EWM29746.1, cds899 (CDS) Nannochloropsis gaditana

Overview
NameEWM29746.1
Unique Namecds899
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:677933..678000 +
Alignment locationCM002456.1:678143..678415 +
Alignment locationCM002456.1:678560..678896 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29746.1
Productuncharacterized protein
Orig transcript idgnl|cribi|Naga_100022g8.845.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:677933..678000 +
CM002456.1supercontigCM002456.1:678143..678415 +
CM002456.1supercontigCM002456.1:678560..678896 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like
IPR010400PITH_dom
Homology
BLAST of EWM29746.1 vs. NCBI_GenBank
Match: gi|585112326|gb|EWM29746.1| (uncharacterized protein Naga_100022g8 [Nannochloropsis gaditana])

HSP 1 Score: 464.537 bits (1194), Expect = 1.097e-165
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
Query:    1 MSCRGDHIDSCGHGHDHAHGEECDHEAEDPDGQSMFAAIDTSKVRCLNENEIGACLHPFKLYNKRREPEPRLDSHDDDPELLLFVPFTRIVKLKSINIIGGHAGEGTAPTKIKLFVNRDDIDFGNCNELMAAQELELVANAAAMGDGGGIDYPLKVSKFQNVSSLTIFFSENGGGDVTSVSYVGFKGEITSVRHGVVECVYESAPQAADHKQDAGEHLMPDVAGN 225
            MSCRGDHIDSCGHGHDHAHGEECDHEAEDPDGQSMFAAIDTSKVRCLNENEIGACLHPFKLYNKRREPEPRLDSHDDDPELLLFVPFTRIVKLKSINIIGGHAGEGTAPTKIKLFVNRDDIDFGNCNELMAAQELELVANAAAMGDGGGIDYPLKVSKFQNVSSLTIFFSENGGGDVTSVSYVGFKGEITSVRHGVVECVYESAPQAADHKQDAGEHLMPDVAGN
Sbjct:    1 MSCRGDHIDSCGHGHDHAHGEECDHEAEDPDGQSMFAAIDTSKVRCLNENEIGACLHPFKLYNKRREPEPRLDSHDDDPELLLFVPFTRIVKLKSINIIGGHAGEGTAPTKIKLFVNRDDIDFGNCNELMAAQELELVANAAAMGDGGGIDYPLKVSKFQNVSSLTIFFSENGGGDVTSVSYVGFKGEITSVRHGVVECVYESAPQAADHKQDAGEHLMPDVAGN 225          
BLAST of EWM29746.1 vs. NCBI_GenBank
Match: gi|299471770|emb|CBN76991.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 222.246 bits (565), Expect = 7.978e-70
Identity = 104/189 (55.03%), Postives = 143/189 (75.66%), Query Frame = 0
Query:   28 EDPDGQSMFAAIDTSKVRCLNENEIGACLHPFKLYNKRREPEPRLDSHDDDPELLLFVPFTRIVKLKSINIIGGHAGEGTAPTKIKLFVNRDDIDFGNCNELMAAQELELVANAAAMGDGGGIDYPLKVSKFQNVSSLTIFFSENGGGDVTSVSYVGFKGEITSVRHGVVECVYESAPQAADHKQDAGE 216
            EDPDG S+F  IDT++VRCLNE+  G+ L+  K ++KRR+P+PRL+S +DDPEL+++VPFT++VK+++I++ GG  GEG+AP+ +K+FVNRDDIDFG   +L A Q LE+V ++     G  +DYP K+SK QNVS +T+F   N G D T ++Y+GFKGE T  RHGVVECVYE+ P A DHK  +GE
Sbjct:   36 EDPDGMSLFGLIDTTRVRCLNESAPGSGLNCLKPWDKRRDPQPRLESEEDDPELIIYVPFTQVVKIRAISVTGG--GEGSAPSAMKVFVNRDDIDFGLAQDLPAVQTLEMVRDSG----GVEVDYPTKLSKMQNVSDITLFVPSNFGADSTVITYLGFKGESTKFRHGVVECVYEAKPNAEDHKAPSGE 218          
BLAST of EWM29746.1 vs. NCBI_GenBank
Match: gi|953501755|emb|CEG37204.1| (Thioredoxin-like protein [Plasmopara halstedii])

HSP 1 Score: 200.29 bits (508), Expect = 3.174e-61
Identity = 105/198 (53.03%), Postives = 133/198 (67.17%), Query Frame = 0
Query:   14 GHDHAHGEECDHEAEDPDGQSMFAAIDTSKVRCLNENEIGACLHPFKLYNKRREPEPRLDSHDDDPELLLFVPFTRIVKLKSINIIGGHAGEGTAPTKIKLFVNRDDIDFGNCNELMAAQELELVANAAAMGDGGGIDYPLKVSKFQNVSSLTIFFSENGGGDVTSVSYVGFKGEITSVRHGVVECVYESAPQAADHK 211
             HDH+H      E ED DG S+F  IDTSK+R LN  +  A  HPFK  N+R++    L S++DDPEL+LF+PFT  V +KSI  I G AG+GT P ++K+F NRDDIDF N NEL+A Q+L+LV +     D   I+YPL++ KFQ VSSLT+F   + GGD T + YVG  GE    RHG+VECVYE+ PQ ADHK
Sbjct:   29 NHDHSH------EVEDADGVSLFPFIDTSKLRVLNALDPRAVSHPFKPLNERQDHSRFLASNEDDPELILFIPFTESVNIKSI-CISGCAGDGTHPKEVKIFTNRDDIDFSNANELLAQQKLDLVED-----DRANINYPLQLRKFQGVSSLTLFIQSSFGGDKTKIYYVGITGENKKWRHGIVECVYEARPQPADHK 214          
BLAST of EWM29746.1 vs. NCBI_GenBank
Match: gi|301112374|ref|XP_002905266.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262095596|gb|EEY53648.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 197.978 bits (502), Expect = 1.887e-60
Identity = 99/186 (53.23%), Postives = 128/186 (68.82%), Query Frame = 0
Query:   26 EAEDPDGQSMFAAIDTSKVRCLNENEIGACLHPFKLYNKRREPEPRLDSHDDDPELLLFVPFTRIVKLKSINIIGGHAGEGTAPTKIKLFVNRDDIDFGNCNELMAAQELELVANAAAMGDGGGIDYPLKVSKFQNVSSLTIFFSENGGGDVTSVSYVGFKGEITSVRHGVVECVYESAPQAADHK 211
            E ED +G S++  IDTSK+R LN  +     HPFK +++R++    L S+DDDPE++LF+PFT  V +KSI  I G AG+GT P  +KLF NR+DIDF N NEL A Q+L+L+ +     D   IDYPL+V KFQ VSSLT+F  ++ GGD T + Y+G KGE    RHGVVECVYE+ PQ ADHK
Sbjct:   29 EVEDANGDSLYPFIDTSKLRVLNALDPQTAAHPFKPFHERQDRSRFLASNDDDPEMILFIPFTEAVSIKSI-CISGSAGDGTHPKAVKLFANREDIDFSNANELPAQQKLDLIED-----DTANIDYPLQVRKFQGVSSLTLFIEDSYGGDETKIYYIGLKGESKKWRHGVVECVYEARPQPADHK 208          
BLAST of EWM29746.1 vs. NCBI_GenBank
Match: gi|1214683144|gb|OWZ01150.1| (hypothetical protein PHMEG_00027525 [Phytophthora megakarya])

HSP 1 Score: 196.823 bits (499), Expect = 5.153e-60
Identity = 99/186 (53.23%), Postives = 129/186 (69.35%), Query Frame = 0
Query:   26 EAEDPDGQSMFAAIDTSKVRCLNENEIGACLHPFKLYNKRREPEPRLDSHDDDPELLLFVPFTRIVKLKSINIIGGHAGEGTAPTKIKLFVNRDDIDFGNCNELMAAQELELVANAAAMGDGGGIDYPLKVSKFQNVSSLTIFFSENGGGDVTSVSYVGFKGEITSVRHGVVECVYESAPQAADHK 211
            E ED +G S++  IDTSK+R LN  +  A  HPFK +++R++    L S+DDDPE++LF+PFT  V +KSI  I G +G+GT P  +KLF NRDDIDF N NEL A Q+L+LV +     D   IDYPL+V KFQ VSS+T+FF ++ GG  T + Y+G KGE    RHGVVECVYE+ PQ +DHK
Sbjct:   27 EVEDANGDSLYPFIDTSKLRVLNALDPQAAAHPFKPFHERQDHSRFLASNDDDPEMILFIPFTEAVSIKSI-CISGSSGDGTHPKAVKLFTNRDDIDFSNANELPAQQKLDLVED-----DTANIDYPLQVRKFQGVSSVTLFFEDSYGGVETKIYYIGLKGESKKWRHGVVECVYEARPQPSDHK 206          
BLAST of EWM29746.1 vs. NCBI_GenBank
Match: gi|675174579|ref|XP_008896174.1| (hypothetical protein PPTG_04102 [Phytophthora parasitica INRA-310] >gi|566013213|gb|ETI36124.1| hypothetical protein F443_17684 [Phytophthora parasitica P1569] >gi|566013214|gb|ETI36125.1| hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|567950636|gb|ETK76344.1| hypothetical protein L915_17223 [Phytophthora parasitica] >gi|567950637|gb|ETK76345.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567979306|gb|ETL29787.1| hypothetical protein L916_17114 [Phytophthora parasitica] >gi|567979307|gb|ETL29788.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568008794|gb|ETL83009.1| hypothetical protein L917_16942 [Phytophthora parasitica] >gi|568008795|gb|ETL83010.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568038716|gb|ETM36236.1| hypothetical protein L914_17023 [Phytophthora parasitica] >gi|568038717|gb|ETM36237.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568103861|gb|ETN18518.1| hypothetical protein PPTG_04102 [Phytophthora parasitica INRA-310] >gi|570316894|gb|ETO64842.1| hypothetical protein F444_17725 [Phytophthora parasitica P1976] >gi|570316895|gb|ETO64843.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570940692|gb|ETP05949.1| hypothetical protein F441_17560 [Phytophthora parasitica CJ01A1] >gi|570940693|gb|ETP05950.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >gi|570970943|gb|ETP34062.1| hypothetical protein F442_17541 [Phytophthora parasitica P10297] >gi|570970944|gb|ETP34063.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 194.897 bits (494), Expect = 3.097e-59
Identity = 98/186 (52.69%), Postives = 129/186 (69.35%), Query Frame = 0
Query:   26 EAEDPDGQSMFAAIDTSKVRCLNENEIGACLHPFKLYNKRREPEPRLDSHDDDPELLLFVPFTRIVKLKSINIIGGHAGEGTAPTKIKLFVNRDDIDFGNCNELMAAQELELVANAAAMGDGGGIDYPLKVSKFQNVSSLTIFFSENGGGDVTSVSYVGFKGEITSVRHGVVECVYESAPQAADHK 211
            E ED +G S++  IDTSK+R LN  +  A  HPFK +++R++    L S++DDPE++LF+PFT  V +KSI  I G AG+GT P  +KLF NR+DIDF N NEL A Q+L+LV +     D   IDYPL+V KFQ VS+LT+F  ++ GGD T + Y+G KGE    RHGVVECVYE+ PQ +DHK
Sbjct:   29 EVEDANGDSLYPFIDTSKLRVLNALDPQAAAHPFKPFHERQDRSRFLASNEDDPEVILFIPFTEAVSIKSI-CISGSAGDGTHPKAVKLFTNREDIDFSNANELPAQQKLDLVED-----DTANIDYPLQVRKFQGVSNLTLFIEDSYGGDETKIYYIGLKGENKKWRHGVVECVYEARPQPSDHK 208          
BLAST of EWM29746.1 vs. NCBI_GenBank
Match: gi|695396612|ref|XP_009521516.1| (hypothetical protein PHYSODRAFT_487097 [Phytophthora sojae] >gi|348686413|gb|EGZ26228.1| hypothetical protein PHYSODRAFT_487097 [Phytophthora sojae])

HSP 1 Score: 191.815 bits (486), Expect = 4.862e-58
Identity = 97/186 (52.15%), Postives = 128/186 (68.82%), Query Frame = 0
Query:   26 EAEDPDGQSMFAAIDTSKVRCLNENEIGACLHPFKLYNKRREPEPRLDSHDDDPELLLFVPFTRIVKLKSINIIGGHAGEGTAPTKIKLFVNRDDIDFGNCNELMAAQELELVANAAAMGDGGGIDYPLKVSKFQNVSSLTIFFSENGGGDVTSVSYVGFKGEITSVRHGVVECVYESAPQAADHK 211
            E ED +G S++  IDTSKVR LN  +  A  +PFK +++R++    L S++DDPE++LF+PFT  V +KSI  I G AG+G  P  +KLF NRDDIDF N NEL   Q L+L+ + +A      IDYPL+V KFQ VSS+T+FF ++ GGD T + Y+G KGE    RHGVVECVYE+ PQ +DHK
Sbjct:   29 EVEDANGDSLYPFIDTSKVRVLNALDPEAASNPFKPFHERQDHSRFLISNEDDPEMILFIPFTEAVSIKSI-CISGSAGDGEHPKAVKLFTNRDDIDFSNANELPPQQRLDLIEDESA-----NIDYPLQVRKFQGVSSVTLFFEDSYGGDETKIYYIGLKGESKKWRHGVVECVYEARPQPSDHK 208          
BLAST of EWM29746.1 vs. NCBI_GenBank
Match: gi|813110650|ref|XP_012194957.1| (hypothetical protein SPRG_01347 [Saprolegnia parasitica CBS 223.65] >gi|641540291|gb|KDO34073.1| hypothetical protein SPRG_01347 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 191.045 bits (484), Expect = 8.028e-58
Identity = 101/195 (51.79%), Postives = 125/195 (64.10%), Query Frame = 0
Query:   31 DGQSMFAAIDTSKVRCLNENEIGACLHPFKLYNKRREPEPRLDSHDDDPELLLFVPFTRIVKLKSINIIGGHAGEGTAPTKIKLFVNRDDIDFGNCNELMAAQELELVANAAAMGDGGGIDYPLKVSKFQNVSSLTIFFSENGGGDVTSVSYVGFKGEITSVRHGVVECVYESAPQAADHKQDAGEHLMPDVAGN 225
            DG S+F  IDT+KVRCLN  +     HPFK    +R     LDS+DDDPEL+L++PFT  V +KSI I GG   +G  PT +KLFVNR+DIDF N  EL A Q+LELV +  A      IDYPL + KFQ +SSL++FF  +  GD T V Y+G KGE    +HGVVECVYES PQ +DHK       +PD  G+
Sbjct:   26 DGDSLFQFIDTTKVRCLNALDERQKTHPFKSAADKRSRATYLDSNDDDPELILYIPFTEAVSVKSICIAGG--ADGLHPTSVKLFVNREDIDFSNATELPATQKLELVEDYDA-----NIDYPLSLRKFQGISSLSLFFENSVDGDQTRVYYIGLKGESKKWKHGVVECVYESRPQLSDHK-------VPDATGS 206          
BLAST of EWM29746.1 vs. NCBI_GenBank
Match: gi|669159768|ref|XP_008615446.1| (hypothetical protein SDRG_11194, partial [Saprolegnia diclina VS20] >gi|530732765|gb|EQC31007.1| hypothetical protein SDRG_11194, partial [Saprolegnia diclina VS20])

HSP 1 Score: 189.504 bits (480), Expect = 3.105e-57
Identity = 100/195 (51.28%), Postives = 126/195 (64.62%), Query Frame = 0
Query:   31 DGQSMFAAIDTSKVRCLNENEIGACLHPFKLYNKRREPEPRLDSHDDDPELLLFVPFTRIVKLKSINIIGGHAGEGTAPTKIKLFVNRDDIDFGNCNELMAAQELELVANAAAMGDGGGIDYPLKVSKFQNVSSLTIFFSENGGGDVTSVSYVGFKGEITSVRHGVVECVYESAPQAADHKQDAGEHLMPDVAGN 225
            +G+S+F  IDTSKVRCLN  +     HPFK    +R     LDS++DDPEL+L++PFT  V +KSI I GG   +G  PT +KLFVNR+DIDF N  EL A Q+LELV +  A      IDYPL + KFQ +SSL++FF  +  GD T V Y+G KGE    +HGVVECVYES PQ +DHK       +PD  G+
Sbjct:   24 EGESLFQYIDTSKVRCLNALDERQKTHPFKSAADKRSRATYLDSNEDDPELILYIPFTEAVSVKSICIAGG--ADGLHPTSVKLFVNREDIDFTNATELPATQKLELVEDYDA-----NIDYPLSLRKFQGISSLSLFFENSVDGDQTRVYYIGLKGESKKWKHGVVECVYESRPQLSDHK-------VPDATGS 204          
BLAST of EWM29746.1 vs. NCBI_GenBank
Match: gi|1173936785|gb|OQR87671.1| (hypothetical protein ACHHYP_08173 [Achlya hypogyna])

HSP 1 Score: 187.193 bits (474), Expect = 2.657e-56
Identity = 96/185 (51.89%), Postives = 124/185 (67.03%), Query Frame = 0
Query:   27 AEDPDGQSMFAAIDTSKVRCLNENEIGACLHPFKLYNKRREPEPRLDSHDDDPELLLFVPFTRIVKLKSINIIGGHAGEGTAPTKIKLFVNRDDIDFGNCNELMAAQELELVANAAAMGDGGGIDYPLKVSKFQNVSSLTIFFSENGGGDVTSVSYVGFKGEITSVRHGVVECVYESAPQAADHK 211
             ED +G S+F  IDTSKVRCLN  +     HPFK    ++  +  LDS++DDPEL+L++PFT  V +KSI I GG   +G  PT +KLF NR+DIDF N +EL A Q+L+LV +  A      IDYPL++ KFQ +SSLT+FF  +  GD T + Y+G KGE    +HGVVECVYES PQ +DHK
Sbjct:   24 VEDAEGDSLFRFIDTSKVRCLNALDERQKTHPFKSAANKKARDTYLDSNEDDPELILYIPFTEAVSVKSICIAGGI--DGLHPTSVKLFTNREDIDFSNASELPAVQKLDLVEDYDAT-----IDYPLQLRKFQGISSLTLFFENSVDGDQTRIYYIGLKGESKKWKHGVVECVYESRPQMSDHK 201          
The following BLAST results are available for this feature:
BLAST of EWM29746.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112326|gb|EWM29746.1|1.097e-165100.00uncharacterized protein Naga_100022g8 [Nannochloro... [more]
gi|299471770|emb|CBN76991.1|7.978e-7055.03conserved unknown protein [Ectocarpus siliculosus][more]
gi|953501755|emb|CEG37204.1|3.174e-6153.03Thioredoxin-like protein [Plasmopara halstedii][more]
gi|301112374|ref|XP_002905266.1|1.887e-6053.23conserved hypothetical protein [Phytophthora infes... [more]
gi|1214683144|gb|OWZ01150.1|5.153e-6053.23hypothetical protein PHMEG_00027525 [Phytophthora ... [more]
gi|675174579|ref|XP_008896174.1|3.097e-5952.69hypothetical protein PPTG_04102 [Phytophthora para... [more]
gi|695396612|ref|XP_009521516.1|4.862e-5852.15hypothetical protein PHYSODRAFT_487097 [Phytophtho... [more]
gi|813110650|ref|XP_012194957.1|8.028e-5851.79hypothetical protein SPRG_01347 [Saprolegnia paras... [more]
gi|669159768|ref|XP_008615446.1|3.105e-5751.28hypothetical protein SDRG_11194, partial [Saproleg... [more]
gi|1173936785|gb|OQR87671.1|2.657e-5651.89hypothetical protein ACHHYP_08173 [Achlya hypogyna... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna899rna899Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications