EWM21725.1, cds8948 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21725.1 vs. NCBI_GenBank
Match: gi|585102048|gb|EWM21725.1| (hypothetical protein Naga_101008g2 [Nannochloropsis gaditana]) HSP 1 Score: 1123.23 bits (2904), Expect = 0.000e+0 Identity = 569/569 (100.00%), Postives = 569/569 (100.00%), Query Frame = 0
Query: 1 MTEDSVLQRRQLLNQALRARTTRRTGTLRGKERGREPAPKAGEEGVEGEEGEAADPGGLEVLLSQLTGPKITSDMQAFKAANPHAVLADFLRWQVPEAWVPGEGGVEGEAEGEAEEVAMEWGSLGHLDRAQVEAHWNLPLGRLVAFWREAPAIPAARQAPLFQEALAAEQVLHFLETLSPASLLCQALAAGFATVLCLLRHAPTPTVHGPATQAALDQLEGLIDEAISHLHDHQTTSEAMLFPPPSSSPSRPPSPPSRGPVSQACLTACERVCLAVARIENRLRCTTALWQVLPAQMRLIEGMVEGWEGGEGKGRGGERAPMPLRDDSERTAVLKLFNSAGGFVEGGALLEEEEEEEEEEGDKGGEEGEEGKKVEEGEEDGEGANGRERKKEGGMVVLRKEKGRNQEGRRGGREGEEEEEEELLHEYSDRQERRRSKLSSCSDLPIPARRIMAEKKDRDGGGGKKGADRQEEGGKQGEEGEEDALPPYVEAGMPSPPEVKTYVLRLTDMNPFYPRMAPGEGEGRGGGREGGRMREGLASSLAVTSRLFASMDRKEDSLRLALAHAESEV 569
MTEDSVLQRRQLLNQALRARTTRRTGTLRGKERGREPAPKAGEEGVEGEEGEAADPGGLEVLLSQLTGPKITSDMQAFKAANPHAVLADFLRWQVPEAWVPGEGGVEGEAEGEAEEVAMEWGSLGHLDRAQVEAHWNLPLGRLVAFWREAPAIPAARQAPLFQEALAAEQVLHFLETLSPASLLCQALAAGFATVLCLLRHAPTPTVHGPATQAALDQLEGLIDEAISHLHDHQTTSEAMLFPPPSSSPSRPPSPPSRGPVSQACLTACERVCLAVARIENRLRCTTALWQVLPAQMRLIEGMVEGWEGGEGKGRGGERAPMPLRDDSERTAVLKLFNSAGGFVEGGALLEEEEEEEEEEGDKGGEEGEEGKKVEEGEEDGEGANGRERKKEGGMVVLRKEKGRNQEGRRGGREGEEEEEEELLHEYSDRQERRRSKLSSCSDLPIPARRIMAEKKDRDGGGGKKGADRQEEGGKQGEEGEEDALPPYVEAGMPSPPEVKTYVLRLTDMNPFYPRMAPGEGEGRGGGREGGRMREGLASSLAVTSRLFASMDRKEDSLRLALAHAESEV
Sbjct: 1 MTEDSVLQRRQLLNQALRARTTRRTGTLRGKERGREPAPKAGEEGVEGEEGEAADPGGLEVLLSQLTGPKITSDMQAFKAANPHAVLADFLRWQVPEAWVPGEGGVEGEAEGEAEEVAMEWGSLGHLDRAQVEAHWNLPLGRLVAFWREAPAIPAARQAPLFQEALAAEQVLHFLETLSPASLLCQALAAGFATVLCLLRHAPTPTVHGPATQAALDQLEGLIDEAISHLHDHQTTSEAMLFPPPSSSPSRPPSPPSRGPVSQACLTACERVCLAVARIENRLRCTTALWQVLPAQMRLIEGMVEGWEGGEGKGRGGERAPMPLRDDSERTAVLKLFNSAGGFVEGGALLEEEEEEEEEEGDKGGEEGEEGKKVEEGEEDGEGANGRERKKEGGMVVLRKEKGRNQEGRRGGREGEEEEEEELLHEYSDRQERRRSKLSSCSDLPIPARRIMAEKKDRDGGGGKKGADRQEEGGKQGEEGEEDALPPYVEAGMPSPPEVKTYVLRLTDMNPFYPRMAPGEGEGRGGGREGGRMREGLASSLAVTSRLFASMDRKEDSLRLALAHAESEV 569
BLAST of EWM21725.1 vs. NCBI_GenBank
Match: gi|224007018|ref|XP_002292469.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220972111|gb|EED90444.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 112.849 bits (281), Expect = 3.447e-22 Identity = 98/284 (34.51%), Postives = 134/284 (47.18%), Query Frame = 0
Query: 61 VLLSQ-LTGPKITSDMQAFKAANPHAVLADFLRWQVPEAWVPGEGGVEGEAEGEAEEVAMEWGSLGHLDRAQV----EAHWNLP-LGRLVAFWR----EAPAIPAARQAPLFQEALAAEQVLHFLETLSPASLLCQALAAGFATVLCLLRHAPTPTVHGPATQAALDQLEGLIDEAISHLHDHQTTSEAMLFPPPSSSPSRPPSPPSRGPVSQACLTACERVCLAVARIENRLRCTTALWQVLPAQMRLIEGMVEGWEGGEGKGRGGERAPMPLRDDSERTAVL 334
+ +SQ L PK+ SDM +FKAAN AV DF+RW + + + E GE A ++ S + A+V EA + L L AFW EA PA Q PLF E V H ET+ PA L+ QALA A +L A P P+ + AL L ID AI L + +E LF P SS ++ S P VS + +T+CE C A+ +E L + AL Q P Q +L++ ++ + GE + L+D SER A L
Sbjct: 1896 IAISQRLQKPKLLSDMSSFKAANQGAVFEDFVRW-----YGNPQNPLSEEVNGETARRAAQYRSKLPPEEAKVLALEEASEAIAILMSLRAFWEDSWDEAEPCPAFEQEPLFDPYSTVEMVFHSFETIHPAILMEQALAVNLANARFVLEVATKPVKQVPSIKRALHHLLTSIDTAIERL--TKDAAEGCLFTSPRSSSNK--SEP-LVYVSTSTITSCEEACDAIGEMEILLSRSLALLQQFPGQYKLVDSFLQ--------CKHGEF--IFLKDPSERNAFL 2159
BLAST of EWM21725.1 vs. NCBI_GenBank
Match: gi|1210531825|dbj|GAX09576.1| (hypothetical protein FisN_19Lh072 [Fistulifera solaris]) HSP 1 Score: 97.0561 bits (240), Expect = 2.450e-17 Identity = 92/322 (28.57%), Postives = 139/322 (43.17%), Query Frame = 0
Query: 1 MTEDSVLQRRQLLNQALRARTTRRTGTLRGKERGREPAPKAGEEGVEGEEGEAADPGGLEVLLSQLTGPKITSDMQAFKAANPHAVLADFLRWQVPEAWVPGEGGVEGEAEGEAEEVAMEWGSLGHLD---------RAQVEAHWNLPLGRLVAFW----REAPAIPAARQAPLFQEALAAEQVLHFLETLSPASLLCQALAAGFATVLCLLRHAPTPTVHGPATQAALDQLEGLIDEAISHL-HD----HQTTSEAMLFPPPSSSPSRPPSPPSRGPVSQACLTACERVCLAVARIENRLRCTTALWQVLPAQMRLIEGMV 304
+T+D V QRR +++ R +T + + T++ + +EV +L PK+ SDMQAFKAANP A+ DF+ W G + EG ++ G+LD R++ A N L FW EA +IPA QAPLF + + E + +LET+ PASLLCQ +A A L + V +++L + + A+ HL HD +TT++ S VS L AC R CLA+ E ++ +L LP Q+RL+E ++
Sbjct: 843 LTDDVVAQRRLMMS---RQKTVKGSSTIKHR---------------------------IEVA-QRLQHPKLLSDMQAFKAANPGAIFEDFVNWY---------GNPDNPLEGFDQKDFFT----GNLDSASATSPSMRSEKAAEANRVLDDTRKFWARTWDEAKSIPAVDQAPLFDASTSVEMAIDYLETIHPASLLCQVMAVNLAMSYFTLVVSAGEAVTVSVVRSSLVRFREHVVSALGHLAHDATYGDRTTAD---------------STNMMSVVSIESLAACGRACLALGEAEVQVARARSLLNKLPHQVRLVESIM 1105
BLAST of EWM21725.1 vs. NCBI_GenBank
Match: gi|219125909|ref|XP_002183212.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405487|gb|EEC45430.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 95.1301 bits (235), Expect = 1.177e-16 Identity = 79/262 (30.15%), Postives = 117/262 (44.66%), Query Frame = 0
Query: 66 LTGPKITSDMQAFKAANPHAVLADFLRWQVPEAWVPGEGGVEGEAEGEAEEVAMEWGSL----GHLDRAQVEAHWNLPLGR--LVAFWREAPAIPAARQAPLFQEALAAEQVLHFLETLSPASLLCQALAAGFATVLCLLRHAPTPTVHGPATQAALDQLEGLIDEAISHLHDHQTTSEAMLFPPPSSSPSRPPSPPSRGPVSQACLTACERVCLAVARIENRLRCTTALWQVLPAQMRLIEGMVEGWEG--GEGKGRGGER 319
L PK+ SDMQAFKAANP+A+ DF+ W G E E+ +A+ G+ LD+A+ E + L + R W+EA + A+ Q PLF + E +L FLETL PA+LLCQ +A L + + + AAL+ L G +++A + T P S VS L+ACE C+A+ E + +L P Q + +E +++ EG + G G R
Sbjct: 980 LQKPKLLSDMQAFKAANPNAIFQDFVNWY-------GNPRDPLEEYEESLSLALRPGTSDTIETKLDKAK-EGIYVLSMTRDFWTGTWKEAKPLSASFQEPLFDATMTVEMMLDFLETLHPATLLCQIMAVNLTAAYFTLSISAGEATNIESVMAALEYLRGKVEQACQLISVDTTAGSG-----PREKGEDESKDVSCRIVSVESLSACENACVAIGEAEFIISKAKSLLHKFPGQYQFVECILKNPEGCVADLCGENGRR 1228
BLAST of EWM21725.1 vs. NCBI_GenBank
Match: gi|1210521507|dbj|GAX19497.1| (hypothetical protein FisN_19Hh072 [Fistulifera solaris]) HSP 1 Score: 93.9745 bits (232), Expect = 2.552e-16 Identity = 84/252 (33.33%), Postives = 119/252 (47.22%), Query Frame = 0
Query: 65 QLTGPKITSDMQAFKAANPHAVLADFLRWQ-VPEAWVPGEGG-----VEGEAEGEAEEVAMEWGSLGHLDRAQVEAHWNLPLGRLVA-FWREAPAIPAARQAPLFQEALAAEQVLHFLETLSPASLLCQALAAGFATVLCLLRHAPTPTVHGPATQAALDQLEGLIDEAISHL-HD----HQTTSEAMLFPPPSSSPSRPPSPPSRGPVSQACLTACERVCLAVARIENRLRCTTALWQVLPAQMRLIEGMV 304
+L PK+ SDMQAFKAANP AV DF+ W P+ P EG G+ +GE+ AM G + D+A + + A W EA IPA QAPLF + + E + +LET+ PASLLCQ +A A L + V +++L + + A+ HL HD +TT++ S VS L AC R CLA+ E ++ +L LP Q+RL+E ++
Sbjct: 869 RLQHPKLLSDMQAFKAANPGAVFEDFVNWYGNPDN--PLEGFDQKDFFTGKLDGES---AMSPG--MNSDKAAEAIRVIDDIRKFWARTWDEAKPIPAVDQAPLFDASTSVEMAIDYLETIHPASLLCQVMAVNLAMSYFTLVVSAGEAVTVSVVRSSLVRFREHVVSALGHLAHDATFGDRTTAD---------------STNLMSVVSIESLAACGRACLALGEAEVQVARARSLLNKLPHQVRLVESIM 1098
BLAST of EWM21725.1 vs. NCBI_GenBank
Match: gi|675177489|ref|XP_008897629.1| (hypothetical protein PPTG_05671 [Phytophthora parasitica INRA-310] >gi|568101787|gb|ETN16469.1| hypothetical protein PPTG_05671 [Phytophthora parasitica INRA-310]) HSP 1 Score: 90.8929 bits (224), Expect = 2.441e-15 Identity = 73/250 (29.20%), Postives = 108/250 (43.20%), Query Frame = 0
Query: 62 LLSQLTGPKITSDMQAFKAANPHAVLADFLRWQVPEAWVPGEGGVEGEAEGEAEEVAMEWGSLGH---LDRAQV----EAHWNLPLGRLVAFWREAPAIPAARQAPLFQEALAAEQVLHFLETLSPASLLCQALAAGFATVLCLLRHAPTPTVHG---PATQAALDQLEGLIDEAISHLHDHQTTSEAMLFPPPSSSPSRPPSPPSRGPVSQ------ACLTACERVCLAVARIENRLRCTTALWQVLPA 295
L Q+ + SDMQAFKAANP L DF+RW P+ W+P + ++ E A+E W H +R + E W W + +PA+RQ LF +E+V H++ETLSP L Q LA ++ + L A V P AL L L + AI+ + D S+ + FP + R S + V Q L AC ++ ++ +E + AL+ P
Sbjct: 775 LRQQIQSTTLISDMQAFKAANPRCCLTDFIRWYSPKDWIPFKTPIDPEQTDLAQEGRGVWWFEKHGMLSERMRFGPRHEHIWQ-------QMWETSAPMPASRQKRLFDPVQESEKVYHYMETLSPHELFHQMLAGAISSSVFALETALPVRVSSDVLPVVHQALQNLHSLANRAIALMDDALAESQ-VAFPAAGNKQQREQSTAAAHQVQQLQVAFEMALDACWKLVQSLESVEAMVTKALALFHYFPV 1016
BLAST of EWM21725.1 vs. NCBI_GenBank
Match: gi|567976192|gb|ETL26720.1| (hypothetical protein L916_19652 [Phytophthora parasitica]) HSP 1 Score: 90.8929 bits (224), Expect = 2.688e-15 Identity = 73/250 (29.20%), Postives = 108/250 (43.20%), Query Frame = 0
Query: 62 LLSQLTGPKITSDMQAFKAANPHAVLADFLRWQVPEAWVPGEGGVEGEAEGEAEEVAMEWGSLGH---LDRAQV----EAHWNLPLGRLVAFWREAPAIPAARQAPLFQEALAAEQVLHFLETLSPASLLCQALAAGFATVLCLLRHAPTPTVHG---PATQAALDQLEGLIDEAISHLHDHQTTSEAMLFPPPSSSPSRPPSPPSRGPVSQ------ACLTACERVCLAVARIENRLRCTTALWQVLPA 295
L Q+ + SDMQAFKAANP L DF+RW P+ W+P + ++ E A+E W H +R + E W W + +PA+RQ LF +E+V H++ETLSP L Q LA ++ + L A V P AL L L + AI+ + D S+ + FP + R S + V Q L AC ++ ++ +E + AL+ P
Sbjct: 776 LRQQIQSTTLISDMQAFKAANPRCCLTDFIRWYSPKDWIPFKTPIDPERTDLAQEGRGVWWFEKHGMLSERMRFGPRHEHIWQ-------QMWETSAPMPASRQKRLFDPVQESEKVYHYMETLSPHELFHQMLAGAISSSVFALETALPVRVSSDVLPVIHQALQNLHSLANRAIALMDDALAESQ-VAFPAAGNKQQREQSTAAAHQVQQLQVAFEMALDACWKLVQSLESVEAMVTKALALFHYFPV 1017
BLAST of EWM21725.1 vs. NCBI_GenBank
Match: gi|570937517|gb|ETP02774.1| (hypothetical protein F441_20203 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 90.5077 bits (223), Expect = 3.200e-15 Identity = 73/250 (29.20%), Postives = 108/250 (43.20%), Query Frame = 0
Query: 62 LLSQLTGPKITSDMQAFKAANPHAVLADFLRWQVPEAWVPGEGGVEGEAEGEAEEVAMEWGSLGH---LDRAQV----EAHWNLPLGRLVAFWREAPAIPAARQAPLFQEALAAEQVLHFLETLSPASLLCQALAAGFATVLCLLRHAPTPTVHG---PATQAALDQLEGLIDEAISHLHDHQTTSEAMLFPPPSSSPSRPPSPPSRGPVSQ------ACLTACERVCLAVARIENRLRCTTALWQVLPA 295
L Q+ + SDMQAFKAANP L DF+RW P+ W+P + ++ E A+E W H +R + E W W + +PA+RQ LF +E+V H++ETLSP L Q LA ++ + L A V P AL L L + AI+ + D S+ + FP + R S + V Q L AC ++ ++ +E + AL+ P
Sbjct: 776 LRQQIQSTTLISDMQAFKAANPRCCLTDFIRWYSPKDWIPFKTPIDPERTDLAQEGRGVWWFEKHGMLSERMRFGPRHEHIWQ-------QMWETSAPMPASRQKRLFDPVQESEKVYHYMETLSPHELFHQMLAGAISSSVFALETALPVRVSSDVLPVVHQALQNLHSLANRAIALMDDALAESQ-VAFPAAGNKQQREQSTAAAHQVQQLQVAFEMALDACWKLVQSLESVEAMVTKALALFHYFPV 1017
BLAST of EWM21725.1 vs. NCBI_GenBank
Match: gi|570313730|gb|ETO61678.1| (hypothetical protein F444_20331 [Phytophthora parasitica P1976]) HSP 1 Score: 90.5077 bits (223), Expect = 3.401e-15 Identity = 73/250 (29.20%), Postives = 108/250 (43.20%), Query Frame = 0
Query: 62 LLSQLTGPKITSDMQAFKAANPHAVLADFLRWQVPEAWVPGEGGVEGEAEGEAEEVAMEWGSLGH---LDRAQV----EAHWNLPLGRLVAFWREAPAIPAARQAPLFQEALAAEQVLHFLETLSPASLLCQALAAGFATVLCLLRHAPTPTVHG---PATQAALDQLEGLIDEAISHLHDHQTTSEAMLFPPPSSSPSRPPSPPSRGPVSQ------ACLTACERVCLAVARIENRLRCTTALWQVLPA 295
L Q+ + SDMQAFKAANP L DF+RW P+ W+P + ++ E A+E W H +R + E W W + +PA+RQ LF +E+V H++ETLSP L Q LA ++ + L A V P AL L L + AI+ + D S+ + FP + R S + V Q L AC ++ ++ +E + AL+ P
Sbjct: 776 LRQQIQSTTLISDMQAFKAANPRCCLTDFIRWYSPKDWIPFKTPIDPERTDLAQEGRGVWWFEKHGMLSERMRFGPRHEHIWQ-------QMWETSAPMPASRQKRLFDPVQESEKVYHYMETLSPHELFHQMLAGAISSSVFALETALPVRVSSDVLPVIHQALQNLHSLANRAIALMDDALAESQ-VAFPAAGNKQQREQSTAAAHQVQQLQVAFEMALDACWKLVQSLESVEAMVTKALALFHYFPV 1017
BLAST of EWM21725.1 vs. NCBI_GenBank
Match: gi|566010028|gb|ETI32939.1| (hypothetical protein F443_20332 [Phytophthora parasitica P1569]) HSP 1 Score: 90.5077 bits (223), Expect = 3.401e-15 Identity = 73/250 (29.20%), Postives = 108/250 (43.20%), Query Frame = 0
Query: 62 LLSQLTGPKITSDMQAFKAANPHAVLADFLRWQVPEAWVPGEGGVEGEAEGEAEEVAMEWGSLGH---LDRAQV----EAHWNLPLGRLVAFWREAPAIPAARQAPLFQEALAAEQVLHFLETLSPASLLCQALAAGFATVLCLLRHAPTPTVHG---PATQAALDQLEGLIDEAISHLHDHQTTSEAMLFPPPSSSPSRPPSPPSRGPVSQ------ACLTACERVCLAVARIENRLRCTTALWQVLPA 295
L Q+ + SDMQAFKAANP L DF+RW P+ W+P + ++ E A+E W H +R + E W W + +PA+RQ LF +E+V H++ETLSP L Q LA ++ + L A V P AL L L + AI+ + D S+ + FP + R S + V Q L AC ++ ++ +E + AL+ P
Sbjct: 776 LRQQIQSTTLISDMQAFKAANPRCCLTDFIRWYSPKDWIPFKTPIDPERTDLAQEGRGVWWFEKHGMLSERMRFGPRHEHIWQ-------QMWETSAPMPASRQKRLFDPVQESEKVYHYMETLSPHELFHQMLAGAISSSVFALETALPVRVSSDVLPVVHQALQNLHSLANRAIALMDDALAESQ-VAFPAAGNKQQREQSTAAAHQVQQLQVAFEMALDACWKLVQSLESVEAMVTKALALFHYFPV 1017 The following BLAST results are available for this feature:
BLAST of EWM21725.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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