EWM21702.1, cds8971 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21702.1 vs. NCBI_GenBank
Match: gi|585102000|gb|EWM21702.1| (Protein of unknown function DUF2237 [Nannochloropsis gaditana]) HSP 1 Score: 530.406 bits (1365), Expect = 0.000e+0 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0 Query: 1 MRPCARKADIKSFTTIASLFLLSSLSTRSAYGFLALRQASASFNVCVAGATPSGKADEKPTPPQGQSAFVRSLFTDVAERRDKEQASIKAEAKAAAAQRLEAAKMRGEINVLGGPLELCGTDPMTGFTREGCCTTGPMDLGSHTVCAVVSDDFLRYSKARGNDLMTPRPEYSFPGLKPGDRWCLCASRWAEAYDEGVACAVDLKATHIKALDVCNLNALIEHALEPPPSQEGEGAGGGEGDEKEQSGAQKASAGKKEDL 259 MRPCARKADIKSFTTIASLFLLSSLSTRSAYGFLALRQASASFNVCVAGATPSGKADEKPTPPQGQSAFVRSLFTDVAERRDKEQASIKAEAKAAAAQRLEAAKMRGEINVLGGPLELCGTDPMTGFTREGCCTTGPMDLGSHTVCAVVSDDFLRYSKARGNDLMTPRPEYSFPGLKPGDRWCLCASRWAEAYDEGVACAVDLKATHIKALDVCNLNALIEHALEPPPSQEGEGAGGGEGDEKEQSGAQKASAGKKEDL Sbjct: 1 MRPCARKADIKSFTTIASLFLLSSLSTRSAYGFLALRQASASFNVCVAGATPSGKADEKPTPPQGQSAFVRSLFTDVAERRDKEQASIKAEAKAAAAQRLEAAKMRGEINVLGGPLELCGTDPMTGFTREGCCTTGPMDLGSHTVCAVVSDDFLRYSKARGNDLMTPRPEYSFPGLKPGDRWCLCASRWAEAYDEGVACAVDLKATHIKALDVCNLNALIEHALEPPPSQEGEGAGGGEGDEKEQSGAQKASAGKKEDL 259
BLAST of EWM21702.1 vs. NCBI_GenBank
Match: gi|504251271|ref|WP_014438373.1| (DUF2237 domain-containing protein [Phycisphaera mikurensis] >gi|381388349|dbj|BAM05165.1| hypothetical protein PSMK_30060 [Phycisphaera mikurensis NBRC 102666]) HSP 1 Score: 173.711 bits (439), Expect = 1.032e-51 Identity = 80/114 (70.18%), Postives = 89/114 (78.07%), Query Frame = 0 Query: 110 NVLGGPLELCGTDPMTGFTREGCCTTGPMDLGSHTVCAVVSDDFLRYSKARGNDLMTPRPEYSFPGLKPGDRWCLCASRWAEAYDEGVACAVDLKATHIKALDVCNLNALIEHA 223 NVLGGPL +C DP+TGF+R GCC TGP DLGSHTVCAV+++DFL ++K GNDL TPRPEY FPGLKPGDRWCLCA RWAEA G A VDL ATH KAL+V L L EHA Sbjct: 11 NVLGGPLAICSKDPLTGFSRSGCCETGPQDLGSHTVCAVMTEDFLVFTKQAGNDLTTPRPEYRFPGLKPGDRWCLCAGRWAEAEAAGRAPRVDLAATHAKALEVVALETLREHA 124
BLAST of EWM21702.1 vs. NCBI_GenBank
Match: gi|1194617397|ref|WP_085949675.1| (DUF2237 domain-containing protein [Frankia alni]) HSP 1 Score: 173.711 bits (439), Expect = 1.098e-51 Identity = 81/123 (65.85%), Postives = 96/123 (78.05%), Query Frame = 0 Query: 105 MRGEINVLGGPLELCGTDPMTGFTREGCCTTGPMDLGSHTVCAVVSDDFLRYSKARGNDLMTPRPEYSFPGLKPGDRWCLCASRWAEAYDEGVACAVDLKATHIKALDVCNLNALIEHALEPP 227 M E NVLGG LE CGTDP+TGF R+GCC+TGP DLG+HTVCAVV+ DFLR+ + GNDL TPRPEYSFPGL+PGDRWC+ A RW +AYD GVA V L +TH +AL+V L AL HA++ P Sbjct: 1 MAVERNVLGGELEPCGTDPVTGFYRDGCCSTGPEDLGNHTVCAVVTADFLRHQRQVGNDLSTPRPEYSFPGLRPGDRWCVVAVRWLQAYDAGVAAPVVLASTHERALEVIPLEALRAHAVDVP 123
BLAST of EWM21702.1 vs. NCBI_GenBank
