EWM21590.1, cds9025 (CDS) Nannochloropsis gaditana

Overview
NameEWM21590.1
Unique Namecds9025
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:225168..225329 +
Alignment locationKK037251.1:225378..225406 +
Alignment locationKK037251.1:225639..225948 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21590.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100012g7.1922.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:225168..225329 +
KK037251.1supercontigKK037251.1:225378..225406 +
KK037251.1supercontigKK037251.1:225639..225948 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21590.1 vs. NCBI_GenBank
Match: gi|585101845|gb|EWM21590.1| (hypothetical protein Naga_100012g7 [Nannochloropsis gaditana])

HSP 1 Score: 336.265 bits (861), Expect = 7.245e-117
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0 
Query:    1 MPACLDREGDGHGGNQDVVEMRADGDWDVEESDDAFFALGLLSPVAAGRAAAETEGIELSKRKRGNGSDLKGRGASRQKTKRTVRSFWRETSLSNPATNSTLSGKKEYRSLFFHSRRSCLTKFGGMCVGTGESPRVVSTYSAERVSEGWGSARASKRETVERNGGT 166
            MPACLDREGDGHGGNQDVVEMRADGDWDVEESDDAFFALGLLSPVAAGRAAAETEGIELSKRKRGNGSDLKGRGASRQKTKRTVRSFWRETSLSNPATNSTLSGKKEYRSLFFHSRRSCLTKFGGMCVGTGESPRVVSTYSAERVSEGWGSARASKRETVERNGGT
Sbjct:    1 MPACLDREGDGHGGNQDVVEMRADGDWDVEESDDAFFALGLLSPVAAGRAAAETEGIELSKRKRGNGSDLKGRGASRQKTKRTVRSFWRETSLSNPATNSTLSGKKEYRSLFFHSRRSCLTKFGGMCVGTGESPRVVSTYSAERVSEGWGSARASKRETVERNGGT 166
The following BLAST results are available for this feature:
BLAST of EWM21590.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101845|gb|EWM21590.1|7.245e-117100.00hypothetical protein Naga_100012g7 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9055rna9055Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications