EWM21689.1, cds8984 (CDS) Nannochloropsis gaditana

Overview
NameEWM21689.1
Unique Namecds8984
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:109293..109631 +
Alignment locationKK037251.1:109819..110046 +
Alignment locationKK037251.1:110335..110451 +
Alignment locationKK037251.1:110626..110704 +
Alignment locationKK037251.1:110848..110968 +

Link to JBrowse

Properties
Property NameValue
End range.
End range110968
Protein idEWM21689.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100939g1.2052.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:109293..109631 +
KK037251.1supercontigKK037251.1:109819..110046 +
KK037251.1supercontigKK037251.1:110335..110451 +
KK037251.1supercontigKK037251.1:110626..110704 +
KK037251.1supercontigKK037251.1:110848..110968 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM21689.1 vs. NCBI_GenBank
Match: gi|585101974|gb|EWM21689.1| (hypothetical protein Naga_100939g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 595.89 bits (1535), Expect = 0.000e+0
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0 
Query:    1 MTSACLPAPPKSLRFIGFCLAVHCLAQAFIFPTRSFSSLPRAVAPVTRRSAAFIELGEKTRGGGGSDEEGGSLDGRSRGGGGGGGRATVITERAWNTSTLGTLPSDLESLSSSICDCALTAIANGEMGLTVHAGGEFDPRNRYHDPYQLTSLVVGLAGKLSVLGATRVLFSGPEALESSLDHMRQFIQLEAQKEQEELATVKQVRQEVQAKFPGTKLPEMPAEMAKEKLVRLRERQRLADRVLFGSLLGDYRLTGDNMMDLETAPSRVFGEIDLDQDRLFIVVAPGNSPVVRSA 294
            MTSACLPAPPKSLRFIGFCLAVHCLAQAFIFPTRSFSSLPRAVAPVTRRSAAFIELGEKTRGGGGSDEEGGSLDGRSRGGGGGGGRATVITERAWNTSTLGTLPSDLESLSSSICDCALTAIANGEMGLTVHAGGEFDPRNRYHDPYQLTSLVVGLAGKLSVLGATRVLFSGPEALESSLDHMRQFIQLEAQKEQEELATVKQVRQEVQAKFPGTKLPEMPAEMAKEKLVRLRERQRLADRVLFGSLLGDYRLTGDNMMDLETAPSRVFGEIDLDQDRLFIVVAPGNSPVVRSA
Sbjct:    1 MTSACLPAPPKSLRFIGFCLAVHCLAQAFIFPTRSFSSLPRAVAPVTRRSAAFIELGEKTRGGGGSDEEGGSLDGRSRGGGGGGGRATVITERAWNTSTLGTLPSDLESLSSSICDCALTAIANGEMGLTVHAGGEFDPRNRYHDPYQLTSLVVGLAGKLSVLGATRVLFSGPEALESSLDHMRQFIQLEAQKEQEELATVKQVRQEVQAKFPGTKLPEMPAEMAKEKLVRLRERQRLADRVLFGSLLGDYRLTGDNMMDLETAPSRVFGEIDLDQDRLFIVVAPGNSPVVRSA 294
The following BLAST results are available for this feature:
BLAST of EWM21689.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Position :
0
Zoom :
x 1
01SequenceEWM21689.1
Match NameE-valueIdentityDescription
gi|585101974|gb|EWM21689.1|0.000e+0100.00hypothetical protein Naga_100939g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9014rna9014Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications