EWM21638.1, cds9059 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21638.1 vs. NCBI_GenBank
Match: gi|585101893|gb|EWM21638.1| (Sulfotransferase domain protein [Nannochloropsis gaditana]) HSP 1 Score: 842.417 bits (2175), Expect = 0.000e+0 Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0
Query: 1 MAMSLPQHRHTVLMLPRTYSSPGRYGSRRNSINDRAWLRGVTVVKWVWLVACILLLCLSLHFWAETVWVGVDEGGGTIPLSQAIRQTLRLATKRPLVGTKEKPLLIVGTHHKTGTALMALVLREAFSVHKKMTGGKPSGVMMGYFGNPETMDAPFAFYYCDHLYSDTWNKTDSSSSDHLPKLVDNHQFFKGHYKFVHLVRDPMELVISAYLYHHAGPPDWQEVWLYEQHPLSSYQTILNNSSCDPGTRLTMSWFDLLRCLNQKEGLMAEALFQTHFGAVPSMVAAVQHIQGDQKHAQVLQLGLEEFQSGFDETVRRMFEFLGFRPRVVESIVRGCAPFDLRRQSSGEKERNEHVTTGKFDKEKLREMMRKYEDPVFLQARRVLGYADETEGEKKGRKSAALL 402
MAMSLPQHRHTVLMLPRTYSSPGRYGSRRNSINDRAWLRGVTVVKWVWLVACILLLCLSLHFWAETVWVGVDEGGGTIPLSQAIRQTLRLATKRPLVGTKEKPLLIVGTHHKTGTALMALVLREAFSVHKKMTGGKPSGVMMGYFGNPETMDAPFAFYYCDHLYSDTWNKTDSSSSDHLPKLVDNHQFFKGHYKFVHLVRDPMELVISAYLYHHAGPPDWQEVWLYEQHPLSSYQTILNNSSCDPGTRLTMSWFDLLRCLNQKEGLMAEALFQTHFGAVPSMVAAVQHIQGDQKHAQVLQLGLEEFQSGFDETVRRMFEFLGFRPRVVESIVRGCAPFDLRRQSSGEKERNEHVTTGKFDKEKLREMMRKYEDPVFLQARRVLGYADETEGEKKGRKSAALL
Sbjct: 1 MAMSLPQHRHTVLMLPRTYSSPGRYGSRRNSINDRAWLRGVTVVKWVWLVACILLLCLSLHFWAETVWVGVDEGGGTIPLSQAIRQTLRLATKRPLVGTKEKPLLIVGTHHKTGTALMALVLREAFSVHKKMTGGKPSGVMMGYFGNPETMDAPFAFYYCDHLYSDTWNKTDSSSSDHLPKLVDNHQFFKGHYKFVHLVRDPMELVISAYLYHHAGPPDWQEVWLYEQHPLSSYQTILNNSSCDPGTRLTMSWFDLLRCLNQKEGLMAEALFQTHFGAVPSMVAAVQHIQGDQKHAQVLQLGLEEFQSGFDETVRRMFEFLGFRPRVVESIVRGCAPFDLRRQSSGEKERNEHVTTGKFDKEKLREMMRKYEDPVFLQARRVLGYADETEGEKKGRKSAALL 402
BLAST of EWM21638.1 vs. NCBI_GenBank
Match: gi|145351108|ref|XP_001419928.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144580161|gb|ABO98221.1| predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 74.3294 bits (181), Expect = 6.562e-11 Identity = 70/297 (23.57%), Postives = 120/297 (40.40%), Query Frame = 0
Query: 106 IVGTHHKTGTALMALVLREAFSVHKKMTGGKPSGVMMGYFGNPETMDAPFAFYYCDHLYSDTWNKTDSSSSDH----LPKLVDNHQFFK-----------GHYKFVHLVRDPMELVISAYLYHHAGPPDWQEVWLYEQHPLSSYQTILNNSSCDPGTRLTMSWFDLLRCLNQKEGLMAEALFQTHFGAVPSMVAAVQHIQGDQKHAQVLQLGLEEFQSGFDETVRRMFEFLGFRPRVVESIVRGCAPFDLRRQSSGEKERNEHVTTGKFDKEKLREMMRKYED--PVFLQARRVLGY 385
V THHKTGTALM + FS + + + F + E + + + + D H LP ++ ++ + Y+ VH+VRDP+++++S YH P D E WL +S+ + L+ + K+ + AE F + A+ ++Q ++ L L LE F+ FD T+ R FL F + + S+++ + D+ + S E +NEH T + D+ E R+ +D RR +GY
Sbjct: 134 FVATHHKTGTALM----HDVFSTIANRSSPPYTFFDVRAFEDAELVVNEVTGKGLERAARRRFREADIVLDYHFGKSLPAFIEQNETTRLLQSMISVSNAREYRIVHVVRDPLDVLVSGLAYHARSPND--ERWLSRARVAE------------------LSYAEFLKTASPKDAIAAEMSFSDD----EIRMLALTYVQCERNRDTCLNLRLEAFERNFDRTLERALRFLRFPSQNITSMIQIASVHDVSKWSEDELRKNEHYTK-RIDRRPYYEAAREDDDIWRTITALRRAMGY 401
BLAST of EWM21638.1 vs. NCBI_GenBank
Match: gi|303277659|ref|XP_003058123.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226460780|gb|EEH58074.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 73.9442 bits (180), Expect = 1.296e-10 Identity = 56/197 (28.43%), Postives = 92/197 (46.70%), Query Frame = 0
Query: 193 YKFVHLVRDPMELVISAYLYHHAGPPDWQEVWLYEQHPLSSYQTILNNSSCDPGTRLTMSWFDLLRCLNQKEGLMAEALFQTHFGAVPSMVAAVQHIQGDQKHAQVLQLGLEEFQSGFDETVRRMFEFLGFRPRVVESIVRGCAPFDLRRQSSGEKERNEHVTTGKFDKEKLREMMRK--YEDPVFLQARRVLGYAD 387
Y+ VH+VRDP+E+++S +LYH P D Q WL+E P+ + ++ D L N E +MAE + + A + ++ D + + LEEF FD ++F FL F R + +V+ FD+RR + E + NEH T + D+ + ++R+ + + R LGY D
Sbjct: 391 YRMVHVVRDPVEVLVSGFLYHRRRPADEQ--WLFE--PVKELRG--------------KTYADHLTTANPAEAMMAE--LSMADDELRMLALAYRDVERDP---NAMNVKLEEFFDDFDAAAGKVFRFLRFDERDIPELVKLAGTFDMRRWTEEELKVNEHFTR-REDRTPYQAVVREDGFLNKTMSALRYALGYED 563
BLAST of EWM21638.1 vs. NCBI_GenBank
Match: gi|255072049|ref|XP_002499699.1| (predicted protein [Micromonas commoda] >gi|226514961|gb|ACO60957.1| predicted protein [Micromonas commoda]) HSP 1 Score: 66.6254 bits (161), Expect = 2.695e-8 Identity = 62/204 (30.39%), Postives = 91/204 (44.61%), Query Frame = 0
Query: 191 GHYKFVHLVRDPMELVISAYLYHHAGPPDWQEVWLYEQHPLSSYQTILNN-SSCDPGTRLTMSWFDLLRCLNQKEGLMAEALFQTHFGAVPSMVAAVQHIQGDQKHAQVLQLGLEEFQSGFDETVRRMFEFLGFRPRVVESIVRGCAPFDLRRQSSGEKERNEHVTTGKFDKEKLREMMRKYEDPVFLQA-----RRVLGYADE 388
G Y+ VH+VRDP +++IS YLYH P D E WL+E P T + +S D L + ++AE + ++ A + ++ D + + + LE F FD T+ + FL F V +V+ FD+ R S E NEH T K D+ E +R +DP FL A R +GY E
Sbjct: 318 GEYRAVHVVRDPTQVLISGYLYHRRLPGD--ERWLFEPSPELGGGTYADRLASADK--------------LGATDAMLAEIAMADD--ELRALALAYRDVERDPRG---MNVKLESFFEDFDGTMGAVLRFLEFEEGDVGEMVKLAGEFDVGRWSQEELAANEHFTQ-KEDRRPYVEAIR--QDP-FLNATVSYMRYAMGYVHE 496
BLAST of EWM21638.1 vs. NCBI_GenBank
Match: gi|1214000628|ref|WP_088713234.1| (hypothetical protein [Pacificimonas flava] >gi|1212799132|gb|OWV34534.1| hypothetical protein B5C34_14420 [Pacificimonas flava]) HSP 1 Score: 62.003 bits (149), Expect = 3.250e-7 Identity = 50/168 (29.76%), Postives = 78/168 (46.43%), Query Frame = 0
Query: 196 VHLVRDPMELVISAYLYHHAGPPDWQEVWLYEQHPLSSYQTILNNSSCD--PGTRLTM---SWFDLLRCLNQKEGLMAEALFQTHFG--AVPSMVAAVQHIQGDQKHAQVLQLGLEEFQSGFDETVRRMFEFLGFRPRVVESIVRGCAPFDLRRQSSGEKERNEHVTT 356
VH+VRDP ++++S Y YH W + ++ I+ + S D R + S+ L L+++ GL+ E HF +M A D + VL++ EE S FD+T R+F F+GF R+ E + DL R+S E E+ HVT+
Sbjct: 70 VHVVRDPRDVLVSGYQYHLRTKEPWCSSTDFTGSSPTAIPYIIRHRSDDFLEAYRADLAGQSYQARLNELDRRGGLIFE---MDHFARWTFEAMEA------WDYERDDVLEVTFEELMSNFDDTFARIFTFMGFEGRLFEEAMETARTQDLSRKSEAEIEKMGHVTS 228
BLAST of EWM21638.1 vs. NCBI_GenBank
Match: gi|612389312|ref|XP_007510176.1| (predicted protein [Bathycoccus prasinos] >gi|412992541|emb|CCO18521.1| predicted protein [Bathycoccus prasinos]) HSP 1 Score: 62.7734 bits (151), Expect = 4.366e-7 Identity = 77/312 (24.68%), Postives = 126/312 (40.38%), Query Frame = 0
Query: 106 IVGTHHKTGTALMALVL----RE---------AFSVHKKMTGGKPSGVMMGYFGNPETMDAPFAFYYCDHLYSDTWNKTDSSSSDHLPKLVDNHQ--------FFKGHYKFVHLVRDPMELVISAYLYHHAGPPDWQEVWLYEQHPLSSYQTILNNSSCDPGTRLTMSWFDLLRCLNQKEGLMAEALFQTHFGAVPSMVAAVQHIQGDQKHAQVLQLGLEEFQSGFDETVRRMFEFLGFRPRVVESIVRGCAPFDLRRQSSGEKERNEHVTTGKFDKEKLREMMRKYEDPVFLQA----RRVLGYADETEGE 392
I+GTHHKTGTALM V RE + + + G S ++ + D +++ + S N D SSD + + Q +++G Y+ +HL+RDP + ++S LYH P D E WL E + + N++S + + R N + L AE + + + A Q + D + + + LE F D+ +R FL F +E +VR + + E E + H T+ D+ K E M YE+ + R LGY + +
Sbjct: 257 IIGTHHKTGTALMRDVFDSISREFEYNFFNLRVYEDYPYLQPGNLSSII-------DEADVILDYHFSKPIPSYFINAEDWYSSDRRVRRFNKQQRECQSLASYYRGSYRIIHLIRDPRDALVSGVLYHMQNPED--ESWLRE---IRVGDELFNSTSSSSYVQ------SIRRLKNPVDALAAE--LKIADDELRMLGLAAQDCEID---IRAMNVRLESFFDELDDILR----FLEFPEEDIEEMVRVANLHNAKTWEKNETEHHVHFTSENPDRHKYIEAM--YEEGFVNKTVSYLRYALGYTNNASSD 539 The following BLAST results are available for this feature:
BLAST of EWM21638.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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