EWM21709.1, cds8965 (CDS) Nannochloropsis gaditana

Overview
NameEWM21709.1
Unique Namecds8965
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:43440..43544 -
Alignment locationKK037251.1:43103..43194 -
Alignment locationKK037251.1:42738..42957 -
Alignment locationKK037251.1:42380..42466 -
Alignment locationKK037251.1:42211..42273 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21709.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100775g3.7634.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:43440..43544 -
KK037251.1supercontigKK037251.1:43103..43194 -
KK037251.1supercontigKK037251.1:42738..42957 -
KK037251.1supercontigKK037251.1:42380..42466 -
KK037251.1supercontigKK037251.1:42211..42273 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21709.1 vs. NCBI_GenBank
Match: gi|585102022|gb|EWM21709.1| (hypothetical protein Naga_100775g3 [Nannochloropsis gaditana])

HSP 1 Score: 375.941 bits (964), Expect = 8.463e-132
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0 
Query:    1 MHAASLPRPSLTWERERKLDLQLQLCGVAGHAGAQTLNLHGNRLSPFGASQLFTSLVKHRVMPALRRLDVRNTHVGADGLGSVLKILSLRAPSPSSSSSFPATTPNSPPLGTLRHLYVSLMHGKDEERQLETVQALLLQASQSLPRLRMLAILDEGEILDADTENRLKVTNSAILVRHHTRALPTPAV 188
            MHAASLPRPSLTWERERKLDLQLQLCGVAGHAGAQTLNLHGNRLSPFGASQLFTSLVKHRVMPALRRLDVRNTHVGADGLGSVLKILSLRAPSPSSSSSFPATTPNSPPLGTLRHLYVSLMHGKDEERQLETVQALLLQASQSLPRLRMLAILDEGEILDADTENRLKVTNSAILVRHHTRALPTPAV
Sbjct:    1 MHAASLPRPSLTWERERKLDLQLQLCGVAGHAGAQTLNLHGNRLSPFGASQLFTSLVKHRVMPALRRLDVRNTHVGADGLGSVLKILSLRAPSPSSSSSFPATTPNSPPLGTLRHLYVSLMHGKDEERQLETVQALLLQASQSLPRLRMLAILDEGEILDADTENRLKVTNSAILVRHHTRALPTPAV 188
The following BLAST results are available for this feature:
BLAST of EWM21709.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102022|gb|EWM21709.1|8.463e-132100.00hypothetical protein Naga_100775g3 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8995rna8995Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications