EWM21731.1, cds8944 (CDS) Nannochloropsis gaditana

Overview
NameEWM21731.1
Unique Namecds8944
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:614783..615609 -
Alignment locationKK037250.1:614233..614470 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21731.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100505g2.3091.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:614783..615609 -
KK037250.1supercontigKK037250.1:614233..614470 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM21731.1 vs. NCBI_GenBank
Match: gi|585102056|gb|EWM21731.1| (hypothetical protein Naga_100505g2 [Nannochloropsis gaditana])

HSP 1 Score: 733.406 bits (1892), Expect = 0.000e+0
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0 
Query:    1 MGQHVYTATAVPANPIQTCLLTAKSRTQRSSASILSFSSYLAALLLLVLVIVLPSNPTNAAHAPPSAPVATARTRPSFFSRGRTSSVQEAPLSTNQPKAFSNVQDDDRWDTGRFLRAVVDAQVAQVSEEVNRVRAFITLPPGIVNTSRNPEEVAEQVGKLVVDVGMGYLQSAALGYAFGYGGAVMADDMTKRLGARFCGKTFAHKRGIKQAKQFGEFCAAFTAFEGILHVGRGISDKWNGILGSTAVGMYTTRNRALSAQLKNGLTFGGFNYVLSGKATCIVLSGPWLPASFWSAWMLCVGGCCTEDVMAFAHMIHDPKAMSRVDSRPKRSSHLAGGRNLRTNGSMGTVTKNRD 354
            MGQHVYTATAVPANPIQTCLLTAKSRTQRSSASILSFSSYLAALLLLVLVIVLPSNPTNAAHAPPSAPVATARTRPSFFSRGRTSSVQEAPLSTNQPKAFSNVQDDDRWDTGRFLRAVVDAQVAQVSEEVNRVRAFITLPPGIVNTSRNPEEVAEQVGKLVVDVGMGYLQSAALGYAFGYGGAVMADDMTKRLGARFCGKTFAHKRGIKQAKQFGEFCAAFTAFEGILHVGRGISDKWNGILGSTAVGMYTTRNRALSAQLKNGLTFGGFNYVLSGKATCIVLSGPWLPASFWSAWMLCVGGCCTEDVMAFAHMIHDPKAMSRVDSRPKRSSHLAGGRNLRTNGSMGTVTKNRD
Sbjct:    1 MGQHVYTATAVPANPIQTCLLTAKSRTQRSSASILSFSSYLAALLLLVLVIVLPSNPTNAAHAPPSAPVATARTRPSFFSRGRTSSVQEAPLSTNQPKAFSNVQDDDRWDTGRFLRAVVDAQVAQVSEEVNRVRAFITLPPGIVNTSRNPEEVAEQVGKLVVDVGMGYLQSAALGYAFGYGGAVMADDMTKRLGARFCGKTFAHKRGIKQAKQFGEFCAAFTAFEGILHVGRGISDKWNGILGSTAVGMYTTRNRALSAQLKNGLTFGGFNYVLSGKATCIVLSGPWLPASFWSAWMLCVGGCCTEDVMAFAHMIHDPKAMSRVDSRPKRSSHLAGGRNLRTNGSMGTVTKNRD 354
The following BLAST results are available for this feature:
BLAST of EWM21731.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102056|gb|EWM21731.1|0.000e+0100.00hypothetical protein Naga_100505g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8974rna8974Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications