EWM21654.1, cds9019 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21654.1 vs. NCBI_GenBank
Match: gi|585101910|gb|EWM21654.1| (lysyl-trna synthetase [Nannochloropsis gaditana]) HSP 1 Score: 286.96 bits (733), Expect = 4.399e-98 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
Query: 1 MAYADYHDLMDLTETLFSEMVKEITGGYVIKYHPEGPGGSELTIDFSPPWKRIPMVEGLEEKLKVKLPPLDTEAAREVLEGLCQKHDVACSAPRTVPRLLDKLVGEFLEEDIISPAFITEHPEIMSPLAKSHRTKPGLTER 141
MAYADYHDLMDLTETLFSEMVKEITGGYVIKYHPEGPGGSELTIDFSPPWKRIPMVEGLEEKLKVKLPPLDTEAAREVLEGLCQKHDVACSAPRTVPRLLDKLVGEFLEEDIISPAFITEHPEIMSPLAKSHRTKPGLTER
Sbjct: 1 MAYADYHDLMDLTETLFSEMVKEITGGYVIKYHPEGPGGSELTIDFSPPWKRIPMVEGLEEKLKVKLPPLDTEAAREVLEGLCQKHDVACSAPRTVPRLLDKLVGEFLEEDIISPAFITEHPEIMSPLAKSHRTKPGLTER 141
BLAST of EWM21654.1 vs. NCBI_GenBank
Match: gi|1174749488|gb|OQV17721.1| (Lysine--tRNA ligase [Hypsibius dujardini]) HSP 1 Score: 197.978 bits (502), Expect = 9.442e-58 Identity = 96/144 (66.67%), Postives = 112/144 (77.78%), Query Frame = 0
Query: 1 MAYADYHDLMDLTETLFSEMVKEITGGYVIKYHPEGPGGSELTIDFSPPWKRIPMVEGLEEKLKVKLPPLD---TEAAREVLEGLCQKHDVACSAPRTVPRLLDKLVGEFLEEDIISPAFITEHPEIMSPLAKSHRTKPGLTER 141
MAYADY DLM LTE + S MVK ITGGY IKYHP+GP G EL IDF+PPW+R+PM+ LE K+ VKLP D TE AR+ L+ L +KHDV C APRTV RLLDKLVG+F+E D I+P F+ +HPEIMSPLAK+HR PGLTER
Sbjct: 326 MAYADYKDLMTLTEQMISGMVKYITGGYKIKYHPKGPEGEELEIDFTPPWRRVPMMAELERKVGVKLPAADQLHTEQARKALDDLAKKHDVECPAPRTVARLLDKLVGDFVEIDCINPTFLCDHPEIMSPLAKTHRETPGLTER 469
BLAST of EWM21654.1 vs. NCBI_GenBank
Match: gi|668466690|gb|KFB53647.1| (AGAP000325-PA-like protein [Anopheles sinensis]) HSP 1 Score: 194.126 bits (492), Expect = 8.373e-57 Identity = 91/144 (63.19%), Postives = 107/144 (74.31%), Query Frame = 0
Query: 1 MAYADYHDLMDLTETLFSEMVKEITGGYVIKYHPEGPGGSELTIDFSPPWKRIPMVEGLEEKLKVKLPP---LDTEAAREVLEGLCQKHDVACSAPRTVPRLLDKLVGEFLEEDIISPAFITEHPEIMSPLAKSHRTKPGLTER 141
MAYADYHDLMD+TE L S MV I G Y IKYHP GP G E IDF+PP++R+ M+E LE+ LKVK P L T AAR+ L+ LC +H V C APRT RLLDKL G+FLEE I+P FI +HP+IMSPLAK HR++PGLTER
Sbjct: 292 MAYADYHDLMDITERLLSSMVHAIHGTYQIKYHPNGPQGKEYVIDFTPPFRRLSMIESLEDILKVKFPAATELHTNAARQFLDDLCVQHQVDCRAPRTTSRLLDKLTGQFLEEQCINPTFICDHPQIMSPLAKYHRSQPGLTER 435
BLAST of EWM21654.1 vs. NCBI_GenBank
Match: gi|195171943|ref|XP_002026761.1| (GL27002 [Drosophila persimilis] >gi|194111700|gb|EDW33743.1| GL27002 [Drosophila persimilis]) HSP 1 Score: 190.274 bits (482), Expect = 1.993e-55 Identity = 91/144 (63.19%), Postives = 107/144 (74.31%), Query Frame = 0
Query: 1 MAYADYHDLMDLTETLFSEMVKEITGGYVIKYHPEGPGGSELTIDFSPPWKRIPMVEGLEEKLKVKLPP---LDTEAAREVLEGLCQKHDVACSAPRTVPRLLDKLVGEFLEEDIISPAFITEHPEIMSPLAKSHRTKPGLTER 141
MAYADY D+MD+TE L S MVK I G Y IKYHPEGP G E +DF+PP+KR+ M++ LEEKLKV+ P +T A + L LC KH V C APRT RLLDKLVGEF+EE+ I+P FI EHP+IMSPLAK HR+ PGLTER
Sbjct: 262 MAYADYADVMDITEQLISGMVKSIRGSYKIKYHPEGPEGPEQELDFTPPFKRVSMIKTLEEKLKVQFPSAETFNTRATTDFLSQLCVKHQVECPAPRTTARLLDKLVGEFIEEECINPTFICEHPQIMSPLAKYHRSAPGLTER 405
BLAST of EWM21654.1 vs. NCBI_GenBank
Match: gi|983146457|gb|KWU44425.1| (lysyl-tRNA synthetase [Rhodotorula sp. JG-1b]) HSP 1 Score: 192.2 bits (487), Expect = 2.060e-55 Identity = 92/144 (63.89%), Postives = 107/144 (74.31%), Query Frame = 0
Query: 1 MAYADYHDLMDLTETLFSEMVKEITGGYVIKYHPEGPGGSELTIDFSPPWKRIPMVEGLEEKLKVKLPP---LDTEAAREVLEGLCQKHDVACSAPRTVPRLLDKLVGEFLEEDIISPAFITEHPEIMSPLAKSHRTKPGLTER 141
MAYAD HDLMDLTE+L S +VK ITGGY IKYHPEG G EL +DF+ PWKR M+E LE++L VK PP LDT + L LC KH+V CS PRT RLLDKLVGEF+E ISP+FI HP++MSPLAK HR++PGL ER
Sbjct: 352 MAYADMHDLMDLTESLLSGLVKHITGGYKIKYHPEGKEGPELELDFTTPWKRFDMIEELEKQLNVKFPPGNELDTPETNKFLRDLCTKHNVDCSEPRTNARLLDKLVGEFIENQCISPSFIVGHPQVMSPLAKHHRSRPGLCER 495
BLAST of EWM21654.1 vs. NCBI_GenBank
Match: gi|146189668|emb|CAM92102.1| (hypothetical protein, partial [Eristalis tenax]) HSP 1 Score: 182.185 bits (461), Expect = 2.577e-55 Identity = 87/144 (60.42%), Postives = 106/144 (73.61%), Query Frame = 0
Query: 1 MAYADYHDLMDLTETLFSEMVKEITGGYVIKYHPEGPGGSELTIDFSPPWKRIPMVEGLEEKLKVKLP---PLDTEAAREVLEGLCQKHDVACSAPRTVPRLLDKLVGEFLEEDIISPAFITEHPEIMSPLAKSHRTKPGLTER 141
MAYADY DL+D+TE + S MVK I G Y IKYHP+GP G E IDF+PP++R+ M++ LEEKL VK P L+T+ + L LC KH V C +PRT RLLDKLVGEF+EE I+P FI EHP++MSPLAK HR +PGLTER
Sbjct: 47 MAYADYSDLIDMTEKMISGMVKAIHGSYKIKYHPDGPEGEEQEIDFTPPFRRVSMIKTLEEKLNVKFPCPTTLNTKETADFLSQLCIKHQVECPSPRTAARLLDKLVGEFIEETCINPTFICEHPQVMSPLAKYHRKEPGLTER 190
BLAST of EWM21654.1 vs. NCBI_GenBank
Match: gi|524911670|ref|XP_005110695.1| (PREDICTED: lysine--tRNA ligase-like [Aplysia californica]) HSP 1 Score: 191.045 bits (484), Expect = 3.866e-55 Identity = 93/144 (64.58%), Postives = 110/144 (76.39%), Query Frame = 0
Query: 1 MAYADYHDLMDLTETLFSEMVKEITGGYVIKYHPEGPGGSELTIDFSPPWKRIPMVEGLEEKLKVKLPP---LDTEAAREVLEGLCQKHDVACSAPRTVPRLLDKLVGEFLEEDIISPAFITEHPEIMSPLAKSHRTKPGLTER 141
MAYADY DLM + ETL S MVK++TGGY I YHPEGP G +DF+PP+KRIPM+ LE+++ VK P L TE+AR+ L+ L KH V CS PRT RLLDK+VG+F+EE IISPAFITEHPE+MSPLAK HR PGLTER
Sbjct: 335 MAYADYQDLMHMAETLLSGMVKQLTGGYKITYHPEGPEGEAFEVDFTPPFKRIPMIATLEKEMGVKFPAATELHTESARKFLDELAVKHGVECSPPRTTARLLDKMVGDFIEEKIISPAFITEHPEVMSPLAKWHRDCPGLTER 478
BLAST of EWM21654.1 vs. NCBI_GenBank
Match: gi|405966314|gb|EKC31614.1| (Lysyl-tRNA synthetase [Crassostrea gigas]) HSP 1 Score: 189.889 bits (481), Expect = 6.168e-55 Identity = 88/144 (61.11%), Postives = 113/144 (78.47%), Query Frame = 0
Query: 1 MAYADYHDLMDLTETLFSEMVKEITGGYVIKYHPEGPGGSELTIDFSPPWKRIPMVEGLEEKLKVKLPP---LDTEAAREVLEGLCQKHDVACSAPRTVPRLLDKLVGEFLEEDIISPAFITEHPEIMSPLAKSHRTKPGLTER 141
MAYADY+DLM +TETL S MVK I GGY +KYHPEGP G E +D++PP+KR+ M++GLEE+L VK P ++E R+ L+GLC KH+V C APRT RLLDKLVGEF+E + ++P FI +HP++MSPLAK HR++PGLTER
Sbjct: 325 MAYADYNDLMKITETLLSGMVKHIHGGYKVKYHPEGPEGPEWEVDYTPPFKRVGMLKGLEERLAVKFPDSKEFESENTRKFLDGLCVKHEVECPAPRTAARLLDKLVGEFIESECVNPTFIIDHPQVMSPLAKWHRSEPGLTER 468
BLAST of EWM21654.1 vs. NCBI_GenBank
Match: gi|762126989|ref|XP_011446565.1| (PREDICTED: lysine--tRNA ligase isoform X2 [Crassostrea gigas]) HSP 1 Score: 189.889 bits (481), Expect = 6.587e-55 Identity = 88/144 (61.11%), Postives = 113/144 (78.47%), Query Frame = 0
Query: 1 MAYADYHDLMDLTETLFSEMVKEITGGYVIKYHPEGPGGSELTIDFSPPWKRIPMVEGLEEKLKVKLPP---LDTEAAREVLEGLCQKHDVACSAPRTVPRLLDKLVGEFLEEDIISPAFITEHPEIMSPLAKSHRTKPGLTER 141
MAYADY+DLM +TETL S MVK I GGY +KYHPEGP G E +D++PP+KR+ M++GLEE+L VK P ++E R+ L+GLC KH+V C APRT RLLDKLVGEF+E + ++P FI +HP++MSPLAK HR++PGLTER
Sbjct: 325 MAYADYNDLMKITETLLSGMVKHIHGGYKVKYHPEGPEGPEWEVDYTPPFKRVGMLKGLEERLAVKFPDSKEFESENTRKFLDGLCVKHEVECPAPRTAARLLDKLVGEFIESECVNPTFIIDHPQVMSPLAKWHRSEPGLTER 468
BLAST of EWM21654.1 vs. NCBI_GenBank
Match: gi|198467359|ref|XP_001354371.2| (uncharacterized protein Dpse_GA11433, isoform A [Drosophila pseudoobscura pseudoobscura] >gi|198149207|gb|EAL31424.2| uncharacterized protein Dpse_GA11433, isoform A [Drosophila pseudoobscura pseudoobscura]) HSP 1 Score: 189.889 bits (481), Expect = 7.749e-55 Identity = 91/144 (63.19%), Postives = 107/144 (74.31%), Query Frame = 0
Query: 1 MAYADYHDLMDLTETLFSEMVKEITGGYVIKYHPEGPGGSELTIDFSPPWKRIPMVEGLEEKLKVKLPP---LDTEAAREVLEGLCQKHDVACSAPRTVPRLLDKLVGEFLEEDIISPAFITEHPEIMSPLAKSHRTKPGLTER 141
MAYADY D+MD+TE L S MVK I G Y IKYHPEGP G E +DF+PP+KR+ M++ LEEKLKV+ P +T A + L LC KH V C APRT RLLDKLVGEF+EE+ I+P FI EHP+IMSPLAK HR+ PGLTER
Sbjct: 328 MAYADYADVMDITEQLISGMVKSIRGSYKIKYHPEGPEGPEQELDFTPPFKRVSMIKTLEEKLKVQFPSAETFNTRATTDFLSQLCVKHQVECPAPRTTARLLDKLVGEFIEEECINPTFICEHPQIMSPLAKYHRSAPGLTER 471 The following BLAST results are available for this feature:
BLAST of EWM21654.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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