EWM21562.1, cds9027 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21562.1 vs. NCBI_GenBank
Match: gi|585101817|gb|EWM21562.1| (hypothetical protein Naga_100012g9 [Nannochloropsis gaditana]) HSP 1 Score: 639.802 bits (1649), Expect = 0.000e+0 Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0
Query: 1 MKLTSPSAVIAGVVFFLSCKHLLTSAWIGPFATAPSASLPRDPPPVVICPGFGNDQIDYLNPMNLGEEAGMVQALRRRGFPVYVVPVKRTDWLKFANGLFTPSFWSQTMTPRDLSFGWYLNKVVQTVERAASEHPGRKALVVGHSAGGWLARAALGDGAWTGKAAKEVRDLVQGCVTLGTPHLPPAPPGVCVTRGALGHVHLNYPGAFLKPQGLFYMTVAGVAVEGRREPQGAGRRERRGGSIEDFAFRSYVQVCGRGDVVGDGVVPLEAAHLEGAKQVNLQNVFHSINAPKAWYGSEEVIDSWLGEVEGIRY 313
MKLTSPSAVIAGVVFFLSCKHLLTSAWIGPFATAPSASLPRDPPPVVICPGFGNDQIDYLNPMNLGEEAGMVQALRRRGFPVYVVPVKRTDWLKFANGLFTPSFWSQTMTPRDLSFGWYLNKVVQTVERAASEHPGRKALVVGHSAGGWLARAALGDGAWTGKAAKEVRDLVQGCVTLGTPHLPPAPPGVCVTRGALGHVHLNYPGAFLKPQGLFYMTVAGVAVEGRREPQGAGRRERRGGSIEDFAFRSYVQVCGRGDVVGDGVVPLEAAHLEGAKQVNLQNVFHSINAPKAWYGSEEVIDSWLGEVEGIRY
Sbjct: 1 MKLTSPSAVIAGVVFFLSCKHLLTSAWIGPFATAPSASLPRDPPPVVICPGFGNDQIDYLNPMNLGEEAGMVQALRRRGFPVYVVPVKRTDWLKFANGLFTPSFWSQTMTPRDLSFGWYLNKVVQTVERAASEHPGRKALVVGHSAGGWLARAALGDGAWTGKAAKEVRDLVQGCVTLGTPHLPPAPPGVCVTRGALGHVHLNYPGAFLKPQGLFYMTVAGVAVEGRREPQGAGRRERRGGSIEDFAFRSYVQVCGRGDVVGDGVVPLEAAHLEGAKQVNLQNVFHSINAPKAWYGSEEVIDSWLGEVEGIRY 313
BLAST of EWM21562.1 vs. NCBI_GenBank
Match: gi|298709578|emb|CBJ31404.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 251.136 bits (640), Expect = 5.595e-79 Identity = 135/264 (51.14%), Postives = 165/264 (62.50%), Query Frame = 0
Query: 45 PVVICPGFGNDQIDYLNPMNLGEEAGMVQALRRRGFPVYVVPVKRTDWLKFANGLFTPSFWSQTMTPRDLSFGWYLNKVVQTVERAASEHPGRKALVVGHSAGGWLARAALGDGAWTGKAAKEVRDLVQGCVTLGTPHLPPAPPGVCVTRGALGHVHLNYPGAFLKPQGLFYMTVAGVAVEGRREPQGAGRRERRGGSIEDFAFRSYVQVCGRGDVVGDGVVPLEAAHLEGAKQVNLQNVFHSINAPKAWYGSEEVIDSWLGEV 308
PVVI PGFGND DY NP++ GE+ AL RRG +VVPV+R+DWLK A+ + T FW T P ++ WYL KV +TV + E K L+VGHSAGGWLARA L +G W A E D+V G VTLG+PH A P + +TRGAL YPGAFLK +G+FY+TV G A+ G ++ A RR R FA+ SY VCG G +GD VPL AHLEGA+QV L VFHS++ P WYGSE V+D WL V
Sbjct: 10 PVVILPGFGNDARDYTNPLDGGEDKAFASALERRGLKTFVVPVERSDWLKVASAVLTLDFWKGTCRPDGPAYSWYLQKVKETVRTSLEETGADKVLLVGHSAGGWLARATLAEGVWEEGVASE--DVVAGLVTLGSPHF--AGP-MDMTRGALTFTSDEYPGAFLKDRGIFYVTVGGAALLGEKD---APRRSR-----ARFAYGSYQTVCGEGGTMGDSCVPLVYAHLEGAEQVTLDGVFHSVDKPDEWYGSEGVVDRWLATV 260
BLAST of EWM21562.1 vs. NCBI_GenBank
Match: gi|224000541|ref|XP_002289943.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220975151|gb|EED93480.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 237.269 bits (604), Expect = 2.942e-72 Identity = 136/292 (46.58%), Postives = 179/292 (61.30%), Query Frame = 0
Query: 45 PVVICPGFGNDQIDYLNPMNLGEEAGMVQALRRRGFP---VYVVPVKRTDWLKFANGLF-TPSFWSQTMTPRDLSFGWYLNKVVQTVERAASEHPGRKALVVGHSAGGWLARAALGDGAWTGKAAKEVRDLVQGCVTLGTPHLPPA--PPGVCVTRGALGHVHLNYPGAFLKPQGLFYMTVAGVAVEGRREPQGAGR--------RER----------RG-GSIEDFAFRSYVQVCGRGDVVGDGVVPLEAAHLEGAKQVNLQNVFHSINA------PKAWYGSEEVIDSWL 305
PVVICPGFG+DQIDY NP+ G E G V AL RRGF + V+P++R +W++ A GLF P+F++ P L +GWY+N++ T+E A + G K L+VGHSAGGWLARAALGDG+W A+ D V+ +T+G H PPA CVTRGAL ++ YPGA+L +G+ Y++V G AV G ++PQ + +ER RG GS A+ SY V G+G++ GDGVVPLE A LEG++ + L+ V HSIN WYGSE VID WL
Sbjct: 64 PVVICPGFGSDQIDYQNPLEQGTEKGFVTALVRRGFNPDLIKVMPLERYEWIRVAGGLFDIPNFYTGNCRPDGLGYGWYVNRLRNTIEEAYNLSGGEKVLMVGHSAGGWLARAALGDGSWIRSEARAA-DRVRALITVGAIHKPPAGDAASSCVTRGALAYLDEMYPGAYLAEEGIRYVSVGGDAVVG-KQPQKNQQLLSSNDEMKERSEEVNDVYKVRGEGSASSVAYTSYTAVSGKGEITGDGVVPLEWALLEGSRTIVLEGVLHSINEAGTTLPTDRWYGSEGVIDRWL 353
BLAST of EWM21562.1 vs. NCBI_GenBank
Match: gi|1072229396|gb|OEU14131.1| (hypothetical protein FRACYDRAFT_189007 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 233.802 bits (595), Expect = 2.068e-71 Identity = 131/289 (45.33%), Postives = 171/289 (59.17%), Query Frame = 0
Query: 45 PVVICPGFGNDQIDYLNPMNLGEEAGMVQALRRRGFP---VYVVPVKRTDWLKFANGLF-TPSFWSQTMTPRDLSFGWYLNKVVQTVERAASEHPGRKALVVGHSAGGWLARAALGDGAWT----------GKAAKE-----VRDLVQGCVTLGTPHLPPAPPGVCVTRGALGHVHLNYPGAFLKPQGLFYMTVAGVAVEGRREPQGAGRRERRG-GSIEDFAFRSYVQVC--GRGDVVGDGVVPLEAAHLEGAKQVNLQNVFHSINA------PKAWYGSEEVIDSWL 305
PVVICPGFGND IDY P+ + G+ L RRGF +Y VPVKR+DW++ A GLF P F+ T P +GWY+ ++ + V+ A E G K +++GHSAGGWLARAALGDG+W+ G++A E D V+ VT+G+ H+ P CVTRGAL + NYPGAFLK +G+ Y++V G + + +RRG G+ AF SY V G G+++GDGVVPL LEG+KQ+ LQNV HSIN WYGSE V+D WL
Sbjct: 34 PVVICPGFGNDSIDYDTPLQQPSDVGLKSVLTRRGFDSSQIYTVPVKRSDWVRVAGGLFDVPDFYLGTAKPTGFGYGWYVRRLKEIVDLAYEESGGEKVMLIGHSAGGWLARAALGDGSWSEDNSNNKDDDGESAGEKEVIRTSDRVRCLVTIGSIHMVPEQESTCVTRGALKYTDANYPGAFLKNEGIGYVSVDGELLISEVDDL----YKRRGEGNANRVAFSSYKAVAGNGNGNLIGDGVVPLPWTQLEGSKQIVLQNVLHSINEAGTTQPTDRWYGSENVVDRWL 318
BLAST of EWM21562.1 vs. NCBI_GenBank
Match: gi|873226549|emb|CEM20650.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 234.187 bits (596), Expect = 8.266e-71 Identity = 133/279 (47.67%), Postives = 177/279 (63.44%), Query Frame = 0
Query: 45 PVVICPGFGNDQIDYLNPMNLGEEAGMVQALRRRGFPVYVVPVKRTDWLKFANGLFTPSFWSQTMTPRDLSFGWYLNKVVQTVERAASEH-PGR----KALVVGHSAGGWLARAALGDGAWTGKAAKE--------VRDLVQGCVTLGTPHLPPAPPGVCVTRGALGHVHLNYPGAFLKPQGLFYMTVAGVAVEGRREPQGAGRRERRGGSIEDFAFRSYVQVCGRGD-VVGDGVVPLEAAHLEGAKQVNLQNVFHSINAPKAWYGSEEVIDSWLGEVE 309
P+VI PGFGND +DY NPM +GE+ + AL RRG+ VYVVP+ R +WL A T FW+ P F WYL++V TV+R PG K ++VGHSAGGWLARA +GDG W + +E +D+VQG ++LG+PH PP PP + +TRG L +V YPG F K +G+FY++V G AV G + A R G++E FAF+SY VCG GD V GDGVVPL +A+L+G++ V + V+HSIN P +WYGSE V+D+WL +
Sbjct: 91 PIVILPGFGNDALDYTNPMKMGEDTSLKAALERRGYNVYVVPIARREWLSVARDFLTRRFWTGECRPDGPGFRWYLDRVRTTVDRVRRRDWPGGALPPKVVLVGHSAGGWLARAVMGDGTWRNETDEETGESTVEYTQDIVQGVISLGSPHYPPPPPALDMTRGVLTYVCREYPGTFHKEKGIFYVSVVGDAVTGDVQ---ADR-----GTLERFAFQSYEVVCGSGDGVRGDGVVPLRSAYLDGSRCVTMSGVYHSINVPDSWYGSENVVDTWLAAAQ 361
BLAST of EWM21562.1 vs. NCBI_GenBank
Match: gi|551660050|ref|XP_005832793.1| (hypothetical protein GUITHDRAFT_86917 [Guillardia theta CCMP2712] >gi|428176931|gb|EKX45813.1| hypothetical protein GUITHDRAFT_86917 [Guillardia theta CCMP2712]) HSP 1 Score: 219.935 bits (559), Expect = 6.676e-66 Identity = 128/294 (43.54%), Postives = 174/294 (59.18%), Query Frame = 0
Query: 29 GPFATAPSASLPRDPPP--VVICPGFGNDQIDYLNPMNLGEEAGMVQALRRRGFPVYVVPVKRTDWLKFANGLFTPSFWSQTMTPRDLSFGWYLNKVVQTVERAASEHPGRKALVVGHSAGGWLARAALGDGAWTGKAAK-EVRDLVQGCVTLGTPHLPPAPPG---VCVTRGALGHVHLNYPGAFLKPQGLFYMTVAGVAVEGRREPQGAGRRERRGGSIEDFAFRSYVQVCGRGDVVGDGVVPLEAAHLEGAKQVNLQNVFHSINAPK--------AWYGSEEVIDSWLGEV 308
G + +PS+SL P VVI PGFGN Q DY++P G E + AL +RG V V+P+KR WL G+FT SFW +P + +GWY+N + + RA +V+GHSAGGWL RA LGDG W + K + D++ V+LGTPH PP+ + +TRGAL H N PGAFL P+ + Y+TV + G +E G R GS+ A+ SY VCG G V+GDGVVPL+++HLEG+ QV+L+ +HSI++P+ WYGS+ +IDSWL V
Sbjct: 53 GTRSCSPSSSLRACMPSHRVVILPGFGNAQEDYIDPFGCGFEQSITCALEKRGHQVQVMPLKRAQWLNVLWGIFTLSFWLGKSSPYEPGYGWYVNMARREISRAYEASNKTPVVVIGHSAGGWLGRAVLGDGTWRDEDTKTRIVDMISCFVSLGTPHSPPSSNAKDIMDMTRGALTWTHENLPGAFLAPR-VPYVTVGSDLIPGDKE----GAR----GSLGRSAYESYRLVCGEGSVLGDGVVPLQSSHLEGSTQVDLK-CYHSISSPRMPEYEIRSTWYGSDSLIDSWLNVV 336
BLAST of EWM21562.1 vs. NCBI_GenBank
Match: gi|397625348|gb|EJK67758.1| (hypothetical protein THAOC_11171 [Thalassiosira oceanica]) HSP 1 Score: 223.787 bits (569), Expect = 1.991e-64 Identity = 128/301 (42.52%), Postives = 168/301 (55.81%), Query Frame = 0
Query: 45 PVVICPGFGNDQIDYLNPMNLGEEAGMVQALRRRGFP---VYVVPVKRTDWLKFANGLFTPSFWSQTMTPRDLSFGWYLNKVVQTVERAASEHPGRKALVVGHSAGGWLARAALGDGAWTGKAA------KEVR--DLVQGCVTLGTPHLPPAPPGVCVTRGALGHVHLNYPGAFLKPQGLFYMTVAGVAVEGRREPQGA-------------GRRERRGGSIEDFAFRSYVQVCGRGDVVGDGVVPLEAAHLEGAKQVNLQNVFHSINA------PKAWYGSEEVIDSWLG---EVEGIR 312
PVV+CPGFGND IDY NP+ G E G V AL +RGF + V+P+KR +W + A GL F+ T P L +GWY+ ++ QT++ A + G + +++GHSAGGWL RAALGDG+W + + VR D V+ T+G H P CVTRG L V YPGAFL +G+ Y++V G AV GR + + R R GS A+ SY V G G + GDGVVPLE L+G+KQ+ L +V HSIN WYGS++V+D WL E GIR
Sbjct: 54 PVVVCPGFGNDAIDYSNPLEQGREKGFVTALVKRGFDPELISVLPLKRYEWARVAGGLLELDFYLGTAKPTGLGYGWYVRRLRQTIQEAYEKAGGERVVLIGHSAGGWLGRAALGDGSWDVDSDDTTDSNERVRSSDRVRALFTIGAIHQTPQDESTCVTRGVLKTVAELYPGAFLASEGITYVSVGGDAVVGRPKVEAGEDDAKLGSPESNEAYRARGEGSAASVAYTSYSAVSGDGLMTGDGVVPLEWTLLDGSKQIVLDDVVHSINEAGTTIPTDKWYGSDKVVDRWLNDALEEAGIR 354
BLAST of EWM21562.1 vs. NCBI_GenBank
Match: gi|551622619|ref|XP_005791638.1| (hypothetical protein EMIHUDRAFT_223702 [Emiliania huxleyi CCMP1516] >gi|485645596|gb|EOD39209.1| hypothetical protein EMIHUDRAFT_223702 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 213.772 bits (543), Expect = 6.394e-64 Identity = 123/288 (42.71%), Postives = 162/288 (56.25%), Query Frame = 0
Query: 36 SASLPRDPPPVVICPGFGNDQIDYLNPMNLGEEAGMVQALRRRGF-PVYVVPVKRTDWLKFANGLFTPSFWSQTMTPRDLSFGWYLNKVVQTVERAASEHPGRKALVVGHSAGGWLARAALGDGAWTGKAAKEVRDLVQGCVTLGTPHLPPAPPGVCVTRGALGHVHLNYPGAFLKPQGLFYMTVAGVAVEGR----REPQGAGRRE----RRGGSIEDFAFRSYVQVCGRGDVVGDGVVPLEAAHLEGAKQVNLQNVFHSINA------PKAWYGSEEVIDSWLGEV 308
S+++ + PVVI PGFGN IDY P+ + G+ L RRGF V +P +R +W + GL W TP ++ W+++++ VE A ++ G+K L++ HSAGGWL+RAAL DG A +LV G VTLG PH PP +T+G + V+ +YPGAFL +G+ Y+TV G A+ G + P A R GS AF SY+ CGRGDV GDGVVPLE LEGA+QV L V HSIN WYGSE+V+D WLG V
Sbjct: 12 SSAMALEDSPVVIVPGFGNADIDYKTPLGQDADVGLESVLARRGFTDVRTMPCERVEWARVILGLLAAIVWRPWATPEGPAYSWFIDRLRGAVEEAHAQSGGKKVLLIAHSAGGWLSRAALSDGGAWRGGAAAPAELVSGLVTLGAPHFPPPEGTPDMTQGVIRAVNDDYPGAFLAREGIAYVTVGGDAIVGDDSKAQSPAAASVDNVYAMRGEGSAARVAFNSYLMTCGRGDVTGDGVVPLEWTLLEGARQVVLPGVLHSINEAGTTLPTDRWYGSEQVVDRWLGAV 299
BLAST of EWM21562.1 vs. NCBI_GenBank
Match: gi|551555149|ref|XP_005764771.1| (hypothetical protein EMIHUDRAFT_213548 [Emiliania huxleyi CCMP1516] >gi|485614560|gb|EOD12342.1| hypothetical protein EMIHUDRAFT_213548 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 214.157 bits (544), Expect = 6.546e-64 Identity = 125/291 (42.96%), Postives = 163/291 (56.01%), Query Frame = 0
Query: 33 TAPSASLPRDPPPVVICPGFGNDQIDYLNPMNLGEEAGMVQALRRRGFP-VYVVPVKRTDWLKFANGLFTPSFWSQTMTPRDLSFGWYLNKVVQTVERAASEHPGRKALVVGHSAGGWLARAALGDGAWTGKAAKEVRDLVQGCVTLGTPHLPPAPPGVCVTRGALGHVHLNYPGAFLKPQGLFYMTVAGVAVEGR----REPQGAGRRE----RRGGSIEDFAFRSYVQVCGRGDVVGDGVVPLEAAHLEGAKQVNLQNVFHSINA------PKAWYGSEEVIDSWLGEV 308
T +A++ + PVVI PGFGN IDY P+ + G+ L RRGF V +P +R +W + GL W TP ++ W+++++ VE A ++ G+K L+V HSAGGWL+RAAL DG A +LV G VTLG PH PP +T+G + V+ +YPGAFL +G+ Y+TV G A+ G + P A R GS AF SY+ CGRGDV GDGVVPLE LEGA+QV L V HSIN WYGSE+V+D WLG V
Sbjct: 23 TRSAAAMALEDSPVVIVPGFGNADIDYKTPLGQDADVGLESVLARRGFTDVRTMPCERVEWARVILGLLAAIVWRPWATPEGPAYSWFIDRLRGAVEEAHAQSGGKKVLLVAHSAGGWLSRAALSDGGAWRGGAAAPAELVSGLVTLGAPHFPPPEGTPDMTQGVIRAVNDDYPGAFLAREGIAYVTVGGDAIVGDDSKAQSPAAASVDNVYAMRGEGSAARVAFNSYLMTCGRGDVTGDGVVPLEWTLLEGARQVVLPGVLHSINEAGTTLPTDRWYGSEQVVDRWLGAV 313
BLAST of EWM21562.1 vs. NCBI_GenBank
Match: gi|219116971|ref|XP_002179280.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409171|gb|EEC49103.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 201.83 bits (512), Expect = 2.640e-59 Identity = 113/270 (41.85%), Postives = 158/270 (58.52%), Query Frame = 0
Query: 46 VVICPGFGNDQIDYLNPMNLGEEAGMVQALRRRGF---PVYVVPVKRTDWLK-FANGLFTPSFWSQTMTPRDLSFGWYLNKVVQTVERAASEHPGRKALVVGHSAGGWLARAALGDGAWTGKAAKEVRDL-------VQGCVTLGTPHLPPAPPGVCVTRGALGHVHLNYPGAFLKPQGLFYMTVAGVAVEGRREPQGAGRRERRGGSIEDFAFRSYVQVCGRGDVVGDGVVPLEAAHLEGAKQVNLQNVFHSINAPKAWYGSEEVIDSW 304
+V+ PGFGN+ DY P + +V++L+ RG+ + V+P++R DWL+ F NGLF FW+ M SF WYL V + E K ++V HSAGGWLARAALG + +A + +D+ V G VTLG PH+PP P + +TRGAL + ++PGA+ GLFY+TV G A+ G ++ + R + AF SY VCG G +GDG++P +AHL+ A Q+NL VFHSINAP WYGS+ ++D W
Sbjct: 28 LVVLPGFGNNSNDYFLPE--APQGSLVRSLQNRGWRDDQIRVLPMERLDWLQVFVNGLFDLRFWTSNMAATCPSFRWYLKCVAGEIAEICEESSDTKVVLVCHSAGGWLARAALG---YFSQAQADEQDVPRIELERVLGMVTLGAPHIPPPPEVMDMTRGALRITNEDFPGAYHIDDGLFYITVVGNAIAGIKDQR---RSPFERTTPTGLAFNSYEAVCGAGTSMGDGLIPRMSAHLDDAIQINLDGVFHSINAPDKWYGSDSLLDRW 289 The following BLAST results are available for this feature:
BLAST of EWM21562.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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