expect = 4.040e-20 Identity = 64/205 (31.22%), Postives = 104/205 (50.73%), Query Frame = 0 Query: 230 GTLLVYLFLLIPITFIGIGSVAPGVISVFVVLVSNLLDGKAAE----RKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADFLYLVALMDLVRPSLRAGQKNDLVLYSALTAHKLLTANKGKLERLAEKMAAKASLAEIVAVME 430 G + YLF LIP+ FIGIGS +PG+I+ + + D + AE R H+A FL G+L GLPI+S + + G ++++ G G E E+I +V+A++GSVAE + + + D L L + + A ++ DL + ALT++ LL +N K E+L + + SL++ VA++E Sbjct: 214 GATVTYLFALIPVGFIGIGSTSPGIIAA--AIKGSRGDSEDAEQQRERICRHEAGHFLCGWLCGLPIKSYNVNDDTGVACVEFH--------------TGGAGQE----LSDEEIASLSVVAMSGSVAEILNFDVAKGGENDLLELQNCFRKSKEFIGAAKQQDLTRWGALTSYNLLKSNAQKYEKLVDAFKQRKSLSDCVALLE 398
BLAST of EWM21637.1 vs. NCBI_GenBank
Match: gi|298706984|emb|CBJ34234.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 90.1225 bits (222), Expect = 7.137e-18 Identity = 55/115 (47.83%), Postives = 71/115 (61.74%), Query Frame = 0 Query: 202 DDLKWALGAVMAASSLAVVGGGFLGGF-AGTLLVYLFLLIPITFIGIGSVAPGVISVFVVLVSNLLDGKAAERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGN 315 DDLK+ALG V S A VG G G G Y F L+PI F+GIGS APGVI+ + V ER+ H+AA FL+GYL GLPI+S K A+GGTT +++YD+ +G+ Sbjct: 2 DDLKYALGFVCIFSFAAAVGVGAAIGGNVGASFTYFFALLPIVFLGIGSTAPGVITAVINNVRRKSQDDYEERRVRHEAAHFLSGYLCGLPIKSYK--ADGGTTLVEFYDSAEGD 114
BLAST of EWM21637.1 vs. NCBI_GenBank
Match: gi|1210528625|dbj|GAX12822.1| (hypothetical protein FisN_15Hh301 [Fistulifera solaris]) HSP 1 Score: 94.3597 bits (233), Expect = 1.123e-17 Identity = 101/359 (28.13%), Postives = 145/359 (40.39%), Query Frame = 0 Query: 92 DRAAKLRQEAEKLEQELKAVQASRPKPVVTEEKPAGPTPRYLSFEQLKAEVEQAMASSAVVDTALKQLKESGALTKFESGSAKGF--------RRYSAEQFEQATGFPPQDVESGGTQDDLKWALGAVMAASSLAVVGG-GFLGGFAGTLLVYLFLLIPITFIGIGSVAPGVISVFVVLV-------SNLLDGKAAERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADFLYLVALMDLVRPS---LRAGQKNDLVLYSALTAHKLLTANKGKLERLAEKMAAKASLAEIVAVMES 431 + AAK RQEAE+L QEL T KPA P + V+D A E KF S + + F R + + +DV DD K+A V +L + FL G + YL LIP+ F+ +GS AP I+ + + N++ A ER H+AA F GY GLP++ Y DG D+ + + PG E R ++ + V A++G + E + +G VI A L + R S L A + DL + ALTA LL NK E++ + M KASL E + ++ES Sbjct: 44 EAAAKARQEAERLRQELGQS--------TTTSKPAAP---------------KIAPKPTVMDVAFA---EDQTFDKFGSANLRTFPVGLPMLQSRLNITAAQLGLAESDEDV----NLDDFKYATLFVTGGCTLTGIASLAFLPPNVGATVCYLVALIPVLFLAVGSTAPAAIAGAIKTIKGQGGDRDNIIS--AQERMLRHEAAHFCCGYWCGLPVQE--------------YRVEDG---DMCVEFSVAPGTE-RGEYTSTQVAALTVTALSGVLGEALTFGSVIPGSATQDLLQLEQQVFRRSENFLGAVAQQDLTRWGALTAGLLLRQNKEAYEKIVQAMERKASLRECIELLES 352
BLAST of EWM21637.1 vs. NCBI_GenBank
Match: gi|224010159|ref|XP_002294037.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220970054|gb|EED88392.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 90.1225 bits (222), Expect = 2.664e-17 Identity = 65/207 (31.40%), Postives = 109/207 (52.66%), Query Frame = 0 Query: 230 GTLLVYLFLLIPITFIGIGSVAPGVISVFVVLV--SNLLDGKAAERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADFLYLVALMDLVRPS---LRAGQKNDLVLYSALTAHKLLTANKGKLERLAEKMAAKASLAEIVAVMES 431 G + YL L+PI FIG+GSVAPG+I+ + + + + ER H+A FL GYL GLP+++ + G ++++ DGN +L ++D+ +V+A++GSVAE + Y K + D L+ L + R S + A ++ DL + ALT+++LL N E+L + K SL+E V+++E+ Sbjct: 20 GATVCYLVALVPIAFIGVGSVAPGIIAGVITSARGKSEDEERRRERVCRHEAGHFLCGYLCGLPVKNYEIVDSTGVACVEFH--TDGNGGELT----------------EDDVAALSVVAMSGSVAEIIAYDKATGGEND---LIELQNCFRKSKEFIGAARQQDLTRWGALTSYELLRKNSEVYEKLVKAFGEKKSLSECVSIIEA 205
BLAST of EWM21637.1 vs. NCBI_GenBank
Match: gi|676392949|ref|XP_009039752.1| (hypothetical protein AURANDRAFT_72206 [Aureococcus anophagefferens] >gi|323449735|gb|EGB05621.1| hypothetical protein AURANDRAFT_72206 [Aureococcus anophagefferens]) HSP 1 Score: 93.9745 bits (232), Expect = 8.261e-17 Identity = 61/194 (31.44%), Postives = 93/194 (47.94%), Query Frame = 0 Query: 217 LAVVGGGFLGGFAGTLLVYLFLLIPITFIGIGSVAPGVISVFVVLVSNLLDGKAAERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADFLYLVALMDLVRPSLRAGQKNDLVLYSALTAHKLLTANKGKLE 410 LAV G +GG G Y+F ++PI F+G+GS +PGVI + V + A R+ H+AA + GY LGLP+ + DA +++YD GPGP+ R +D A +A+AG+VAE +G+ Q DF L L D V P L ++ L A+ +L ++ + + Sbjct: 864 LAVGSGALIGGNLGAAFTYIFAVLPIIFLGVGSSSPGVI-LAVYGATKQAKENTAPRRRRHEAAHLVAGYALGLPVAAYADDA------VEFYD---------------GPGPKSR-----DDAERLACVALAGAVAECDAFGEAKGAQDDFANLQRLFDRVEPRLTPAEQQAATRRGVLNAYSVLFGSRARRD 1030
BLAST of EWM21637.1 vs. NCBI_GenBank
Match: gi|308813674|ref|XP_003084143.1| (unnamed protein product [Ostreococcus tauri] >gi|116056026|emb|CAL58559.1| unnamed product [Ostreococcus tauri] >gi|1199290056|gb|OUS45157.1| hypothetical protein BE221DRAFT_193343 [Ostreococcus tauri]) HSP 1 Score: 91.2781 bits (225), Expect = 1.042e-16 Identity = 64/240 (26.67%), Postives = 111/240 (46.25%), Query Frame = 0 Query: 192 PQDVESGGTQDDLKWALGAVMAASSLAVVGGGFLGGFAGTLLVYLFLLIPITFIGIGSVAPGVISVFVVLVSNLLDGKAAERKTTHQAARFLTGYLLGLPIESVKTDAEGGTTFIKYYDTMDGNFKDLGAQAAAGPGPEPRKKFGQEDILGHAVLAIAGSVAERMEYGKVIDRQADFLYLVALMDLVRPSLRAGQKNDLVLYSALTAHKLLTANKGKLERLAEKMAAKASLAEIVAVMES 431 P+ + +DLK + + S AVV G L G G YL IPI + +GS APG++ V ++ + D + R H+A FL GY G+P+ S + + + M+ + Q A K ++L AV+++AG AE ME+ +V+ + AD L +++ V P L + ++ ++ A +L+ N+ + L EKM AS+ + + +E+ Sbjct: 113 PEQIAKPSDANDLKLIVTVTLTCSLAAVVVGATLPGDIGAFGAYLLGGIPIVVLAVGSTAPGLLRVATDRLARV-DPEYRRRIARHEAGHFLVGYACGVPVGSYNLGIDES-----HVNFMESKLERKIFQGA---------KLSSSEVLPLAVISMAGVAAEAMEFEEVMGQSADLFDLQRILNRVDPKLNDASQQEITRWAVFQAATILSENRAAFDALTEKMQEGASVVDCLQTIEA 337 The following BLAST results are available for this feature:
BLAST of EWM21637.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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