Match: gi|1125231931|gb|OLB79803.1| (hypothetical protein AUI14_09155 [Actinobacteria bacterium 13_2_20CM_2_71_6]) HSP 1 Score: 173.711 bits (439), Expect = 1.551e-51 Identity = 79/123 (64.23%), Postives = 97/123 (78.86%), Query Frame = 0 Query: 105 MRGEINVLGGPLELCGTDPMTGFTREGCCTTGPMDLGSHTVCAVVSDDFLRYSKARGNDLMTPRPEYSFPGLKPGDRWCLCASRWAEAYDEGVACAVDLKATHIKALDVCNLNALIEHALEPP 227 M G+ NVLGG LE CGTDP+TGF R+GCC+TGP DLGSHTVCAVV+ +FL + + GNDL+TPRPE+ FPGL+PGDRWC+ A RW EAY+ GVA V L ATH +A+D+ L AL EHA++ P Sbjct: 1 MTGDRNVLGGELEPCGTDPVTGFYRDGCCSTGPEDLGSHTVCAVVTAEFLAHQRRTGNDLITPRPEFRFPGLQPGDRWCVVAIRWLEAYEAGVAAPVVLAATHARAVDIVPLEALREHAVDVP 123
BLAST of EWM21702.1 vs. NCBI_GenBank
Match: gi|768713788|ref|WP_044883107.1| (MULTISPECIES: DUF2237 domain-containing protein [Frankia] >gi|765354434|gb|KJE25164.1| hypothetical protein FF36_00297 [Frankia sp. CpI1-S] >gi|941946734|gb|KQC37712.1| hypothetical protein UK82_13865 [Frankia sp. ACN1ag] >gi|944478291|gb|KQM08020.1| hypothetical protein FF86_1001276 [Frankia sp. CpI1-P]) HSP 1 Score: 173.326 bits (438), Expect = 2.018e-51 Identity = 81/123 (65.85%), Postives = 95/123 (77.24%), Query Frame = 0 Query: 105 MRGEINVLGGPLELCGTDPMTGFTREGCCTTGPMDLGSHTVCAVVSDDFLRYSKARGNDLMTPRPEYSFPGLKPGDRWCLCASRWAEAYDEGVACAVDLKATHIKALDVCNLNALIEHALEPP 227 M E NVLGG LE CGTDP+TGF R+GCC+TGP DLGSHTVCAVV+ DFLR+ + GNDL TPRPEYSFPGL+PGDRWC+ A RW +AYD G A V L +TH +AL+V L AL HA++ P Sbjct: 1 MAEERNVLGGELEPCGTDPVTGFYRDGCCSTGPEDLGSHTVCAVVTADFLRHQRQVGNDLSTPRPEYSFPGLRPGDRWCVVAVRWLQAYDAGAAAPVVLASTHERALEVIPLEALRAHAVDVP 123
BLAST of EWM21702.1 vs. NCBI_GenBank
Match: gi|499924207|ref|WP_011604941.1| (DUF2237 domain-containing protein [Frankia sp. AvcI1] >gi|111150745|emb|CAJ62447.1| conserved hypothetical protein [Frankia alni ACN14a]) HSP 1 Score: 172.94 bits (437), Expect = 2.329e-51 Identity = 80/120 (66.67%), Postives = 95/120 (79.17%), Query Frame = 0 Query: 108 EINVLGGPLELCGTDPMTGFTREGCCTTGPMDLGSHTVCAVVSDDFLRYSKARGNDLMTPRPEYSFPGLKPGDRWCLCASRWAEAYDEGVACAVDLKATHIKALDVCNLNALIEHALEPP 227 E NVLGG LE CGTDP+TGF R+GCC+TGP DLG+HTVCAVV+ DFLR+ + GNDL TPRPEYSFPGL+PGDRWC+ A RW +AYD GVA V L +TH +AL+V L AL HA++ P Sbjct: 2 ERNVLGGELEPCGTDPVTGFYRDGCCSTGPEDLGNHTVCAVVTADFLRHQRQVGNDLSTPRPEYSFPGLRPGDRWCVVAVRWLQAYDAGVAAPVVLASTHERALEVIPLEALRAHAVDVP 121
BLAST of EWM21702.1 vs. NCBI_GenBank
Match: gi|764487865|ref|WP_044389048.1| (DUF2237 domain-containing protein [Marinobacter excellens] >gi|938295099|gb|KPQ29032.1| hypothetical protein HLUCCX14_08155 [Marinobacter excellens HL-55]) HSP 1 Score: 172.555 bits (436), Expect = 3.727e-51 Identity = 78/115 (67.83%), Postives = 88/115 (76.52%), Query Frame = 0 Query: 109 INVLGGPLELCGTDPMTGFTREGCCTTGPMDLGSHTVCAVVSDDFLRYSKARGNDLMTPRPEYSFPGLKPGDRWCLCASRWAEAYDEGVACAVDLKATHIKALDVCNLNALIEHA 223 +NVLG LE CGTDP TGF R+GCC TGP DLG+HTVC++V+ DFL YSKARGNDL TPRPE+ FPGLKPGD WCLCA RW EA++ A V L+ATH ALDVC LN L H Sbjct: 7 LNVLGEKLETCGTDPKTGFYRDGCCNTGPDDLGNHTVCSIVTADFLEYSKARGNDLSTPRPEFGFPGLKPGDSWCLCAGRWQEAFEANSAPRVKLRATHQNALDVCQLNDLKAHT 121
BLAST of EWM21702.1 vs. NCBI_GenBank
Match: gi|1094648574|emb|SET45163.1| (hypothetical protein SAMN04487962_1104 [Marinobacter segnicrescens]) HSP 1 Score: 172.17 bits (435), Expect = 4.476e-51 Identity = 78/117 (66.67%), Postives = 94/117 (80.34%), Query Frame = 0 Query: 109 INVLGGPLELCGTDPMTGFTREGCCTTGPMDLGSHTVCAVVSDDFLRYSKARGNDLMTPRPEYSFPGLKPGDRWCLCASRWAEAYDEGVACAVDLKATHIKALDVCNLNALIEHALE 225 INVLG PLE CGTDP+TGF R+GCC TGP D GSHTVCAVV+D+FL +S++RGNDL TPRPE+ FPGL+PGD WCLCA+RW EA + G A V LKATH ALD+C+L L H+++ Sbjct: 9 INVLGEPLEDCGTDPVTGFFRDGCCNTGPEDFGSHTVCAVVTDEFLAFSRSRGNDLSTPRPEFGFPGLRPGDGWCLCAARWREALEAGCAPRVRLKATHRAALDICDLADLKRHSVD 125
BLAST of EWM21702.1 vs. NCBI_GenBank
Match: gi|1099916055|emb|SFI99953.1| (hypothetical protein SAMN05421835_102457 [Amycolatopsis sacchari]) HSP 1 Score: 172.17 bits (435), Expect = 4.663e-51 Identity = 80/123 (65.04%), Postives = 97/123 (78.86%), Query Frame = 0 Query: 105 MRGEINVLGGPLELCGTDPMTGFTREGCCTTGPMDLGSHTVCAVVSDDFLRYSKARGNDLMTPRPEYSFPGLKPGDRWCLCASRWAEAYDEGVACAVDLKATHIKALDVCNLNALIEHALEPP 227 M + NVLGG LE CG+DP+TGF REGCCTTGP DLG+HTVCAVV+ +FL YS GNDL+TPRPEY FPGL+ GDRWC+ A+RW EAY+ GVA V L +TH +AL+V +L+AL EHA + P Sbjct: 1 MANDRNVLGGELEPCGSDPVTGFYREGCCTTGPDDLGNHTVCAVVTKEFLEYSLKVGNDLLTPRPEYDFPGLQAGDRWCIVAARWQEAYEAGVAPPVALASTHERALEVVDLDALREHAADVP 123
BLAST of EWM21702.1 vs. NCBI_GenBank
Match: gi|1125510355|gb|OLE29561.1| (hypothetical protein AUG44_03665 [Actinobacteria bacterium 13_1_20CM_3_71_11]) HSP 1 Score: 171.785 bits (434), Expect = 6.603e-51 Identity = 81/130 (62.31%), Postives = 97/130 (74.62%), Query Frame = 0 Query: 105 MRGEINVLGGPLELCGTDPMTGFTREGCCTTGPMDLGSHTVCAVVSDDFLRYSKARGNDLMTPRPEYSFPGLKPGDRWCLCASRWAEAYDEGVACAVDLKATHIKALDVCNLNALIEHALEPPPSQEGEG 234 M + NVLGG LE CGTDP+TGF R+GCCTTGP D+GSHTVCAVV+ +FL + + GNDL+TPRPEY FPGL+PGDRWC+ A RW EAY+ G A V L ATH +ALDV L AL +HA++ PP G Sbjct: 1 MTEDRNVLGGELEPCGTDPVTGFYRDGCCTTGPEDIGSHTVCAVVTAEFLAHQQQVGNDLVTPRPEYRFPGLRPGDRWCVVAVRWLEAYEAGRAAPVVLAATHARALDVIPLEALRKHAVDVPPDLSSLG 130 The following BLAST results are available for this feature:
BLAST of EWM21702.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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