EWM21729.1, cds8945 (CDS) Nannochloropsis gaditana

Overview
NameEWM21729.1
Unique Namecds8945
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:615953..615965 +
Alignment locationKK037250.1:616334..616422 +
Alignment locationKK037250.1:616585..616908 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21729.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100505g1.3089.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:615953..615965 +
KK037250.1supercontigKK037250.1:616334..616422 +
KK037250.1supercontigKK037250.1:616585..616908 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21729.1 vs. NCBI_GenBank
Match: gi|585102054|gb|EWM21729.1| (hypothetical protein Naga_100505g1 [Nannochloropsis gaditana])

HSP 1 Score: 276.174 bits (705), Expect = 7.355e-94
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0 
Query:    1 MCGSGTDRGKKVIQAAQALSHTMADSWDEENKDKETTRSAPQKSWADDDDDFTPVRPTVQKEVTYPAPQRTAVGPSRDGGFGGATAASRDFSDGRGARGEGDFSNFGSRRGSGRGGGREGGYRGSWGPARGPGGRRGAPAG 141
            MCGSGTDRGKKVIQAAQALSHTMADSWDEENKDKETTRSAPQKSWADDDDDFTPVRPTVQKEVTYPAPQRTAVGPSRDGGFGGATAASRDFSDGRGARGEGDFSNFGSRRGSGRGGGREGGYRGSWGPARGPGGRRGAPAG
Sbjct:    1 MCGSGTDRGKKVIQAAQALSHTMADSWDEENKDKETTRSAPQKSWADDDDDFTPVRPTVQKEVTYPAPQRTAVGPSRDGGFGGATAASRDFSDGRGARGEGDFSNFGSRRGSGRGGGREGGYRGSWGPARGPGGRRGAPAG 141
The following BLAST results are available for this feature:
BLAST of EWM21729.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102054|gb|EWM21729.1|7.355e-94100.00hypothetical protein Naga_100505g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8975rna8975Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications