EWM21677.1, cds8996 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21677.1 vs. NCBI_GenBank
Match: gi|585101950|gb|EWM21677.1| (small rna degrading nuclease 5-like protein [Nannochloropsis gaditana]) HSP 1 Score: 394.815 bits (1013), Expect = 5.930e-139 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0 Query: 1 MCLTEAGLELTRLTLVDEMGRVILDELVRPSTPIIDYLTAYSGITPASLASVTTTLPSLQPTLLALLAEAPTYLVGHGLEGDLRALRIHHPYLIDTAVLYPHPKGAPYKRSLKDLAKDLLDGREVQAGHGSSGHDSYQDAVTALELALLKMTQAPGFAIPEAWAEGGREGGREGGEEPLFGCMRGATEGKGRSVGGAGD 199 MCLTEAGLELTRLTLVDEMGRVILDELVRPSTPIIDYLTAYSGITPASLASVTTTLPSLQPTLLALLAEAPTYLVGHGLEGDLRALRIHHPYLIDTAVLYPHPKGAPYKRSLKDLAKDLLDGREVQAGHGSSGHDSYQDAVTALELALLKMTQAPGFAIPEAWAEGGREGGREGGEEPLFGCMRGATEGKGRSVGGAGD Sbjct: 1 MCLTEAGLELTRLTLVDEMGRVILDELVRPSTPIIDYLTAYSGITPASLASVTTTLPSLQPTLLALLAEAPTYLVGHGLEGDLRALRIHHPYLIDTAVLYPHPKGAPYKRSLKDLAKDLLDGREVQAGHGSSGHDSYQDAVTALELALLKMTQAPGFAIPEAWAEGGREGGREGGEEPLFGCMRGATEGKGRSVGGAGD 199
BLAST of EWM21677.1 vs. NCBI_GenBank
Match: gi|1002215825|gb|KXT10906.1| (hypothetical protein AC579_3483 [Pseudocercospora musae]) HSP 1 Score: 170.629 bits (431), Expect = 8.533e-46 Identity = 89/168 (52.98%), Postives = 113/168 (67.26%), Query Frame = 0 Query: 1 MCLTEAG------LELTRLTLVDEMGRVILDELVRPSTPIIDYLTAYSGITPASLASVTTTLPSLQPTLLALLAEAPTYLVGHGLEGDLRALRIHHPYLIDTAVLYPHPKGAPYKRSLKDLAKDLLDGREVQAGHGSSGHDSYQDAVTALELALLKMTQAPGFAIPEA 162 MC+T LTR++LVD G+V+LDELV+P+ PI DYLTAYSGITP L +VTTTL +Q LL++L T LVGH L DL AL+I HPY+IDTA+LYPHP+G P K SLK L + L RE+Q GHGS+GH+S +DA L+L LK + + P+A Sbjct: 396 MCITSPKGITPQVFSLTRVSLVDWDGQVVLDELVKPAKPITDYLTAYSGITPTMLENVTTTLSDIQKKLLSILTPQ-TILVGHSLNSDLNALQITHPYIIDTALLYPHPRGPPLKSSLKWLCQKYL-SREIQKGHGSTGHNSVEDAKAVLDLVKLKTEKGKAWGTPDA 561
BLAST of EWM21677.1 vs. NCBI_GenBank
Match: gi|631371966|ref|XP_007920363.1| (hypothetical protein MYCFIDRAFT_75369 [Pseudocercospora fijiensis CIRAD86] >gi|452987766|gb|EME87521.1| hypothetical protein MYCFIDRAFT_75369 [Pseudocercospora fijiensis CIRAD86]) HSP 1 Score: 169.474 bits (428), Expect = 1.835e-45 Identity = 96/205 (46.83%), Postives = 121/205 (59.02%), Query Frame = 0 Query: 1 MCLTEAG------LELTRLTLVDEMGRVILDELVRPSTPIIDYLTAYSGITPASLASVTTTLPSLQPTLLALLAEAPTYLVGHGLEGDLRALRIHHPYLIDTAVLYPHPKGAPYKRSLKDLAKDLLDGREVQAGHGSSGHDSYQDAVTALELALLKMTQAPGFAIPEAWAEGGREGGREGGEEPLFGCMRGATEGKGRSVGGAGD 199 MC+T LTR++LVD G+V+LDELV+P PI DYLTAYSGITP L +VTTTL +Q L +++ T LVGH L DL AL+I HPY+IDTA+LYPHP+G P K SLK L + L RE+Q GHGS+GH S +DA L+L LK + + PEA G E +F + + K V AGD Sbjct: 384 MCITSPKGVTPQVFSLTRVSLVDWDGQVVLDELVKPENPITDYLTAYSGITPTILENVTTTLGDIQKELSSIITPQ-TILVGHSLNSDLNALQITHPYIIDTALLYPHPRGPPLKSSLKWLCQKYL-SREIQKGHGSTGHSSVEDAKAVLDLVKLKTEKGKVWGTPEA------------GSESIFKRLSRSIRPKRDKVNAAGD 574
BLAST of EWM21677.1 vs. NCBI_GenBank
Match: gi|1179903545|emb|SLM37677.1| (Ribonuclease H-like domain [Umbilicaria pustulata]) HSP 1 Score: 169.474 bits (428), Expect = 3.960e-45 Identity = 87/166 (52.41%), Postives = 114/166 (68.67%), Query Frame = 0 Query: 1 MCLTEAG-LELTRLTLVDEMGRVILDELVRPSTPIIDYLTAYSGITPASLASVTTTLPSLQPTLLALLAEAPTYLVGHGLEGDLRALRIHHPYLIDTAVLYPHPKGAPYKRSLKDLAKDLLDGREVQAGHGSSGHDSYQDAVTALELALLKMTQAPGFAIPEAWAE 165 MC T+ G L+LTR+++V G V++DELV+P PIIDYLT YSGITP L VTTTL +Q LL LL T L+GH L DL AL+I HP+++DT++LY HP+G P K SLK LA+ L+ RE+Q GHG+ GHDS +DA+T L+L +K + + I EA E Sbjct: 380 MCKTQGGNLDLTRISIVGWDGSVVMDELVKPEKPIIDYLTPYSGITPTKLNPVTTTLADIQSRLLELLTPE-TILIGHSLNADLSALKITHPFIVDTSILYQHPRGPPLKSSLKWLAQKFLN-REIQKGHGTRGHDSIEDAITCLDLVKMKCEKGVKWGISEASGE 543
BLAST of EWM21677.1 vs. NCBI_GenBank
Match: gi|1002200332|gb|KXS96205.1| (hypothetical protein AC578_2827 [Mycosphaerella eumusae]) HSP 1 Score: 167.933 bits (424), Expect = 6.366e-45 Identity = 88/168 (52.38%), Postives = 110/168 (65.48%), Query Frame = 0 Query: 1 MCLTEAG------LELTRLTLVDEMGRVILDELVRPSTPIIDYLTAYSGITPASLASVTTTLPSLQPTLLALLAEAPTYLVGHGLEGDLRALRIHHPYLIDTAVLYPHPKGAPYKRSLKDLAKDLLDGREVQAGHGSSGHDSYQDAVTALELALLKMTQAPGFAIPEA 162 MC+T LTR++LVD G+V+LDELV+P PI DY+TAYSGITP L +VTTTL +Q L +L T LVGH L DL AL+I HPY+IDTA+LYPHP+G P K SLK L + L RE+Q GHGS+GH+S +DA L+L LK + + PEA Sbjct: 347 MCITSPKGVTPQVFSLTRVSLVDWDGQVVLDELVKPENPITDYVTAYSGITPTLLENVTTTLSDIQKKLSGILTPQ-TILVGHSLNSDLNALQITHPYIIDTALLYPHPRGPPLKSSLKWLCQKYL-SREIQKGHGSTGHNSVEDAKAVLDLVKLKAEKGKAWGTPEA 512
BLAST of EWM21677.1 vs. NCBI_GenBank
Match: gi|1044587904|ref|XP_017431138.1| (PREDICTED: small RNA degrading nuclease 5 isoform X1 [Vigna angularis]) HSP 1 Score: 163.31 bits (412), Expect = 1.665e-44 Identity = 85/163 (52.15%), Postives = 109/163 (66.87%), Query Frame = 0 Query: 1 MCLTEAGLELTRLTLVDEMGRVILDELVRPSTPIIDYLTAYSGITPASLASVTTTLPSLQPTLLALLAEAPTYLVGHGLEGDLRALRIHHPYLIDTAVLYPHPKGAPYKRSLKDLAKDLLDGREVQAGHGSSGHDSYQDAVTALELALLKMTQAPGFAIPEAW 163 MC+T G ELTR+TLVD G+V++D LV+PS IIDY T +SGITP L VTT+L +Q L + E T LVGH LE DL AL+I H +IDTAVLY HP+G +K++L+ LAK L RE+Q ++GHDS +DA LELALLK+ P F P ++ Sbjct: 135 MCITNEGFELTRITLVDIKGQVLIDRLVKPSNAIIDYNTRFSGITPEMLNGVTTSLRDIQELFLKFVYEE-TILVGHSLENDLLALKISHELIIDTAVLYRHPRGTSHKKALRFLAKKFL-AREIQ--QSTNGHDSIEDARATLELALLKIRNGPDFGSPPSF 293
BLAST of EWM21677.1 vs. NCBI_GenBank
Match: gi|565458758|ref|XP_006287378.1| (hypothetical protein CARUB_v10000580mg [Capsella rubella] >gi|482556084|gb|EOA20276.1| hypothetical protein CARUB_v10000580mg [Capsella rubella]) HSP 1 Score: 164.851 bits (416), Expect = 1.846e-44 Identity = 86/160 (53.75%), Postives = 108/160 (67.50%), Query Frame = 0 Query: 1 MCLTEAGLELTRLTLVDEMGRVILDELVRPSTPIIDYLTAYSGITPASLASVTTTLPSLQPTLLALLAEAPTYLVGHGLEGDLRALRIHHPYLIDTAVLYPHPKGAPYKRSLKDLAKDLLDGREVQAGHGSSGHDSYQDAVTALELALLKMTQAPGFAIP 160 MC T+ GLELTR+TLVD G+V+LD+LV+P+ PI DY T YSGIT + VTTTL +Q L L+ + T LVGH LE DL +L+I H +IDTAVLY HP+G YK L+ LAK L RE+Q SGHDS +DA A++LALLK+ P F +P Sbjct: 225 MCFTKEGLELTRVTLVDVQGQVLLDKLVKPTNPITDYNTRYSGITAVMMEGVTTTLKDIQEEFLKLVFKE-TILVGHSLENDLFSLKISHNLVIDTAVLYKHPRGRSYKTKLRILAKKFL-AREIQLSE--SGHDSAEDAKAAMDLALLKIKHGPDFGLP 380
BLAST of EWM21677.1 vs. NCBI_GenBank
Match: gi|1044587906|ref|XP_017431139.1| (PREDICTED: small RNA degrading nuclease 5 isoform X2 [Vigna angularis]) HSP 1 Score: 162.925 bits (411), Expect = 2.062e-44 Identity = 85/163 (52.15%), Postives = 109/163 (66.87%), Query Frame = 0 Query: 1 MCLTEAGLELTRLTLVDEMGRVILDELVRPSTPIIDYLTAYSGITPASLASVTTTLPSLQPTLLALLAEAPTYLVGHGLEGDLRALRIHHPYLIDTAVLYPHPKGAPYKRSLKDLAKDLLDGREVQAGHGSSGHDSYQDAVTALELALLKMTQAPGFAIPEAW 163 MC+T G ELTR+TLVD G+V++D LV+PS IIDY T +SGITP L VTT+L +Q L + E T LVGH LE DL AL+I H +IDTAVLY HP+G +K++L+ LAK L RE+Q ++GHDS +DA LELALLK+ P F P ++ Sbjct: 134 MCITNEGFELTRITLVDIKGQVLIDRLVKPSNAIIDYNTRFSGITPEMLNGVTTSLRDIQELFLKFVYE-ETILVGHSLENDLLALKISHELIIDTAVLYRHPRGTSHKKALRFLAKKFL-AREIQ--QSTNGHDSIEDARATLELALLKIRNGPDFGSPPSF 292
BLAST of EWM21677.1 vs. NCBI_GenBank
Match: gi|1148915262|ref|XP_020127200.1| (exonuclease [Diplodia corticola] >gi|1103744432|gb|OJD30940.1| exonuclease [Diplodia corticola]) HSP 1 Score: 165.622 bits (418), Expect = 4.806e-44 Identity = 87/163 (53.37%), Postives = 109/163 (66.87%), Query Frame = 0 Query: 1 MCLT-EAGLELTRLTLVDEMGRVILDELVRPSTPIIDYLTAYSGITPASLASVTTTLPSLQPTLLALLAEAPTYLVGHGLEGDLRALRIHHPYLIDTAVLYPHPKGAPYKRSLKDLAKDLLDGREVQAGHGSSGHDSYQDAVTALELALLKMTQAPGFAIPEA 162 MC T E ELTR+++VD G V+LDELV+P PI DYLT YSGIT L VTTTLP +Q LL ++ T LVGH L DL AL++ HP+++DT+ LYPHP+G P K SLK LA+ L +E+Q GHGSSGHDS +DA + LEL K + P + EA Sbjct: 322 MCKTGEQDFELTRISVVDWDGGVVLDELVKPERPITDYLTPYSGITEDMLKDVTTTLPDIQKRLLEIITPQ-TILVGHSLNSDLNALKMTHPFIVDTSFLYPHPRGRPLKCSLKWLAQKYL-SKEIQKGHGSSGHDSVEDARSTLELVKQKCEKGPLWGTSEA 482
BLAST of EWM21677.1 vs. NCBI_GenBank
Match: gi|460384034|ref|XP_004237720.1| (PREDICTED: small RNA degrading nuclease 5 [Solanum lycopersicum]) HSP 1 Score: 162.925 bits (411), Expect = 7.940e-44 Identity = 87/162 (53.70%), Postives = 112/162 (69.14%), Query Frame = 0 Query: 1 MCLTEAGLELTRLTLVDEMGRVILDELVRPSTPIIDYLTAYSGITPASLASVTTTLPSLQPTLLALLAEAPTYLVGHGLEGDLRALRIHHPYLIDTAVLYPHPKGAPYKRSLKDLAKDLLDGREVQAGHGSSGHDSYQDAVTALELALLKMTQAPGFAIPEA 162 MC+T G ELTR+TLVD G+V+LD+LV+PS IIDY T YSGIT L VTTTL +Q L L+ + T LVGH LE DL +L+I+H +IDTAVLY HP+G+ YK +L+ L++ L GRE+Q +GHDS +DA LELALLK+ P F IP++ Sbjct: 222 MCITSEGFELTRVTLVDVEGQVMLDKLVKPSNDIIDYNTRYSGITCQMLEDVTTTLKDIQEEFLKLVHKE-TILVGHSLENDLLSLKINHKLVIDTAVLYKHPRGS-YKAALRVLSRKFL-GREIQ--DSDNGHDSVEDAKATLELALLKIKNGPDFGIPQS 378 The following BLAST results are available for this feature:
BLAST of EWM21677.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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