EWM21728.1, cds8942 (CDS) Nannochloropsis gaditana

Overview
NameEWM21728.1
Unique Namecds8942
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:609344..609367 +
Alignment locationKK037250.1:609421..610110 +

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Properties
Property NameValue
Protein idEWM21728.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100505g4.3088.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:609344..609367 +
KK037250.1supercontigKK037250.1:609421..610110 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21728.1 vs. NCBI_GenBank
Match: gi|585102053|gb|EWM21728.1| (hypothetical protein Naga_100505g4 [Nannochloropsis gaditana])

HSP 1 Score: 471.47 bits (1212), Expect = 6.934e-168
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0 
Query:    1 MEGGQGICATPEGYCHKAKRFSFLAKFPPQFEIVGHLGSLNEKECTWEKKTRSTSALPRMPALRQAYALFKTAHRSSSRINTLHSKIGFCRRTLSSAAHVLLVGRLCLFSSSLACRASVPSLGIAFPRLPRPSPFLSPGASLQSVFYSKLCPSSPPCPLSSKQLRPSAQRSRGSSALPPSMTSLPASLTRKSGGTVLPQRGVTMTSDSTGEAGKQGLSPPKRPGQRLSGAYFCPGND 237
            MEGGQGICATPEGYCHKAKRFSFLAKFPPQFEIVGHLGSLNEKECTWEKKTRSTSALPRMPALRQAYALFKTAHRSSSRINTLHSKIGFCRRTLSSAAHVLLVGRLCLFSSSLACRASVPSLGIAFPRLPRPSPFLSPGASLQSVFYSKLCPSSPPCPLSSKQLRPSAQRSRGSSALPPSMTSLPASLTRKSGGTVLPQRGVTMTSDSTGEAGKQGLSPPKRPGQRLSGAYFCPGND
Sbjct:    1 MEGGQGICATPEGYCHKAKRFSFLAKFPPQFEIVGHLGSLNEKECTWEKKTRSTSALPRMPALRQAYALFKTAHRSSSRINTLHSKIGFCRRTLSSAAHVLLVGRLCLFSSSLACRASVPSLGIAFPRLPRPSPFLSPGASLQSVFYSKLCPSSPPCPLSSKQLRPSAQRSRGSSALPPSMTSLPASLTRKSGGTVLPQRGVTMTSDSTGEAGKQGLSPPKRPGQRLSGAYFCPGND 237
[Close]
BLAST of EWM21728.1 vs. NCBI_GenBank
Match: gi|553190285|ref|XP_005855161.1| (hypothetical protein NGA_0147700 [Nannochloropsis gaditana CCMP526] >gi|422293902|gb|EKU21202.1| hypothetical protein NGA_0147700 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 261.536 bits (667), Expect = 1.199e-84
Identity = 134/136 (98.53%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:   60 MPALRQAYALFKTAHRSSSRINTLHSKIGFCRRTLSSAAHVLLVGRLCLFSSSLACRASVPSLGIAFPRLPRPSPFLSPGASLQSVFYSKLCPSSPPCPLSSKQLRPSAQRSRGSSALPPSMTSLPASLTRKSGGT 195
            MPALRQAYALFKTAHRSSSRINTLHSKIGFCRRTLSSAAHVLLVGRLCLFSSSLACRASVPSLGIAFPRLPRPSPFLSPGASLQSVFYSKLCPSSPPCPLSSKQLRPSAQRSRGSSALPPSMTSLPASLTRKSG +
Sbjct:    1 MPALRQAYALFKTAHRSSSRINTLHSKIGFCRRTLSSAAHVLLVGRLCLFSSSLACRASVPSLGIAFPRLPRPSPFLSPGASLQSVFYSKLCPSSPPCPLSSKQLRPSAQRSRGSSALPPSMTSLPASLTRKSGAS 136
The following BLAST results are available for this feature:
BLAST of EWM21728.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585102053|gb|EWM21728.1|6.934e-168100.00hypothetical protein Naga_100505g4 [Nannochloropsi... [more]
gi|553190285|ref|XP_005855161.1|1.199e-8498.53hypothetical protein NGA_0147700 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8972rna8972Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications