EWM21665.1, cds9008 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21665.1 vs. NCBI_GenBank
Match: gi|585101928|gb|EWM21665.1| (clathrin assembly small subunit protein ap19 [Nannochloropsis gaditana]) HSP 1 Score: 333.954 bits (855), Expect = 4.910e-116 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
Query: 1 MINFLLLVSRQGKTRLSKWYKHYTTKEKARAIRELTNLVLARAPKMCNFIEWRDKKVIYKRYASLFFIAAVDSSDNELITLEMIHLFVEILDRYFGNVCELDIIFNFHKAYYILDELFIGGHLQESSKNEVLRVCSQMDELMEEQKDDNLAAMVAQMSRSR 161
MINFLLLVSRQGKTRLSKWYKHYTTKEKARAIRELTNLVLARAPKMCNFIEWRDKKVIYKRYASLFFIAAVDSSDNELITLEMIHLFVEILDRYFGNVCELDIIFNFHKAYYILDELFIGGHLQESSKNEVLRVCSQMDELMEEQKDDNLAAMVAQMSRSR
Sbjct: 1 MINFLLLVSRQGKTRLSKWYKHYTTKEKARAIRELTNLVLARAPKMCNFIEWRDKKVIYKRYASLFFIAAVDSSDNELITLEMIHLFVEILDRYFGNVCELDIIFNFHKAYYILDELFIGGHLQESSKNEVLRVCSQMDELMEEQKDDNLAAMVAQMSRSR 161
BLAST of EWM21665.1 vs. NCBI_GenBank
Match: gi|299469872|emb|CBN76726.1| (Clathrin assembly complex, small subunit [Ectocarpus siliculosus]) HSP 1 Score: 263.462 bits (672), Expect = 4.007e-88 Identity = 120/148 (81.08%), Postives = 136/148 (91.89%), Query Frame = 0
Query: 1 MINFLLLVSRQGKTRLSKWYKHYTTKEKARAIRELTNLVLARAPKMCNFIEWRDKKVIYKRYASLFFIAAVDSSDNELITLEMIHLFVEILDRYFGNVCELDIIFNFHKAYYILDELFIGGHLQESSKNEVLRVCSQMDELMEEQKDD 148
MINFLLL+SRQGKTRL+KWY+ Y+ KEKAR +RE+T+ VLARA KMCNF+EWRDKK++YKRYASLFF+A +D DNELITLE IHLFVE+LDRYFGNVCELDIIFNFHKAYYILDELFIGG LQESSK EVLRVCSQMD+LMEE K++
Sbjct: 1 MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARALKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDDLMEEAKEE 148
BLAST of EWM21665.1 vs. NCBI_GenBank
Match: gi|676386773|ref|XP_009036665.1| (hypothetical protein AURANDRAFT_25892 [Aureococcus anophagefferens] >gi|676399647|ref|XP_009043101.1| hypothetical protein AURANDRAFT_35471 [Aureococcus anophagefferens] >gi|323445733|gb|EGB02199.1| hypothetical protein AURANDRAFT_35471 [Aureococcus anophagefferens] >gi|323452802|gb|EGB08675.1| hypothetical protein AURANDRAFT_25892 [Aureococcus anophagefferens]) HSP 1 Score: 244.202 bits (622), Expect = 2.879e-80 Identity = 121/170 (71.18%), Postives = 136/170 (80.00%), Query Frame = 0
Query: 1 MINFLLLVSRQGKTRLSKWYKHYTTKEKARAIRELTNLVLARAPKMCNFIEWR-DKKVIYKRYASLFFI--------------------AAVDSSDNELITLEMIHLFVEILDRYFGNVCELDIIFNFHKAYYILDELFIGGHLQESSKNEVLRVCSQMDELMEEQKDDN 149
MINF+LLVSRQGKTRL+KWY+ Y+TKEKAR +RE T VLARAPKMCNFIEWR DKK++YKRYASLFFI A VDS DNELITLEMIHLFVE+LDRYFGNVCELDIIFNFHKAYYILDELFI G L+ESSK EVL +C+QMDE+M+E K++
Sbjct: 1 MINFMLLVSRQGKTRLTKWYESYSTKEKARIVREAT--VLARAPKMCNFIEWRADKKIVYKRYASLFFICCGDRRRERAPRRRKLKFLPAGVDSEDNELITLEMIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIAGELEESSKKEVLSICAQMDEMMDESKEEG 168
BLAST of EWM21665.1 vs. NCBI_GenBank
Match: gi|635365383|emb|CCI46255.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 237.654 bits (605), Expect = 4.806e-78 Identity = 108/151 (71.52%), Postives = 131/151 (86.75%), Query Frame = 0
Query: 1 MINFLLLVSRQGKTRLSKWYKHYTTKEKARAIRELTNLVLARAPKMCNFIEWRDKKVIYKRYASLFFIAAVDSSDNELITLEMIHLFVEILDRYFGNVCELDIIFNFHKAYYILDELFIGGHLQESSKNEVLRVCSQMDELMEEQKDDNLA 151
MI +LLVSRQGKTRL+KWY + T KEKAR IRE+T LVL+R PK CNFIE++DKK++YKRYASLFFIA + +NELITLE IHL+VE+LDRYFGNVCELDIIFNFHKAYYILDELF+GG+LQESSK EVLR+C+Q ++ ++E K++ A
Sbjct: 1 MIESILLVSRQGKTRLAKWYINATIKEKARMIREITTLVLSRPPKQCNFIEFKDKKIVYKRYASLFFIACISKDENELITLEAIHLYVEVLDRYFGNVCELDIIFNFHKAYYILDELFVGGYLQESSKREVLRICTQQEDYVDESKEEGFA 151
BLAST of EWM21665.1 vs. NCBI_GenBank
Match: gi|325183550|emb|CCA18011.1| (Clathrin assembly complex putative [Albugo laibachii Nc14]) HSP 1 Score: 237.269 bits (604), Expect = 7.532e-78 Identity = 108/151 (71.52%), Postives = 131/151 (86.75%), Query Frame = 0
Query: 1 MINFLLLVSRQGKTRLSKWYKHYTTKEKARAIRELTNLVLARAPKMCNFIEWRDKKVIYKRYASLFFIAAVDSSDNELITLEMIHLFVEILDRYFGNVCELDIIFNFHKAYYILDELFIGGHLQESSKNEVLRVCSQMDELMEEQKDDNLA 151
MI +LLVSRQGKTRL+KWY + T KEKAR IRE+T LVL+R PK CNFIE++DKK++YKRYASLFFIA + +NELITLE IHL+VE+LDRYFGNVCELDIIFNFHKAYYILDELF+GG+LQESSK EVLR+C+Q ++ ++E K++ A
Sbjct: 1 MIESILLVSRQGKTRLAKWYINATIKEKARMIREITTLVLSRPPKQCNFIEFKDKKIVYKRYASLFFIACISKDENELITLEAIHLYVEVLDRYFGNVCELDIIFNFHKAYYILDELFLGGYLQESSKREVLRICTQQEDYVDESKEEGFA 151
BLAST of EWM21665.1 vs. NCBI_GenBank
Match: gi|698814486|ref|XP_009840272.1| (hypothetical protein H257_14209 [Aphanomyces astaci] >gi|574104646|gb|ETV70175.1| hypothetical protein H257_14209 [Aphanomyces astaci]) HSP 1 Score: 236.884 bits (603), Expect = 1.002e-77 Identity = 107/148 (72.30%), Postives = 126/148 (85.14%), Query Frame = 0
Query: 1 MINFLLLVSRQGKTRLSKWYKHYTTKEKARAIRELTNLVLARAPKMCNFIEWRDKKVIYKRYASLFFIAAVDSSDNELITLEMIHLFVEILDRYFGNVCELDIIFNFHKAYYILDELFIGGHLQESSKNEVLRVCSQMDELMEEQKDD 148
MI+F+LLVSRQGKTRLSKWY K+KAR IRE+T LVL R K CNFIEW+D+K++YKRYASL+F+A + +NELITLE+IHLFVE+LDRYFGNVCELDIIFNFHKAYYILDEL IGG+LQE SK E+LRVC Q ++ MEE K+D
Sbjct: 1 MIDFMLLVSRQGKTRLSKWYSAVPLKDKARIIREVTTLVLGRPQKQCNFIEWKDQKIVYKRYASLYFVACISKEENELITLEVIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELLIGGNLQEPSKKEILRVCQQQEDFMEESKED 148
BLAST of EWM21665.1 vs. NCBI_GenBank
Match: gi|673049143|ref|XP_008878532.1| (hypothetical protein H310_12992 [Aphanomyces invadans] >gi|574465727|gb|ETV92762.1| hypothetical protein H310_12992 [Aphanomyces invadans]) HSP 1 Score: 236.884 bits (603), Expect = 1.093e-77 Identity = 107/148 (72.30%), Postives = 126/148 (85.14%), Query Frame = 0
Query: 1 MINFLLLVSRQGKTRLSKWYKHYTTKEKARAIRELTNLVLARAPKMCNFIEWRDKKVIYKRYASLFFIAAVDSSDNELITLEMIHLFVEILDRYFGNVCELDIIFNFHKAYYILDELFIGGHLQESSKNEVLRVCSQMDELMEEQKDD 148
MI+F+LLVSRQGKTRLSKWY K+KAR IRE+T LVL R K CNFIEW+D+K++YKRYASL+F+A + +NELITLE+IHLFVE+LDRYFGNVCELDIIFNFHKAYYILDEL IGG+LQE SK E+LRVC Q ++ MEE K+D
Sbjct: 1 MIDFMLLVSRQGKTRLSKWYSTVPLKDKARIIREVTTLVLGRPQKQCNFIEWKDQKIVYKRYASLYFVACISKEENELITLEVIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELLIGGNLQEPSKKEILRVCQQQEDFMEESKED 148
BLAST of EWM21665.1 vs. NCBI_GenBank
Match: gi|1173948802|gb|OQR96893.1| (Aps1, sigma subunit of the adaptin 1 complex [Thraustotheca clavata]) HSP 1 Score: 234.572 bits (597), Expect = 1.012e-76 Identity = 106/148 (71.62%), Postives = 128/148 (86.49%), Query Frame = 0
Query: 1 MINFLLLVSRQGKTRLSKWYKHYTTKEKARAIRELTNLVLARAPKMCNFIEWRDKKVIYKRYASLFFIAAVDSSDNELITLEMIHLFVEILDRYFGNVCELDIIFNFHKAYYILDELFIGGHLQESSKNEVLRVCSQMDELMEEQKDD 148
MI+F+LLVSRQGKTRLSKWY K+KAR IR++T+LVL R K CNFIEW+D+K++YKRYASL+F+A + +NELITLE+IHLFVE+LDRYFGNVCELDIIFNFHKAYYILDEL IGG+LQE SK EVLRVC+Q ++ MEE K++
Sbjct: 1 MIDFMLLVSRQGKTRLSKWYSTVPLKDKARIIRDVTSLVLGRPQKQCNFIEWKDQKIVYKRYASLYFVACISKEENELITLEIIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELLIGGNLQEPSKKEVLRVCNQQEDFMEETKEE 148
BLAST of EWM21665.1 vs. NCBI_GenBank
Match: gi|669144406|ref|XP_008607765.1| (hypothetical protein SDRG_03896 [Saprolegnia diclina VS20] >gi|813164930|ref|XP_012203525.1| hypothetical protein SPRG_09014 [Saprolegnia parasitica CBS 223.65] >gi|530740699|gb|EQC38941.1| hypothetical protein SDRG_03896 [Saprolegnia diclina VS20] >gi|641531655|gb|KDO25715.1| hypothetical protein SPRG_09014 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 233.802 bits (595), Expect = 1.808e-76 Identity = 105/148 (70.95%), Postives = 128/148 (86.49%), Query Frame = 0
Query: 1 MINFLLLVSRQGKTRLSKWYKHYTTKEKARAIRELTNLVLARAPKMCNFIEWRDKKVIYKRYASLFFIAAVDSSDNELITLEMIHLFVEILDRYFGNVCELDIIFNFHKAYYILDELFIGGHLQESSKNEVLRVCSQMDELMEEQKDD 148
MI+F+LLVSRQGKTRLSKWY K+KAR IR++T+LVL R K CNFIEW+D+K++YKRYASL+F+A + +NELITLE+IHLFVE+LDRYFGNVCELDIIFNFHKAYYILDEL IGG+LQE SK E+LRVC+Q ++ MEE K++
Sbjct: 1 MIDFMLLVSRQGKTRLSKWYSAVPLKDKARIIRDVTSLVLGRPQKQCNFIEWKDQKIVYKRYASLYFVACISKEENELITLEIIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELLIGGNLQEPSKKEILRVCNQQEDFMEETKEE 148
BLAST of EWM21665.1 vs. NCBI_GenBank
Match: gi|698814484|ref|XP_009840271.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574104647|gb|ETV70176.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 230.335 bits (586), Expect = 3.518e-75 Identity = 104/144 (72.22%), Postives = 122/144 (84.72%), Query Frame = 0
Query: 5 LLLVSRQGKTRLSKWYKHYTTKEKARAIRELTNLVLARAPKMCNFIEWRDKKVIYKRYASLFFIAAVDSSDNELITLEMIHLFVEILDRYFGNVCELDIIFNFHKAYYILDELFIGGHLQESSKNEVLRVCSQMDELMEEQKDD 148
+LLVSRQGKTRLSKWY K+KAR IRE+T LVL R K CNFIEW+D+K++YKRYASL+F+A + +NELITLE+IHLFVE+LDRYFGNVCELDIIFNFHKAYYILDEL IGG+LQE SK E+LRVC Q ++ MEE K+D
Sbjct: 1 MLLVSRQGKTRLSKWYSAVPLKDKARIIREVTTLVLGRPQKQCNFIEWKDQKIVYKRYASLYFVACISKEENELITLEVIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELLIGGNLQEPSKKEILRVCQQQEDFMEESKED 144 The following BLAST results are available for this feature:
BLAST of EWM21665.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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