EWM21660.1, cds9012 (CDS) Nannochloropsis gaditana

Overview
NameEWM21660.1
Unique Namecds9012
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:185564..187972 -

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Properties
Property NameValue
Protein idEWM21660.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100804g2.8730.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:185564..187972 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM21660.1 vs. NCBI_GenBank
Match: gi|585101919|gb|EWM21660.1| (hypothetical protein Naga_100804g2 [Nannochloropsis gaditana])

HSP 1 Score: 1627.07 bits (4212), Expect = 0.000e+0
Identity = 802/802 (100.00%), Postives = 802/802 (100.00%), Query Frame = 0
Query:    1 MDDRTGKTKNKSLSTVTFAEAHSSRRNENTTITMRQQFCGDDVNDAEYYYEQIETDCRSLEENAKRLGAANWDQVQCGDAATEGRDENLTNSRNRNPIETQTKIERVSSLVPGENLEGCSTSQVGHSLTSPAHQMPASSQKCTRISSRGDKTGIHTMRLPSSAPLPELTHQEHVYSGPEISPDIDRSQSRSNGDLSPPLPHSTLTNPTATMPTTHLSPTTVESPPKREPALSVTSRPPSSNQESSSSQSHGVITALMATLRAHTIGNDLPDALLTTHCQGLVKMLRETAALNRFILGESALLGDSQAYMDVCTHHVQRYATRQLGSLRILREDFQDKHAALQKELRGLREQASSLRARVFQAAWPEEKKTVILAALQRYLHVDQPGGELQTLDLTESAIGAVQKLRRQLPRLPEEADALREVFGKIKRVTRTLVALGLTTEEQTSSAWESVMQLLTYRPMGFVLEEAGRAWRELKDVKLQEAQRRLEQKGRLTALLERAGSPPMEETGMQQEAGISEALEMEGGRRKSVESCTSDRSLGRSSWGSKSRRSSSSSCSSGTAGERESVLEEDDPERPRDSSETSHTQTPPAGSNMTAPWASASSRKSSRSRLLRNGPSPTSSPSSPSTAPPFPRSATRPPARSSMYVVGTSASAMLGGAPVLTNPGGGAGGGRGRGPRASTGTGKSAGTVAAAAVPTRRTTPPPSTTTGRGANAGSGSKLHVRGAPGDDACLGIPVTEALSGRHEGLSSAVDAGSSITPHESTATAGNQPGKASHISRSTCSSRSKGMSQISASPDTRGWQQLP 802
            MDDRTGKTKNKSLSTVTFAEAHSSRRNENTTITMRQQFCGDDVNDAEYYYEQIETDCRSLEENAKRLGAANWDQVQCGDAATEGRDENLTNSRNRNPIETQTKIERVSSLVPGENLEGCSTSQVGHSLTSPAHQMPASSQKCTRISSRGDKTGIHTMRLPSSAPLPELTHQEHVYSGPEISPDIDRSQSRSNGDLSPPLPHSTLTNPTATMPTTHLSPTTVESPPKREPALSVTSRPPSSNQESSSSQSHGVITALMATLRAHTIGNDLPDALLTTHCQGLVKMLRETAALNRFILGESALLGDSQAYMDVCTHHVQRYATRQLGSLRILREDFQDKHAALQKELRGLREQASSLRARVFQAAWPEEKKTVILAALQRYLHVDQPGGELQTLDLTESAIGAVQKLRRQLPRLPEEADALREVFGKIKRVTRTLVALGLTTEEQTSSAWESVMQLLTYRPMGFVLEEAGRAWRELKDVKLQEAQRRLEQKGRLTALLERAGSPPMEETGMQQEAGISEALEMEGGRRKSVESCTSDRSLGRSSWGSKSRRSSSSSCSSGTAGERESVLEEDDPERPRDSSETSHTQTPPAGSNMTAPWASASSRKSSRSRLLRNGPSPTSSPSSPSTAPPFPRSATRPPARSSMYVVGTSASAMLGGAPVLTNPGGGAGGGRGRGPRASTGTGKSAGTVAAAAVPTRRTTPPPSTTTGRGANAGSGSKLHVRGAPGDDACLGIPVTEALSGRHEGLSSAVDAGSSITPHESTATAGNQPGKASHISRSTCSSRSKGMSQISASPDTRGWQQLP
Sbjct:    1 MDDRTGKTKNKSLSTVTFAEAHSSRRNENTTITMRQQFCGDDVNDAEYYYEQIETDCRSLEENAKRLGAANWDQVQCGDAATEGRDENLTNSRNRNPIETQTKIERVSSLVPGENLEGCSTSQVGHSLTSPAHQMPASSQKCTRISSRGDKTGIHTMRLPSSAPLPELTHQEHVYSGPEISPDIDRSQSRSNGDLSPPLPHSTLTNPTATMPTTHLSPTTVESPPKREPALSVTSRPPSSNQESSSSQSHGVITALMATLRAHTIGNDLPDALLTTHCQGLVKMLRETAALNRFILGESALLGDSQAYMDVCTHHVQRYATRQLGSLRILREDFQDKHAALQKELRGLREQASSLRARVFQAAWPEEKKTVILAALQRYLHVDQPGGELQTLDLTESAIGAVQKLRRQLPRLPEEADALREVFGKIKRVTRTLVALGLTTEEQTSSAWESVMQLLTYRPMGFVLEEAGRAWRELKDVKLQEAQRRLEQKGRLTALLERAGSPPMEETGMQQEAGISEALEMEGGRRKSVESCTSDRSLGRSSWGSKSRRSSSSSCSSGTAGERESVLEEDDPERPRDSSETSHTQTPPAGSNMTAPWASASSRKSSRSRLLRNGPSPTSSPSSPSTAPPFPRSATRPPARSSMYVVGTSASAMLGGAPVLTNPGGGAGGGRGRGPRASTGTGKSAGTVAAAAVPTRRTTPPPSTTTGRGANAGSGSKLHVRGAPGDDACLGIPVTEALSGRHEGLSSAVDAGSSITPHESTATAGNQPGKASHISRSTCSSRSKGMSQISASPDTRGWQQLP 802          
BLAST of EWM21660.1 vs. NCBI_GenBank
Match: gi|298704819|emb|CBJ48967.1| (hypothetical protein Esi_0102_0077 [Ectocarpus siliculosus])

HSP 1 Score: 71.633 bits (174), Expect = 3.258e-9
Identity = 59/243 (24.28%), Postives = 107/243 (44.03%), Query Frame = 0
Query:  269 LPDALLTTHCQGLVKMLRETAALNRFILGESALLGDSQAYMDVCTHHVQRYATRQLGSLRILREDFQDKHAALQKELRGLREQASSLRARVFQAAWPEEKKTVILAALQRYLHV--DQPGGELQTLDLTESAIGAVQKLRRQLPRLPEEADALREVFGKIKRVTRTLVALGLTTEEQT---SSAWESVMQLLTYRPMGFVLEEAGRAWRELKDVKLQEAQRRLEQKGRLTALLE--RAGSPPM 504
            LP        + LV+ +RE   L R I  ES    D  AY+++     +    R++   R+L++DF +K    ++  + +    S + AR  +     EKKT+ L A+Q Y +V  +  G      + T+  I   ++ R ++ ++P  AD++ ++   I+R       L   +   T      W SV++ L   P+      A    + LK +K ++ + +  +  RL   LE     +PPM
Sbjct:   23 LPQDFKLKQVRSLVRYMREVDGLVRGINSESGFEADCTAYLEILCTKEESELNRRVSCTRVLKQDFDEKRREWRRTKKNVINAISEMSARALKFECS-EKKTIALHAIQFYKNVMANDNGAIPGESESTDGLIDQYRRHRDEISKIPFYADSIMKMLKDIRRTVNASAKLQPGSNAFTQFLDEWWASVVEFLEQSPIVDAERNAREVMQTLKKLKGKQEEFKKREMSRLMNKLEAQDKATPPM 264          
BLAST of EWM21660.1 vs. NCBI_GenBank
Match: gi|298704808|emb|CBJ48956.1| (hypothetical protein Esi_0102_0050 [Ectocarpus siliculosus])

HSP 1 Score: 65.4698 bits (158), Expect = 9.738e-8
Identity = 50/195 (25.64%), Postives = 95/195 (48.72%), Query Frame = 0
Query:  269 LPDALLTTHCQGLVKMLRETAALNRFILGESALLGDSQAYMDVCTHHVQRYATRQLGSLRILREDFQDKHAALQKELRGLREQASSLRARVFQAAWPEEKKTVILAALQRY---LHVDQPG--GELQTLDLTESAIGAVQKLRRQLPRLPEEADALREVFGKIKRVTRTLVAL--GLTTEEQ-TSSAWESVMQLL 455
            LPDA      + LV+ ++E   L R I+ ES    D+ +Y+++          R++ S R+LR+D+ +K    +++ + +     S+ AR  +    +E+KT+ L AL  Y   +  D     GE ++   T+S +   ++ R ++ ++P  AD++ ++   I++  R    L  G  +  Q     W SV+Q L
Sbjct:   30 LPDAFKLAQVRSLVRYIKEVGLLQRRIIDESGFEADTNSYLEILCAKEDGDLMRKVSSTRVLRQDYDEKRLEWKRQKKSVINAIGSMTARTLRFE-DKERKTIALHALAFYKSIMATDDGAIPGESES---TDSLMEQYKRHRSEISKIPMYADSILKMLKDIRKTVRASSKLQPGTNSFAQFLEEWWASVVQFL 220          
The following BLAST results are available for this feature:
BLAST of EWM21660.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 3
Match NameE-valueIdentityDescription
gi|585101919|gb|EWM21660.1|0.000e+0100.00hypothetical protein Naga_100804g2 [Nannochloropsi... [more]
gi|298704819|emb|CBJ48967.1|3.258e-924.28hypothetical protein Esi_0102_0077 [Ectocarpus sil... [more]
gi|298704808|emb|CBJ48956.1|9.738e-825.64hypothetical protein Esi_0102_0050 [Ectocarpus sil... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9042rna9042Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications