EWM21657.1, cds9016 (CDS) Nannochloropsis gaditana

Overview
NameEWM21657.1
Unique Namecds9016
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:195677..196441 -

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Properties
Property NameValue
Protein idEWM21657.1
ProductLeucine-rich repeat, cysteine-containing subtype
Orig transcript idgnl|cribi|Naga_100738g1.7407.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:195677..196441 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR006553Leu-rich_rpt_Cys-con_subtyp
Homology
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BLAST of EWM21657.1 vs. NCBI_GenBank
Match: gi|585101915|gb|EWM21657.1| (Leucine-rich repeat, cysteine-containing subtype [Nannochloropsis gaditana])

HSP 1 Score: 491.886 bits (1265), Expect = 1.590e-175
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0 
Query:    1 MVWGGGEEVHDGEEEEEEEEEGEEEEEEEEEELTRGRHLFDLEGGEEEEEEDDEVREVGKREREEEQEREEEEEGEEEEREGAHAVGDKTRGPRGDTSSNQQGPNNGYSNSPRFSNGCNGREKPSSPGRPKRRHRGPTDRSVLLLAKTLGRNLQVLDLEGCEGVSNQGLLSLFLACHRLQRLVLNGLPRVDDVAVQALLPRRNRHLRLPCLVDLNLNVCRGVSLHAVQELKRQRPDILRVTYRREVALRGPTSF 254
            MVWGGGEEVHDGEEEEEEEEEGEEEEEEEEEELTRGRHLFDLEGGEEEEEEDDEVREVGKREREEEQEREEEEEGEEEEREGAHAVGDKTRGPRGDTSSNQQGPNNGYSNSPRFSNGCNGREKPSSPGRPKRRHRGPTDRSVLLLAKTLGRNLQVLDLEGCEGVSNQGLLSLFLACHRLQRLVLNGLPRVDDVAVQALLPRRNRHLRLPCLVDLNLNVCRGVSLHAVQELKRQRPDILRVTYRREVALRGPTSF
Sbjct:    1 MVWGGGEEVHDGEEEEEEEEEGEEEEEEEEEELTRGRHLFDLEGGEEEEEEDDEVREVGKREREEEQEREEEEEGEEEEREGAHAVGDKTRGPRGDTSSNQQGPNNGYSNSPRFSNGCNGREKPSSPGRPKRRHRGPTDRSVLLLAKTLGRNLQVLDLEGCEGVSNQGLLSLFLACHRLQRLVLNGLPRVDDVAVQALLPRRNRHLRLPCLVDLNLNVCRGVSLHAVQELKRQRPDILRVTYRREVALRGPTSF 254
The following BLAST results are available for this feature:
BLAST of EWM21657.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101915|gb|EWM21657.1|1.590e-175100.00Leucine-rich repeat, cysteine-containing subtype [... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9046rna9046Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications