EWM21670.1, cds9004 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21670.1 vs. NCBI_GenBank
Match: gi|585101938|gb|EWM21670.1| (carboxyl-terminal protease, partial [Nannochloropsis gaditana]) HSP 1 Score: 697.582 bits (1799), Expect = 0.000e+0 Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 0 Query: 1 MSESERVPESPPSHACVQNPPILPNASFPANLQYFHRPASIHQGIMPKRRIVAVLRPLPPVASVFVIGPLHILLLLLCLGFPASTAFHLHPPPSLLPSSPSSAMHLPRAPSSRSYHPCPGGGGRPQTLKLASPGDADDPSPPSFPKLLRDMFGRQNRVTAKRAPASSTRPPSSSRPLKVQPPAKKAFPWPPASSRSSSSSSSSSSSPRPQTLPRNTEAGPTSSKSTGFQAPLGNLRPFVSDLTRRLQTPVSLGPALTKLAFLSVGFLGGGASGLLLLLSPSSPLTSLPPSLLQPVTLFENILLEIDRGYVEEVDDQKLFESAVESMLSSLDPYTEFEGEQLAQDMREVGGEGRGEGGR 358 MSESERVPESPPSHACVQNPPILPNASFPANLQYFHRPASIHQGIMPKRRIVAVLRPLPPVASVFVIGPLHILLLLLCLGFPASTAFHLHPPPSLLPSSPSSAMHLPRAPSSRSYHPCPGGGGRPQTLKLASPGDADDPSPPSFPKLLRDMFGRQNRVTAKRAPASSTRPPSSSRPLKVQPPAKKAFPWPPASSRSSSSSSSSSSSPRPQTLPRNTEAGPTSSKSTGFQAPLGNLRPFVSDLTRRLQTPVSLGPALTKLAFLSVGFLGGGASGLLLLLSPSSPLTSLPPSLLQPVTLFENILLEIDRGYVEEVDDQKLFESAVESMLSSLDPYTEFEGEQLAQDMREVGGEGRGEGGR Sbjct: 1 MSESERVPESPPSHACVQNPPILPNASFPANLQYFHRPASIHQGIMPKRRIVAVLRPLPPVASVFVIGPLHILLLLLCLGFPASTAFHLHPPPSLLPSSPSSAMHLPRAPSSRSYHPCPGGGGRPQTLKLASPGDADDPSPPSFPKLLRDMFGRQNRVTAKRAPASSTRPPSSSRPLKVQPPAKKAFPWPPASSRSSSSSSSSSSSPRPQTLPRNTEAGPTSSKSTGFQAPLGNLRPFVSDLTRRLQTPVSLGPALTKLAFLSVGFLGGGASGLLLLLSPSSPLTSLPPSLLQPVTLFENILLEIDRGYVEEVDDQKLFESAVESMLSSLDPYTEFEGEQLAQDMREVGGEGRGEGGR 358
BLAST of EWM21670.1 vs. NCBI_GenBank
Match: gi|873232578|emb|CEM05181.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 85.5001 bits (210), Expect = 1.782e-14 Identity = 52/121 (42.98%), Postives = 72/121 (59.50%), Query Frame = 0 Query: 239 VSDLTRRLQTPVSLGPALTKLAFLSVG-FLGGGASGLLLLLSPS-SPLTSLPPSLLQPVTLFENILLEIDRGYVEEVDDQKLFESAVESMLSSLDPYTEFEGEQLAQDMRE-VGGEGRGEG 356 V + R L P P + L + +G F+GG SG++L +P+ + + + V LFE IL +++RGYVE+VD +KLF +AV +ML SLDPYTEFE Q A D+RE V G G G Sbjct: 177 VEVMNRTLSVP---APDVRSLPWGGIGSFVGGAVSGVILTFGLLLAPVQMIDEPVRRSVALFETILTDVERGYVEKVDTEKLFNTAVTAMLRSLDPYTEFENLQAASDLRENVAGRYGGVG 294
BLAST of EWM21670.1 vs. NCBI_GenBank
Match: gi|298706117|emb|CBJ29210.1| (carboxy-terminal peptidase [Ectocarpus siliculosus]) HSP 1 Score: 83.5741 bits (205), Expect = 8.025e-14 Identity = 48/110 (43.64%), Postives = 67/110 (60.91%), Query Frame = 0 Query: 259 LAFLSVGFLGGGASGLLLLLSPSSPLTSLPPSLLQPVTLFENILLEIDRGYVEEVDDQKLFESAVESMLSSLDPYTEFEGEQLAQDMREV-------------GGEGRGE 355 + + G L G A + LL P S L S P L + +TLFEN+L++ID+GYVEEV+ ++L E+AV SML +LDPYTE++ Q A D++E GG+ RGE Sbjct: 252 VGIYAGGLLSGLALAVGLLTVPYSDLGS--PGLRKSLTLFENVLVDIDQGYVEEVNPERLLETAVGSMLRTLDPYTEYQNNQAAADLKETVSGRYGGVGLVISGGKQRGE 359
BLAST of EWM21670.1 vs. NCBI_GenBank
Match: gi|224004336|ref|XP_002295819.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|209585851|gb|ACI64536.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 76.6406 bits (187), Expect = 1.612e-11 Identity = 38/68 (55.88%), Postives = 50/68 (73.53%), Query Frame = 0 Query: 290 SLLQPVTLFENILLEIDRGYVEEVDDQKLFESAVESMLSSLDPYTEFEGEQLAQDMRE-VGGEGRGEG 356 ++ QPV LFE IL +++ YV++VD QKLFE+ V++M SSLDPYTEFE Q AQD+ E V G+ G G Sbjct: 282 NINQPVILFETILNDLNDAYVDDVDIQKLFETGVKAMTSSLDPYTEFESRQEAQDLEESVSGKYGGVG 349
BLAST of EWM21670.1 vs. NCBI_GenBank
Match: gi|1210519557|dbj|GAX21681.1| (hypothetical protein FisN_29Hh122 [Fistulifera solaris]) HSP 1 Score: 75.0998 bits (183), Expect = 4.138e-11 Identity = 39/74 (52.70%), Postives = 55/74 (74.32%), Query Frame = 0 Query: 285 TSLPPS-LLQPVTLFENILLEIDRGYVEEVDDQKLFESAVESMLSSLDPYTEFEGEQLAQDMRE-VGGEGRGEG 356 TS P + LLQPVTLFE IL ++D YV+ VD Q+LF++ +++ML SLDPYTEFE ++ AQ++ E + G+ G G Sbjct: 120 TSTPDTKLLQPVTLFETILSDLDSTYVDPVDTQQLFQTGIQAMLQSLDPYTEFEAKEEAQNVMESIDGKYGGVG 193
BLAST of EWM21670.1 vs. NCBI_GenBank
Match: gi|219128277|ref|XP_002184343.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404144|gb|EEC44092.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 75.0998 bits (183), Expect = 4.690e-11 Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 0 Query: 265 GFLGGGASGLLLLLSPS-SPLTSLPPSLLQPVTLFENILLEIDRGYVEEVDDQKLFESAVESMLSSLDPYTEFEGEQLAQDMRE 347 GFL +G L + P+ + SL QPVTLFE IL ++++ YVEEVD KLFE+ + +ML SLDPYTEFE Q A + E Sbjct: 184 GFLVSFTAGAFLATAAIIYPIYASVESLSQPVTLFETILGDLEQAYVEEVDTNKLFETGIAAMLRSLDPYTEFEAAQEAVALTE 267
BLAST of EWM21670.1 vs. NCBI_GenBank
Match: gi|551643052|ref|XP_005824321.1| (hypothetical protein GUITHDRAFT_116454 [Guillardia theta CCMP2712] >gi|428168396|gb|EKX37341.1| hypothetical protein GUITHDRAFT_116454 [Guillardia theta CCMP2712]) HSP 1 Score: 71.633 bits (174), Expect = 5.091e-10 Identity = 31/57 (54.39%), Postives = 45/57 (78.95%), Query Frame = 0 Query: 290 SLLQPVTLFENILLEIDRGYVEEVDDQKLFESAVESMLSSLDPYTEFEGEQLAQDMR 346 S+++ V LFE+IL +ID GYVE+V +KLFE+ V +ML SLDPYTEFE + A++++ Sbjct: 96 SVVEDVALFEHILRDIDTGYVEKVSTEKLFETGVRAMLGSLDPYTEFENNKAAENLQ 152
BLAST of EWM21670.1 vs. NCBI_GenBank
Match: gi|1072231001|gb|OEU15734.1| (Peptidase_S41-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 70.0922 bits (170), Expect = 1.729e-9 Identity = 32/51 (62.75%), Postives = 38/51 (74.51%), Query Frame = 0 Query: 297 LFENILLEIDRGYVEEVDDQKLFESAVESMLSSLDPYTEFEGEQLAQDMRE 347 LFE IL ++DRGYV+ VD KLFE+ V +ML SLDPYTEFE + AQ M E Sbjct: 2 LFETILADLDRGYVDPVDTNKLFETGVSAMLRSLDPYTEFEAREEAQQMNE 52
BLAST of EWM21670.1 vs. NCBI_GenBank
Match: gi|397568775|gb|EJK46335.1| (hypothetical protein THAOC_34996 [Thalassiosira oceanica]) HSP 1 Score: 67.3958 bits (163), Expect = 1.506e-8 Identity = 34/65 (52.31%), Postives = 46/65 (70.77%), Query Frame = 0 Query: 293 QPVTLFENILLEIDRGYVEEVDDQKLFESAVESMLSSLDPYTEFEGEQLAQDMRE-VGGEGRGEG 356 QPV LFE IL +++ YV++VD QKLFE+ V++M +SLDPYTEFE A ++ E V G+ G G Sbjct: 134 QPVILFETILNDLNNAYVDDVDIQKLFETGVKAMTASLDPYTEFESRTEAMELEESVSGKYGGVG 198
BLAST of EWM21670.1 vs. NCBI_GenBank
Match: gi|1210526413|dbj|GAX14901.1| (carboxyl-terminal processing protease [Fistulifera solaris]) HSP 1 Score: 67.0106 bits (162), Expect = 2.160e-8 Identity = 33/68 (48.53%), Postives = 46/68 (67.65%), Query Frame = 0 Query: 291 LLQPVTLFENILLEIDRGYVEEVDDQKLFESAVESMLSSLDPYTEFEG--EQLAQDMREVGGEGRGEG 356 L QPVTLFE IL +++ YV+ VD Q+LF++ +++ML SLDPYTEFE E+ M + G+ G G Sbjct: 142 LFQPVTLFETILSDLETTYVDPVDTQQLFQTGIQAMLQSLDPYTEFEANKEEAQNVMESIDGKYGGVG 209 The following BLAST results are available for this feature:
BLAST of EWM21670.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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