EWM21712.1, cds8962 (CDS) Nannochloropsis gaditana

Overview
NameEWM21712.1
Unique Namecds8962
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:34436..34684 +
Alignment locationKK037251.1:34771..34870 +
Alignment locationKK037251.1:35042..35178 +
Alignment locationKK037251.1:35299..35420 +
Alignment locationKK037251.1:35766..36102 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21712.1
Productk homeostasis protein kha1
Orig transcript idgnl|cribi|Naga_100183g11.8959.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:34436..34684 +
KK037251.1supercontigKK037251.1:34771..34870 +
KK037251.1supercontigKK037251.1:35042..35178 +
KK037251.1supercontigKK037251.1:35299..35420 +
KK037251.1supercontigKK037251.1:35766..36102 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0055085transmembrane transport
GO:0006812cation transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0015299solute:proton antiporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR006153Cation/H_exchanger
Homology
BLAST of EWM21712.1 vs. NCBI_GenBank
Match: gi|585102029|gb|EWM21712.1| (k+ homeostasis protein kha1 [Nannochloropsis gaditana])

HSP 1 Score: 615.535 bits (1586), Expect = 0.000e+0
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0
Query:    1 MGPTAGVVAASAGATTPADVFGALGIGGPPIEAAMALHRWLQGEEAGLDEPRPRSSSIYFQPEGGIMSGHGVLEDTLSLFMVQAVIIITVTRLLSLGTKCLKQPRVIMEVVGGILLGPSALGHIPGYLDTVFPSQSLGYLALVANIGLVLYLFLVGVELDPEVLRRNGHKAVSIAVVGIAIPFGMGCLISPLLFNKLLVKEPGYEGAAYSSFLVFVGVAMSITAFPVLARILLESKLILSTAGTPPLPLYLEICARTSRPPGSATLASEPQALLSLPPSLPPSRRNDHGRRGPERRDRLVLAGLGAFHRPLRGE 314
            MGPTAGVVAASAGATTPADVFGALGIGGPPIEAAMALHRWLQGEEAGLDEPRPRSSSIYFQPEGGIMSGHGVLEDTLSLFMVQAVIIITVTRLLSLGTKCLKQPRVIMEVVGGILLGPSALGHIPGYLDTVFPSQSLGYLALVANIGLVLYLFLVGVELDPEVLRRNGHKAVSIAVVGIAIPFGMGCLISPLLFNKLLVKEPGYEGAAYSSFLVFVGVAMSITAFPVLARILLESKLILSTAGTPPLPLYLEICARTSRPPGSATLASEPQALLSLPPSLPPSRRNDHGRRGPERRDRLVLAGLGAFHRPLRGE
Sbjct:    1 MGPTAGVVAASAGATTPADVFGALGIGGPPIEAAMALHRWLQGEEAGLDEPRPRSSSIYFQPEGGIMSGHGVLEDTLSLFMVQAVIIITVTRLLSLGTKCLKQPRVIMEVVGGILLGPSALGHIPGYLDTVFPSQSLGYLALVANIGLVLYLFLVGVELDPEVLRRNGHKAVSIAVVGIAIPFGMGCLISPLLFNKLLVKEPGYEGAAYSSFLVFVGVAMSITAFPVLARILLESKLILSTAGTPPLPLYLEICARTSRPPGSATLASEPQALLSLPPSLPPSRRNDHGRRGPERRDRLVLAGLGAFHRPLRGE 314          
BLAST of EWM21712.1 vs. NCBI_GenBank
Match: gi|909126825|gb|KNE54136.1| (hypothetical protein AMAG_17624 [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 179.874 bits (455), Expect = 2.483e-47
Identity = 91/167 (54.49%), Postives = 124/167 (74.25%), Query Frame = 0
Query:   77 LSLFMVQAVIIITVTRLLSLGTKCLKQPRVIMEVVGGILLGPSALGHIPGYLDTVFPSQSLGYLALVANIGLVLYLFLVGVELDPEVLRRNGHKAVSIAVVGIAIPFGMGCLISPLLFNKLLVKEPGYEGAAYSSFLVFVGVAMSITAFPVLARILLESKLILSTAG 243
            L LF+VQ ++++ +TRLLS+  K  +QPRVI EV+GGILLGPSALG IPG+   +FP+ SLG   L+AN GL+LYLF+VG+ELDP ++  N  K+V+I+V GIA+PFG G  +S  L++ L+ K+       +SSF +F+GVAMSITAFPVLARIL E+ L+ +  G
Sbjct:  236 LPLFLVQVIVVVLMTRLLSMVLKYFRQPRVIAEVIGGILLGPSALGQIPGFTKALFPATSLGMFGLIANFGLILYLFIVGLELDPRMVAINLRKSVAISVAGIAVPFGAGVAVSFALYDSLMPKD---TKVPFSSFFLFLGVAMSITAFPVLARILTETNLLTTRVG 399          
BLAST of EWM21712.1 vs. NCBI_GenBank
Match: gi|909126826|gb|KNE54137.1| (hypothetical protein AMAG_00137 [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 177.563 bits (449), Expect = 2.279e-46
Identity = 91/167 (54.49%), Postives = 121/167 (72.46%), Query Frame = 0
Query:   77 LSLFMVQAVIIITVTRLLSLGTKCLKQPRVIMEVVGGILLGPSALGHIPGYLDTVFPSQSLGYLALVANIGLVLYLFLVGVELDPEVLRRNGHKAVSIAVVGIAIPFGMGCLISPLLFNKLLVKEPGYEGAAYSSFLVFVGVAMSITAFPVLARILLESKLILSTAG 243
            L LF+VQ +I++ +TR+LS+  K  +QPRVI EV+GGILLGPSALG IPG+   +FP+ SLG   L+AN GLVLYLF+VG+ELDP ++  N  K+V+I+V GI +PFG G  +S  L+  L+   P      +SSF +F+GVAMSITAFPVLARIL E+ L+ +  G
Sbjct:   46 LPLFLVQVIIVVLMTRVLSMILKYFRQPRVIAEVIGGILLGPSALGQIPGFTKALFPASSLGMFGLIANFGLVLYLFIVGLELDPRMVAINLRKSVAISVAGIVVPFGAGVAVSFALYETLM---PADTKVPFSSFFLFLGVAMSITAFPVLARILTETNLLTTRVG 209          
BLAST of EWM21712.1 vs. NCBI_GenBank
Match: gi|751705718|gb|KIM54847.1| (hypothetical protein SCLCIDRAFT_1221671 [Scleroderma citrinum Foug A])

HSP 1 Score: 174.481 bits (441), Expect = 2.988e-45
Identity = 93/187 (49.73%), Postives = 131/187 (70.05%), Query Frame = 0
Query:   61 QPEGGIMSGHG----VLEDTLSLFMVQAVIIITVTRLLSLGTKCLKQPRVIMEVVGGILLGPSALGHIPGYLDTVFPSQSLGYLALVANIGLVLYLFLVGVELDPEVLRRNGHKAVSIAVVGIAIPFGMGCLISPLLFNKLLVKEPGYEGAAYSSFLVFVGVAMSITAFPVLARILLESKLILSTAG 243
            Q +GG+++G         D L L+++Q  III++++LLSLG + +KQPRVI EV+GGILLGP+A G IPG+   VFP+QS+ YL LVANIGL L+LF++G+E+D  V+RRN   +V +++ GI +PFG+G  IS  L+N+    +P      +  F++FVGV  SITAFPVL RIL E KL+ +T G
Sbjct:   21 QSQGGLLNGQDPTAFNTSDPLRLWIIQVGIIISMSQLLSLGLRRIKQPRVISEVLGGILLGPTAFGRIPGFTQHVFPTQSIPYLTLVANIGLCLFLFIIGLEIDASVIRRNARLSVFVSLAGIILPFGIGSAISIPLYNRF--ADPSVH---FPYFMLFVGVTYSITAFPVLCRILTELKLLDTTVG 202          
BLAST of EWM21712.1 vs. NCBI_GenBank
Match: gi|729705841|emb|CEI97583.1| (Putative K()/H() antiporter 1 [Rhizopus microsporus])

HSP 1 Score: 163.31 bits (412), Expect = 1.868e-44
Identity = 91/186 (48.92%), Postives = 129/186 (69.35%), Query Frame = 0
Query:   62 PEGGIMSGHG----VLEDTLSLFMVQAVIIITVTRLLSLGTKCLKQPRVIMEVVGGILLGPSALGHIPGYLDTVFPSQSLGYLALVANIGLVLYLFLVGVELDPEVLRRNGHKAVSIAVVGIAIPFGMGCLISPLLFNKLLVKEPGYEGAAYSSFLVFVGVAMSITAFPVLARILLESKLILSTAG 243
            P+ G+ +G         D + LF++QA II+   RL+S+    ++QPRVI EV+ GI+LGP+ +G IP + +TVFPS SL +L L+A +GLV +LF VG+E+D  V++R+ HK+VSIAVV +A+PFG+GC +S  L+   L  EP      + SFL+F+GVA+SITAFPVLARIL E KL+ +  G
Sbjct:    7 PQAGVFTGLNPASFNSSDPIVLFIIQATIILIFCRLISIPLGYIRQPRVISEVIAGIILGPTVMGRIPHFQETVFPSASLPFLNLIATLGLVFFLFQVGLEVDLRVIKRDWHKSVSIAVVSMALPFGLGCAVSVGLYK--LQNEPSIP---FGSFLLFLGVALSITAFPVLARILAELKLLRTKVG 187          
BLAST of EWM21712.1 vs. NCBI_GenBank
Match: gi|585104666|gb|EWM23549.1| (potassium:hydrogen antiporter [Nannochloropsis gaditana])

HSP 1 Score: 171.014 bits (432), Expect = 1.990e-44
Identity = 90/189 (47.62%), Postives = 128/189 (67.72%), Query Frame = 0
Query:   55 SSSIYFQPEGGIMSGHGVLEDTLSLFMVQAVIIITVTRLLSLGTKCLKQPRVIMEVVGGILLGPSALGHIPGYLDTVFPSQSLGYLALVANIGLVLYLFLVGVELDPEVLRRNGHKAVSIAVVGIAIPFGMGCLISPLLFNKLLVKEPGYEGAAYSSFLVFVGVAMSITAFPVLARILLESKLILSTAG 243
            S S + +  GG+++G   L  T++LF++Q VII+  TR+L+ G   LKQPRVI E++ GILLGPS +G+IPG+L  VFP +SL +L L AN+GL+LY+FLVG+EL P  L  N  ++V I+ VGI  PF +GC  S +L+          E   +SSFL+F G+++SITAFP+LARIL +  L+ +  G
Sbjct:   10 SPSDHSEVTGGVLAGANPLHSTVALFLLQVVIIMATTRILAYGLHYLKQPRVIAEILAGILLGPSGMGNIPGWLSNVFPDRSLPFLTLAANVGLILYMFLVGLELTPGALWTNARQSVLISTVGIVFPFLLGCGGSVVLYR----HRKNTEEVPFSSFLLFTGLSLSITAFPILARILTDLNLMETEVG 194          
BLAST of EWM21712.1 vs. NCBI_GenBank
Match: gi|1035373879|gb|OAX31539.1| (hypothetical protein K503DRAFT_76188, partial [Rhizopogon vinicolor AM-OR11-026])

HSP 1 Score: 167.162 bits (422), Expect = 7.903e-44
Identity = 89/185 (48.11%), Postives = 131/185 (70.81%), Query Frame = 0
Query:   63 EGGIMSGHG----VLEDTLSLFMVQAVIIITVTRLLSLGTKCLKQPRVIMEVVGGILLGPSALGHIPGYLDTVFPSQSLGYLALVANIGLVLYLFLVGVELDPEVLRRNGHKAVSIAVVGIAIPFGMGCLISPLLFNKLLVKEPGYEGAAYSSFLVFVGVAMSITAFPVLARILLESKLILSTAG 243
            EGG+++G       + D L L+++Q  +II + +LLSLG + LKQP+VI EV+GGILLGP+A G IPG+ + +FP  SL YL+LVANIGL L+LF+VG+E+D  +++RN   +V ++  G+A+PFG+G  +S  L+N  +  +P  +   ++ F++F GVA SITAFPVL RIL E KL+ +T G
Sbjct:   19 EGGLLTGIDPSAFDVSDPLRLWIIQVGVIIMMAQLLSLGLRRLKQPKVIAEVLGGILLGPTAFGRIPGFTNHIFPEDSLPYLSLVANIGLCLFLFIVGLEIDASIIKRNARMSVIVSFAGMALPFGLGSALSIPLYNHFI--DPSVQ---FTHFMLFTGVAYSITAFPVLCRILTELKLLDTTVG 198          
BLAST of EWM21712.1 vs. NCBI_GenBank
Match: gi|1026268903|gb|OAD02001.1| (hypothetical protein MUCCIDRAFT_39960, partial [Mucor circinelloides f. lusitanicus CBS 277.49])

HSP 1 Score: 167.162 bits (422), Expect = 1.031e-43
Identity = 90/186 (48.39%), Postives = 129/186 (69.35%), Query Frame = 0
Query:   62 PEGGIMSGHG----VLEDTLSLFMVQAVIIITVTRLLSLGTKCLKQPRVIMEVVGGILLGPSALGHIPGYLDTVFPSQSLGYLALVANIGLVLYLFLVGVELDPEVLRRNGHKAVSIAVVGIAIPFGMGCLISPLLFNKLLVKEPGYEGAAYSSFLVFVGVAMSITAFPVLARILLESKLILSTAG 243
            P+ G+ SG       L + ++LF++QAVII+   R+L++    LKQPRVI EV+ GI+LGPS +G IP + DT+FPSQSL +L L+A +GLV +LF VG+E+D  +++R+  ++VSIA  G+A+PFG+G  +S  L+     K        +SSFL+F+GVAM+ITAFPVLARIL E KL+ +  G
Sbjct:    7 PQAGVFSGLNPTAVNLANPITLFIIQAVIILVFCRILAVPLAYLKQPRVIAEVIAGIVLGPSVMGRIPHFKDTIFPSQSLPFLNLIATLGLVFFLFQVGLEVDLRIVKRDWKQSVSIAFAGMALPFGLGAAVSVGLY-----KLQNENNIPFSSFLLFLGVAMAITAFPVLARILAELKLLRTRVG 187          
BLAST of EWM21712.1 vs. NCBI_GenBank
Match: gi|511004274|gb|EPB85649.1| (hypothetical protein HMPREF1544_07556 [Mucor circinelloides f. circinelloides 1006PhL])

HSP 1 Score: 169.474 bits (428), Expect = 1.197e-43
Identity = 91/186 (48.92%), Postives = 130/186 (69.89%), Query Frame = 0
Query:   62 PEGGIMSGHG----VLEDTLSLFMVQAVIIITVTRLLSLGTKCLKQPRVIMEVVGGILLGPSALGHIPGYLDTVFPSQSLGYLALVANIGLVLYLFLVGVELDPEVLRRNGHKAVSIAVVGIAIPFGMGCLISPLLFNKLLVKEPGYEGAAYSSFLVFVGVAMSITAFPVLARILLESKLILSTAG 243
            P+ G+ SG       L + ++LF++QAVII+   R+L++    LKQPRVI EV+ GI+LGPS +G IP + DT+FPS+SL +L L+A +GLV +LF VG+E+D  +++R+  ++VSIAV G+A+PFG+G  +S  L+     K        +SSFL+F+GVAMSITAFPVLARIL E KL+ +  G
Sbjct:    7 PQAGVFSGLNPTAVNLANPITLFIIQAVIILVFCRILAVPLAYLKQPRVIAEVIAGIVLGPSVMGRIPHFKDTIFPSESLPFLNLIATLGLVFFLFQVGLEVDLRIVKRDWKQSVSIAVAGMALPFGLGAAVSIGLY-----KLQNENDIPFSSFLLFLGVAMSITAFPVLARILAELKLLRTRVG 187          
BLAST of EWM21712.1 vs. NCBI_GenBank
Match: gi|758348382|dbj|GAN09340.1| (conserved hypothetical protein [Mucor ambiguus])

HSP 1 Score: 169.088 bits (427), Expect = 1.459e-43
Identity = 91/193 (47.15%), Postives = 134/193 (69.43%), Query Frame = 0
Query:   55 SSSIYFQPEGGIMSGHGVLE----DTLSLFMVQAVIIITVTRLLSLGTKCLKQPRVIMEVVGGILLGPSALGHIPGYLDTVFPSQSLGYLALVANIGLVLYLFLVGVELDPEVLRRNGHKAVSIAVVGIAIPFGMGCLISPLLFNKLLVKEPGYEGAAYSSFLVFVGVAMSITAFPVLARILLESKLILSTAG 243
            SSS    P+ G+ +G    E    D + LF++Q  II+   R++++    L+QPRVI EV+ GI+LGP+ +G IPG++DT+FPS SL +L L+A +GLV +LF VG+E+D +V+R++ HK+++IAV G+A+PFG+G  +S  L+N       G +   + SFL+F+GVAMSITAFPVLARIL E KL+ +  G
Sbjct:    2 SSSEAATPQAGVFAGLNPAEYNPSDPIVLFIIQTTIILVFCRIIAIPLGYLRQPRVISEVIAGIILGPTVMGRIPGFMDTIFPSPSLPFLNLIATLGLVFFLFQVGLEVDLQVIRQDWHKSMAIAVAGMALPFGLGAAVSVGLYNL-----QGDDSINFGSFLLFLGVAMSITAFPVLARILAELKLLRTKVG 189          
The following BLAST results are available for this feature:
BLAST of EWM21712.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102029|gb|EWM21712.1|0.000e+0100.00k+ homeostasis protein kha1 [Nannochloropsis gadit... [more]
gi|909126825|gb|KNE54136.1|2.483e-4754.49hypothetical protein AMAG_17624 [Allomyces macrogy... [more]
gi|909126826|gb|KNE54137.1|2.279e-4654.49hypothetical protein AMAG_00137 [Allomyces macrogy... [more]
gi|751705718|gb|KIM54847.1|2.988e-4549.73hypothetical protein SCLCIDRAFT_1221671 [Scleroder... [more]
gi|729705841|emb|CEI97583.1|1.868e-4448.92Putative K()/H() antiporter 1 [Rhizopus microsporu... [more]
gi|585104666|gb|EWM23549.1|1.990e-4447.62potassium:hydrogen antiporter [Nannochloropsis gad... [more]
gi|1035373879|gb|OAX31539.1|7.903e-4448.11hypothetical protein K503DRAFT_76188, partial [Rhi... [more]
gi|1026268903|gb|OAD02001.1|1.031e-4348.39hypothetical protein MUCCIDRAFT_39960, partial [Mu... [more]
gi|511004274|gb|EPB85649.1|1.197e-4348.92hypothetical protein HMPREF1544_07556 [Mucor circi... [more]
gi|758348382|dbj|GAN09340.1|1.459e-4347.15conserved hypothetical protein [Mucor ambiguus][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8992rna8992Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications