EWM21638.1, cds9059 (CDS) Nannochloropsis gaditana

Overview
NameEWM21638.1
Unique Namecds9059
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:308962..310170 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21638.1
ProductSulfotransferase domain protein
Orig transcript idgnl|cribi|Naga_100012g40.1970.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:308962..310170 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008146sulfotransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR000863Sulfotransferase_dom
Homology
BLAST of EWM21638.1 vs. NCBI_GenBank
Match: gi|585101893|gb|EWM21638.1| (Sulfotransferase domain protein [Nannochloropsis gaditana])

HSP 1 Score: 842.417 bits (2175), Expect = 0.000e+0
Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0
Query:    1 MAMSLPQHRHTVLMLPRTYSSPGRYGSRRNSINDRAWLRGVTVVKWVWLVACILLLCLSLHFWAETVWVGVDEGGGTIPLSQAIRQTLRLATKRPLVGTKEKPLLIVGTHHKTGTALMALVLREAFSVHKKMTGGKPSGVMMGYFGNPETMDAPFAFYYCDHLYSDTWNKTDSSSSDHLPKLVDNHQFFKGHYKFVHLVRDPMELVISAYLYHHAGPPDWQEVWLYEQHPLSSYQTILNNSSCDPGTRLTMSWFDLLRCLNQKEGLMAEALFQTHFGAVPSMVAAVQHIQGDQKHAQVLQLGLEEFQSGFDETVRRMFEFLGFRPRVVESIVRGCAPFDLRRQSSGEKERNEHVTTGKFDKEKLREMMRKYEDPVFLQARRVLGYADETEGEKKGRKSAALL 402
            MAMSLPQHRHTVLMLPRTYSSPGRYGSRRNSINDRAWLRGVTVVKWVWLVACILLLCLSLHFWAETVWVGVDEGGGTIPLSQAIRQTLRLATKRPLVGTKEKPLLIVGTHHKTGTALMALVLREAFSVHKKMTGGKPSGVMMGYFGNPETMDAPFAFYYCDHLYSDTWNKTDSSSSDHLPKLVDNHQFFKGHYKFVHLVRDPMELVISAYLYHHAGPPDWQEVWLYEQHPLSSYQTILNNSSCDPGTRLTMSWFDLLRCLNQKEGLMAEALFQTHFGAVPSMVAAVQHIQGDQKHAQVLQLGLEEFQSGFDETVRRMFEFLGFRPRVVESIVRGCAPFDLRRQSSGEKERNEHVTTGKFDKEKLREMMRKYEDPVFLQARRVLGYADETEGEKKGRKSAALL
Sbjct:    1 MAMSLPQHRHTVLMLPRTYSSPGRYGSRRNSINDRAWLRGVTVVKWVWLVACILLLCLSLHFWAETVWVGVDEGGGTIPLSQAIRQTLRLATKRPLVGTKEKPLLIVGTHHKTGTALMALVLREAFSVHKKMTGGKPSGVMMGYFGNPETMDAPFAFYYCDHLYSDTWNKTDSSSSDHLPKLVDNHQFFKGHYKFVHLVRDPMELVISAYLYHHAGPPDWQEVWLYEQHPLSSYQTILNNSSCDPGTRLTMSWFDLLRCLNQKEGLMAEALFQTHFGAVPSMVAAVQHIQGDQKHAQVLQLGLEEFQSGFDETVRRMFEFLGFRPRVVESIVRGCAPFDLRRQSSGEKERNEHVTTGKFDKEKLREMMRKYEDPVFLQARRVLGYADETEGEKKGRKSAALL 402          
BLAST of EWM21638.1 vs. NCBI_GenBank
Match: gi|145351108|ref|XP_001419928.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144580161|gb|ABO98221.1| predicted protein [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 74.3294 bits (181), Expect = 6.562e-11
Identity = 70/297 (23.57%), Postives = 120/297 (40.40%), Query Frame = 0
Query:  106 IVGTHHKTGTALMALVLREAFSVHKKMTGGKPSGVMMGYFGNPETMDAPFAFYYCDHLYSDTWNKTDSSSSDH----LPKLVDNHQFFK-----------GHYKFVHLVRDPMELVISAYLYHHAGPPDWQEVWLYEQHPLSSYQTILNNSSCDPGTRLTMSWFDLLRCLNQKEGLMAEALFQTHFGAVPSMVAAVQHIQGDQKHAQVLQLGLEEFQSGFDETVRRMFEFLGFRPRVVESIVRGCAPFDLRRQSSGEKERNEHVTTGKFDKEKLREMMRKYED--PVFLQARRVLGY 385
             V THHKTGTALM     + FS     +    +   +  F + E +         +      + + D     H    LP  ++ ++  +             Y+ VH+VRDP+++++S   YH   P D  E WL                         +S+ + L+  + K+ + AE  F          + A+ ++Q ++     L L LE F+  FD T+ R   FL F  + + S+++  +  D+ + S  E  +NEH T  + D+    E  R+ +D        RR +GY
Sbjct:  134 FVATHHKTGTALM----HDVFSTIANRSSPPYTFFDVRAFEDAELVVNEVTGKGLERAARRRFREADIVLDYHFGKSLPAFIEQNETTRLLQSMISVSNAREYRIVHVVRDPLDVLVSGLAYHARSPND--ERWLSRARVAE------------------LSYAEFLKTASPKDAIAAEMSFSDD----EIRMLALTYVQCERNRDTCLNLRLEAFERNFDRTLERALRFLRFPSQNITSMIQIASVHDVSKWSEDELRKNEHYTK-RIDRRPYYEAAREDDDIWRTITALRRAMGY 401          
BLAST of EWM21638.1 vs. NCBI_GenBank
Match: gi|303277659|ref|XP_003058123.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226460780|gb|EEH58074.1| predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 73.9442 bits (180), Expect = 1.296e-10
Identity = 56/197 (28.43%), Postives = 92/197 (46.70%), Query Frame = 0
Query:  193 YKFVHLVRDPMELVISAYLYHHAGPPDWQEVWLYEQHPLSSYQTILNNSSCDPGTRLTMSWFDLLRCLNQKEGLMAEALFQTHFGAVPSMVAAVQHIQGDQKHAQVLQLGLEEFQSGFDETVRRMFEFLGFRPRVVESIVRGCAPFDLRRQSSGEKERNEHVTTGKFDKEKLREMMRK--YEDPVFLQARRVLGYAD 387
            Y+ VH+VRDP+E+++S +LYH   P D Q  WL+E  P+   +                ++ D L   N  E +MAE         +  +  A + ++ D      + + LEEF   FD    ++F FL F  R +  +V+    FD+RR +  E + NEH T  + D+   + ++R+  + +      R  LGY D
Sbjct:  391 YRMVHVVRDPVEVLVSGFLYHRRRPADEQ--WLFE--PVKELRG--------------KTYADHLTTANPAEAMMAE--LSMADDELRMLALAYRDVERDP---NAMNVKLEEFFDDFDAAAGKVFRFLRFDERDIPELVKLAGTFDMRRWTEEELKVNEHFTR-REDRTPYQAVVREDGFLNKTMSALRYALGYED 563          
BLAST of EWM21638.1 vs. NCBI_GenBank
Match: gi|255072049|ref|XP_002499699.1| (predicted protein [Micromonas commoda] >gi|226514961|gb|ACO60957.1| predicted protein [Micromonas commoda])

HSP 1 Score: 66.6254 bits (161), Expect = 2.695e-8
Identity = 62/204 (30.39%), Postives = 91/204 (44.61%), Query Frame = 0
Query:  191 GHYKFVHLVRDPMELVISAYLYHHAGPPDWQEVWLYEQHPLSSYQTILNN-SSCDPGTRLTMSWFDLLRCLNQKEGLMAEALFQTHFGAVPSMVAAVQHIQGDQKHAQVLQLGLEEFQSGFDETVRRMFEFLGFRPRVVESIVRGCAPFDLRRQSSGEKERNEHVTTGKFDKEKLREMMRKYEDPVFLQA-----RRVLGYADE 388
            G Y+ VH+VRDP +++IS YLYH   P D  E WL+E  P     T  +  +S D               L   + ++AE         + ++  A + ++ D +    + + LE F   FD T+  +  FL F    V  +V+    FD+ R S  E   NEH T  K D+    E +R  +DP FL A     R  +GY  E
Sbjct:  318 GEYRAVHVVRDPTQVLISGYLYHRRLPGD--ERWLFEPSPELGGGTYADRLASADK--------------LGATDAMLAEIAMADD--ELRALALAYRDVERDPRG---MNVKLESFFEDFDGTMGAVLRFLEFEEGDVGEMVKLAGEFDVGRWSQEELAANEHFTQ-KEDRRPYVEAIR--QDP-FLNATVSYMRYAMGYVHE 496          
BLAST of EWM21638.1 vs. NCBI_GenBank
Match: gi|1214000628|ref|WP_088713234.1| (hypothetical protein [Pacificimonas flava] >gi|1212799132|gb|OWV34534.1| hypothetical protein B5C34_14420 [Pacificimonas flava])

HSP 1 Score: 62.003 bits (149), Expect = 3.250e-7
Identity = 50/168 (29.76%), Postives = 78/168 (46.43%), Query Frame = 0
Query:  196 VHLVRDPMELVISAYLYHHAGPPDWQEVWLYEQHPLSSYQTILNNSSCD--PGTRLTM---SWFDLLRCLNQKEGLMAEALFQTHFG--AVPSMVAAVQHIQGDQKHAQVLQLGLEEFQSGFDETVRRMFEFLGFRPRVVESIVRGCAPFDLRRQSSGEKERNEHVTT 356
            VH+VRDP ++++S Y YH      W     +     ++   I+ + S D     R  +   S+   L  L+++ GL+ E     HF      +M A       D +   VL++  EE  S FD+T  R+F F+GF  R+ E  +      DL R+S  E E+  HVT+
Sbjct:   70 VHVVRDPRDVLVSGYQYHLRTKEPWCSSTDFTGSSPTAIPYIIRHRSDDFLEAYRADLAGQSYQARLNELDRRGGLIFE---MDHFARWTFEAMEA------WDYERDDVLEVTFEELMSNFDDTFARIFTFMGFEGRLFEEAMETARTQDLSRKSEAEIEKMGHVTS 228          
BLAST of EWM21638.1 vs. NCBI_GenBank
Match: gi|612389312|ref|XP_007510176.1| (predicted protein [Bathycoccus prasinos] >gi|412992541|emb|CCO18521.1| predicted protein [Bathycoccus prasinos])

HSP 1 Score: 62.7734 bits (151), Expect = 4.366e-7
Identity = 77/312 (24.68%), Postives = 126/312 (40.38%), Query Frame = 0
Query:  106 IVGTHHKTGTALMALVL----RE---------AFSVHKKMTGGKPSGVMMGYFGNPETMDAPFAFYYCDHLYSDTWNKTDSSSSDHLPKLVDNHQ--------FFKGHYKFVHLVRDPMELVISAYLYHHAGPPDWQEVWLYEQHPLSSYQTILNNSSCDPGTRLTMSWFDLLRCLNQKEGLMAEALFQTHFGAVPSMVAAVQHIQGDQKHAQVLQLGLEEFQSGFDETVRRMFEFLGFRPRVVESIVRGCAPFDLRRQSSGEKERNEHVTTGKFDKEKLREMMRKYEDPVFLQA----RRVLGYADETEGE 392
            I+GTHHKTGTALM  V     RE          +  +  +  G  S ++       +  D    +++   + S   N  D  SSD   +  +  Q        +++G Y+ +HL+RDP + ++S  LYH   P D  E WL E   +     + N++S     +       + R  N  + L AE   +     +  +  A Q  + D    + + + LE F    D+ +R    FL F    +E +VR     + +     E E + H T+   D+ K  E M  YE+    +     R  LGY +    +
Sbjct:  257 IIGTHHKTGTALMRDVFDSISREFEYNFFNLRVYEDYPYLQPGNLSSII-------DEADVILDYHFSKPIPSYFINAEDWYSSDRRVRRFNKQQRECQSLASYYRGSYRIIHLIRDPRDALVSGVLYHMQNPED--ESWLRE---IRVGDELFNSTSSSSYVQ------SIRRLKNPVDALAAE--LKIADDELRMLGLAAQDCEID---IRAMNVRLESFFDELDDILR----FLEFPEEDIEEMVRVANLHNAKTWEKNETEHHVHFTSENPDRHKYIEAM--YEEGFVNKTVSYLRYALGYTNNASSD 539          
The following BLAST results are available for this feature:
BLAST of EWM21638.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 6
Match NameE-valueIdentityDescription
gi|585101893|gb|EWM21638.1|0.000e+0100.00Sulfotransferase domain protein [Nannochloropsis g... [more]
gi|145351108|ref|XP_001419928.1|6.562e-1123.57predicted protein [Ostreococcus lucimarinus CCE990... [more]
gi|303277659|ref|XP_003058123.1|1.296e-1028.43predicted protein [Micromonas pusilla CCMP1545] >g... [more]
gi|255072049|ref|XP_002499699.1|2.695e-830.39predicted protein [Micromonas commoda] >gi|2265149... [more]
gi|1214000628|ref|WP_088713234.1|3.250e-729.76hypothetical protein [Pacificimonas flava] >gi|121... [more]
gi|612389312|ref|XP_007510176.1|4.366e-724.68predicted protein [Bathycoccus prasinos] >gi|41299... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9089rna9089Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications