EWM21647.1, cds9044 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21647.1 vs. NCBI_GenBank
Match: gi|553183160|ref|XP_005853850.1| (hypothetical protein NGA_0345402 [Nannochloropsis gaditana CCMP526] >gi|422295209|gb|EKU22508.1| hypothetical protein NGA_0345402 [Nannochloropsis gaditana CCMP526] >gi|585101902|gb|EWM21647.1| Haloacid dehalogenase-like hydrolase [Nannochloropsis gaditana]) HSP 1 Score: 636.721 bits (1641), Expect = 0.000e+0 Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0
Query: 1 MSRGSTLSLLLIVVSAVALSQAFVSPLSSVYKPATSTQPGQLPHRTVTWLSAGRASRDWALIFDCDGVILESESLHREAYNTVFREFEIDYRWDEEYYDQLQNKVGGGIPKMRYFFGENGWPTSTLGAAPTEEKGRKDMLNALQNRKTDIYKDMIRGGTAQVRPGVLRLIEEARRLGEDRPKLAICSASTKSSCLFVLDNLLKPDVLQHFDLILAGDDVKHRKPDPEIYRLASERLAIPASRSVVIEDSLIGLQAALGAQMPCVITHTASTKAQDFSQARAVFSELGDGNHVQVTARELMEIALGTPL 308
MSRGSTLSLLLIVVSAVALSQAFVSPLSSVYKPATSTQPGQLPHRTVTWLSAGRASRDWALIFDCDGVILESESLHREAYNTVFREFEIDYRWDEEYYDQLQNKVGGGIPKMRYFFGENGWPTSTLGAAPTEEKGRKDMLNALQNRKTDIYKDMIRGGTAQVRPGVLRLIEEARRLGEDRPKLAICSASTKSSCLFVLDNLLKPDVLQHFDLILAGDDVKHRKPDPEIYRLASERLAIPASRSVVIEDSLIGLQAALGAQMPCVITHTASTKAQDFSQARAVFSELGDGNHVQVTARELMEIALGTPL
Sbjct: 1 MSRGSTLSLLLIVVSAVALSQAFVSPLSSVYKPATSTQPGQLPHRTVTWLSAGRASRDWALIFDCDGVILESESLHREAYNTVFREFEIDYRWDEEYYDQLQNKVGGGIPKMRYFFGENGWPTSTLGAAPTEEKGRKDMLNALQNRKTDIYKDMIRGGTAQVRPGVLRLIEEARRLGEDRPKLAICSASTKSSCLFVLDNLLKPDVLQHFDLILAGDDVKHRKPDPEIYRLASERLAIPASRSVVIEDSLIGLQAALGAQMPCVITHTASTKAQDFSQARAVFSELGDGNHVQVTARELMEIALGTPL 308
BLAST of EWM21647.1 vs. NCBI_GenBank
Match: gi|299470552|emb|CBN78540.1| (Haloacid dehalogenase-like hydrolase [Ectocarpus siliculosus]) HSP 1 Score: 345.125 bits (884), Expect = 7.239e-116 Identity = 172/300 (57.33%), Postives = 217/300 (72.33%), Query Frame = 0
Query: 9 LLLIVVSAVALSQAFVSPLSSVYKPATSTQPGQLPHRTVTW-----LSAGRASR-DWALIFDCDGVILESESLHREAYNTVFREFEIDYRWDEEYYDQLQNKVGGGIPKMRYFFGENGWPTSTLGAAPTEEKGRKDMLNALQNRKTDIYKDMIRGGTAQVRPGVLRLIEEARRLGEDRPKLAICSASTKSSCLFVLDNLLKPDVLQHFDLILAGDDVKHRKPDPEIYRLASERLAIPASRSVVIEDSLIGLQAALGAQMPCVITHTASTKAQDFSQARAVFSELGDGNHVQVTARELMEI 302
+ V A SQ FV+P+ S +S++ G P R T L +G +S +WA+IFDCDGVILESESLHREAYN VFREF +DY W EYYD+LQNKVGGG PKMRY+FGENGWP S LGA P ++ + ++++LQ+RKTDIYK+ + GTA +RPGV RLI+E + + K+AICSASTK +CLFVLDNLL + L FDL+LAGDDV RKPDP IY LASE+L +P R +VIEDSLIGL+AALGA+M CVIT+T ST++QDF+ + V+ ELGD QV A EL+++
Sbjct: 5 VFTFAVVAPVFSQGFVAPILST----SSSRDGSAPRRARTSAVSRPLQSGSSSPPEWAVIFDCDGVILESESLHREAYNAVFREFAVDYEWSPEYYDELQNKVGGGKPKMRYYFGENGWPKSKLGAPPETDQEKDLLIDSLQDRKTDIYKEFVANGTAVLRPGVQRLIDETKAISGG--KMAICSASTKDACLFVLDNLLGEENLSKFDLVLAGDDVPRRKPDPMIYALASEKLGVPPERCMVIEDSLIGLEAALGAKMNCVITYTGSTESQDFAGSLGVYPELGDEGSTQVRASELLKL 298
BLAST of EWM21647.1 vs. NCBI_GenBank
Match: gi|873226092|emb|CEM22042.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 327.791 bits (839), Expect = 2.530e-108 Identity = 160/235 (68.09%), Postives = 181/235 (77.02%), Query Frame = 0
Query: 52 AGRASRDWALIFDCDGVILESESLHREAYNTVFREFEIDYRWDEEYYDQLQNKVGGGIPKMRYFFGENGWPTSTLGAAPTEEKGRKDMLNALQNRKTDIYKDMIRGGTAQVRPGVLRLIEEARRLGEDRPKLAICSASTKSSCLFVLDNLLKPDVLQHFDLILAGDDVKHRKPDPEIYRLASERLAIPASRSVVIEDSLIGLQAALGAQMPCVITHTASTKAQDFSQARAVFSEL 286
A +AS +WALIFDCDGVI+ESE LHR+AYN +FREF I Y W EYYD LQN +GGGIPKMR++F ENGWP+STLG P + GR+ ML LQ+RKT IYK I GTAQ RPGVLR++EEA R KLAICSASTKSSCLFVL+NLL D+L FDLILAGDDV HRKP PEIY ASERLAIP SR +VIEDSLIGLQAAL A M CVITHT ST Q F A V++++
Sbjct: 94 ASQASDEWALIFDCDGVIIESEGLHRDAYNAMFREFAIPYEWTPEYYDVLQNMIGGGIPKMRHYFTENGWPSSTLGPPPADTDGREGMLKTLQDRKTIIYKSFISEGTAQPRPGVLRVMEEAMR--TPGTKLAICSASTKSSCLFVLENLLGKDLLSRFDLILAGDDVTHRKPHPEIYHAASERLAIPPSRCLVIEDSLIGLQAALQADMKCVITHTHSTGDQVFDGAEGVYADM 326
BLAST of EWM21647.1 vs. NCBI_GenBank
Match: gi|302845923|ref|XP_002954499.1| (hypothetical protein VOLCADRAFT_109931 [Volvox carteri f. nagariensis] >gi|300260171|gb|EFJ44392.1| hypothetical protein VOLCADRAFT_109931 [Volvox carteri f. nagariensis]) HSP 1 Score: 263.462 bits (672), Expect = 1.264e-83 Identity = 135/251 (53.78%), Postives = 170/251 (67.73%), Query Frame = 0
Query: 60 ALIFDCDGVILESESLHREAYNTVFREFEID-------YRWDEEYYDQLQNKVGGGIPKMRYFFGENGWPTSTL--GAAPTEEKGRKDMLNALQNRKTDIYKDMIRGGTAQVRPGVLRLIEEARRLGEDRPKLAICSASTKSSCLFVLDNLLKPDVLQHFDLILAGDDVKHRKPDPEIYRLASERLAIPASRSVVIEDSLIGLQAALGAQMPCVITHTASTKAQDFSQARAVFSELGDGNHVQVTARELME 301
ALIFDCDGVILESE LHR AYN F+ F++ WDE +YD LQN VGGG PKMR+FF NGWPTS++ G P E+ + +++ LQ+ KT+ Y+ MI G + RPGVLRL++EAR G KLA+CSA+TKSS +F L NLL Q D LAGDDV +KPDP+IY++A+ERL + + VV+EDS+IGLQAA GA M C+IT+T STK+Q F A + ELG G VT +ELME
Sbjct: 43 ALIFDCDGVILESEDLHRRAYNATFKHFKVKCGGEQGYVDWDESFYDMLQNTVGGGKPKMRWFFKRNGWPTSSVLDGRVPASEEEQARLVDTLQDWKTEKYQQMIGSGEVEPRPGVLRLMDEARAAG---LKLAVCSAATKSSVVFTLKNLLGEGRFQGLDCFLAGDDVDKKKPDPKIYKVAAERLGLDPAECVVVEDSMIGLQAATGAGMRCIITYTPSTKSQAFPGAERIVCELG-GYPAMVTVKELME 289
BLAST of EWM21647.1 vs. NCBI_GenBank
Match: gi|1004144565|gb|KXZ52545.1| (hypothetical protein GPECTOR_9g589 [Gonium pectorale]) HSP 1 Score: 259.996 bits (663), Expect = 8.935e-83 Identity = 132/251 (52.59%), Postives = 170/251 (67.73%), Query Frame = 0
Query: 60 ALIFDCDGVILESESLHREAYNTVFREFEID-------YRWDEEYYDQLQNKVGGGIPKMRYFFGENGWPTSTL--GAAPTEEKGRKDMLNALQNRKTDIYKDMIRGGTAQVRPGVLRLIEEARRLGEDRPKLAICSASTKSSCLFVLDNLLKPDVLQHFDLILAGDDVKHRKPDPEIYRLASERLAIPASRSVVIEDSLIGLQAALGAQMPCVITHTASTKAQDFSQARAVFSELGDGNHVQVTARELME 301
ALIFDCDGVILESE LHR AYN F++F++ WDE +YD LQN VGGG PKMR++F +GWPTS++ G P E+ + +++ LQ+ KTD Y+ MI G + RPGVLRL++EAR G KLA+CSA+TKSS +F L NLL + D LAGDDV +KPDP+IY++A+ERL + VV+EDS+IGLQAA GA M C+IT+T STK+Q F A + +LG G VT +ELME
Sbjct: 3 ALIFDCDGVILESEDLHRRAYNATFKQFQVKCGGEQGYVDWDESFYDMLQNTVGGGKPKMRWYFKRSGWPTSSVLGGRVPATEQEQDLLIDTLQDWKTDKYQQMIGDGEVEARPGVLRLMDEARAAG---LKLAVCSAATKSSVVFTLKNLLGQGRFEGLDCFLAGDDVDKKKPDPKIYKVAAERLGVSPGECVVVEDSMIGLQAATGAGMRCIITYTPSTKSQAFPGAERIVCDLG-GYPATVTVKELME 249
BLAST of EWM21647.1 vs. NCBI_GenBank
Match: gi|1026773160|gb|OAE32445.1| (hypothetical protein AXG93_3218s1170 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 262.692 bits (670), Expect = 9.097e-83 Identity = 133/254 (52.36%), Postives = 174/254 (68.50%), Query Frame = 0
Query: 60 ALIFDCDGVILESESLHREAYNTVFREFEID-----YRWDEEYYDQLQNKVGGGIPKMRYFFGENGWPTSTL-GAAPTEEKGRKDMLNALQNRKTDIYKDMIRGGTAQVRPGVLRLIEEARRLGEDRPKLAICSASTKSSCLFVLDNLLKPDVLQHFDLILAGDDVKHRKPDPEIYRLASERLAIPASRSVVIEDSLIGLQAALGAQMPCVITHTASTKAQDFSQARAVFSELGDGNHVQVTARELMEIALGTP 307
ALIFDCDGVILESE LHR AYN F F + WD E+YD LQN +GGG PKMR++F NGWPTS+L AP E + ++++LQ+ KT+ YKD+IR G A+ RPGVL L++EAR +G KLA+CSA+TKSS +F L NLL + + D LAGDDVK++KPDP IY++A+E+L R +V+EDS+IGLQAALGA M CVI++T+ST QDF+ A A + LG V+ EL+++ P
Sbjct: 98 ALIFDCDGVILESEDLHRRAYNLTFEHFNVKCGSKLVDWDTEFYDVLQNTIGGGKPKMRWYFARNGWPTSSLFETAPESEADQSTLIDSLQDWKTEKYKDLIRSG-AEPRPGVLELMDEARSMG---IKLAVCSAATKSSVVFCLTNLLGKERFEQLDCFLAGDDVKNKKPDPSIYKVAAEKLGANPGRCLVVEDSVIGLQAALGAGMTCVISYTSSTSKQDFAGASASYPNLGG-----VSLTELIKVVDSAP 342
BLAST of EWM21647.1 vs. NCBI_GenBank
Match: gi|302816258|ref|XP_002989808.1| (hypothetical protein SELMODRAFT_447828 [Selaginella moellendorffii] >gi|300142374|gb|EFJ09075.1| hypothetical protein SELMODRAFT_447828 [Selaginella moellendorffii]) HSP 1 Score: 262.692 bits (670), Expect = 2.121e-82 Identity = 131/258 (50.78%), Postives = 177/258 (68.60%), Query Frame = 0
Query: 40 GQLPHRTVTW-LSAG---RASRDWALIFDCDGVILESESLHREAYNTVFREFEID-------YRWDEEYYDQLQNKVGGGIPKMRYFFGENGWPTSTLGAAPTEEKGRKDMLNALQNRKTDIYKDMIRGGTAQVRPGVLRLIEEARRLGEDRPKLAICSASTKSSCLFVLDNLLKPDVLQHFDLILAGDDVKHRKPDPEIYRLASERLAIPASRSVVIEDSLIGLQAALGAQMPCVITHTASTKAQDFSQARAVFSEL 286
G+ + W L AG RAS D AL+FDCDGVILESE LHR AYN F FE+ W E+YD+LQN++GGG PKMR++F NGWP+S+L ++ ++ + +++ LQ+ KT+ YKD+I G + RPGVLRL++EAR +G K+A+CSA+TKSS +F L NLL + Q D LAGDDV+ +KP+P IY++A E+L + +VIEDS+IGL+AA+GA M CV+T T+ST QDFS+A AVFS L
Sbjct: 106 GRARQKRAAWNLRAGCGVRASLD-ALVFDCDGVILESEDLHRRAYNATFENFEVRCPGNKSPVVWSTEFYDELQNQIGGGKPKMRWYFNRNGWPSSSLYSSLKDDDAKAQLIDTLQDWKTNKYKDIIASGAVEPRPGVLRLMDEARDMG---IKVAVCSAATKSSVVFCLTNLLGKERFQQLDCFLAGDDVEEKKPNPMIYKVAVEKLGATPDKCIVIEDSVIGLKAAVGAGMKCVVTFTSSTSKQDFSEAAAVFSSL 359
BLAST of EWM21647.1 vs. NCBI_GenBank
Match: gi|922434014|ref|XP_013623079.1| (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 [Brassica oleracea var. oleracea] >gi|923905288|ref|XP_013722743.1| PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 [Brassica napus]) HSP 1 Score: 258.07 bits (658), Expect = 1.685e-81 Identity = 126/238 (52.94%), Postives = 170/238 (71.43%), Query Frame = 0
Query: 60 ALIFDCDGVILESESLHREAYNTVFREFEI--------DYRWDEEYYDQLQNKVGGGIPKMRYFFGENGWPTSTLGAAPTE-EKGRKDMLNALQNRKTDIYKDMIRGGTAQVRPGVLRLIEEARRLGEDRPKLAICSASTKSSCLFVLDNLLKPDVLQHFDLILAGDDVKHRKPDPEIYRLASERLAIPASRSVVIEDSLIGLQAALGAQMPCVITHTASTKAQDFSQARAVFSELGD 288
ALIFDCDGVILESE+LHR+AYN F F++ W E+YD+ QN VGGG PKMR++F ENGWPTSTL +P E + GR +++ LQ+ KT+ YK++I+ G+ + RPGV+RL++EAR G+ KLA+CSA+TKSS + L+NL++ + Q D LAGDDVK +KPDP IY A+E+L + + +VIEDS+IGLQAA A M CVIT+T+ST QDF +A AV+ +L +
Sbjct: 56 ALIFDCDGVILESENLHRQAYNDAFAHFDVRCPPSSSESLNWSLEFYDKFQNLVGGGKPKMRWYFRENGWPTSTLFDSPPESDDGRAKLIDTLQDWKTERYKEIIKSGSVEARPGVIRLMDEARAAGK---KLAVCSAATKSSVILCLENLIQIERFQGLDCFLAGDDVKEKKPDPSIYITAAEKLGVSVNDCLVIEDSVIGLQAATKAGMSCVITYTSSTSDQDFKEAIAVYPDLTN 290
BLAST of EWM21647.1 vs. NCBI_GenBank
Match: gi|116791022|gb|ABK25826.1| (unknown [Picea sitchensis]) HSP 1 Score: 258.07 bits (658), Expect = 2.996e-81 Identity = 126/236 (53.39%), Postives = 165/236 (69.92%), Query Frame = 0
Query: 61 LIFDCDGVILESESLHREAYNTVFREFEI-------DYRWDEEYYDQLQNKVGGGIPKMRYFFGENGWPTSTL-GAAPTEEKGRKDMLNALQNRKTDIYKDMIRGGTAQVRPGVLRLIEEARRLGEDRPKLAICSASTKSSCLFVLDNLLKPDVLQHFDLILAGDDVKHRKPDPEIYRLASERLAIPASRSVVIEDSLIGLQAALGAQMPCVITHTASTKAQDFSQARAVFSELGD 288
LIFDCDGVILESE LHR AYN F +F + WD E+YDQLQN++GGG PKMR++F ENGWP+ST+ P E + +++ LQ KT+ YKD+IR GT + RPGVL+L++E R G KLA+CSA+TKSS + L+NLL + Q D LAGDDVK +KPDP IY A++RL A +V+EDS+IGLQAA+GA M CVI++T+STK QDF A+A++ +L +
Sbjct: 83 LIFDCDGVILESEHLHRNAYNATFTQFNVCCPSSSKPVDWDAEFYDQLQNQIGGGKPKMRWYFNENGWPSSTIFETPPANETDQVKLIDILQEWKTEKYKDIIRSGTVKPRPGVLQLMDETRAAG---IKLAVCSAATKSSVILCLENLLGLERFQQLDCFLAGDDVKKKKPDPSIYLEAAKRLGKSAKNCLVVEDSVIGLQAAIGAGMACVISYTSSTKDQDFKGAKAIYPDLSN 315
BLAST of EWM21647.1 vs. NCBI_GenBank
Match: gi|470105886|ref|XP_004289309.1| (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 [Fragaria vesca subsp. vesca]) HSP 1 Score: 256.529 bits (654), Expect = 6.306e-81 Identity = 125/236 (52.97%), Postives = 170/236 (72.03%), Query Frame = 0
Query: 60 ALIFDCDGVILESESLHREAYNTVFREFEIDYR------WDEEYYDQLQNKVGGGIPKMRYFFGENGWPTSTLGAAPTEE-KGRKDMLNALQNRKTDIYKDMIRGGTAQVRPGVLRLIEEARRLGEDRPKLAICSASTKSSCLFVLDNLLKPDVLQHFDLILAGDDVKHRKPDPEIYRLASERLAIPASRSVVIEDSLIGLQAALGAQMPCVITHTASTKAQDFSQARAVFSELGD 288
ALIFDCDGVILESE LHR+AYN F F + WD ++YDQLQN++GGG PKMR++F ENGWP+ST+ P E+ +GR +++ LQ+ KT+ YK++I+ GT + RPGVLRL++EA+ G+ KLA+CSA+TKSS + L++L+ + Q D LAGDDVK +KPDP IY A++RL I AS +V+EDS+IGLQAA A M CVI++T+ST QDF A A++ +L +
Sbjct: 53 ALIFDCDGVILESEHLHRQAYNDAFAHFNVRCSSSQPLVWDPDFYDQLQNQIGGGKPKMRWYFKENGWPSSTIFEKPPEDDEGRAKIIDTLQDWKTERYKEIIKSGTVEPRPGVLRLMDEAKAAGK---KLAVCSAATKSSVILCLESLIGNERFQGLDCFLAGDDVKEKKPDPSIYLTAAKRLGISASDCLVVEDSVIGLQAATKAGMSCVISYTSSTADQDFKDAIAIYPDLSN 285 The following BLAST results are available for this feature:
BLAST of EWM21647.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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