EWM21745.1, cds8928 (CDS) Nannochloropsis gaditana

Overview
NameEWM21745.1
Unique Namecds8928
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:577817..577972 -
Alignment locationKK037250.1:577415..577555 -
Alignment locationKK037250.1:577197..577259 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21745.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100303g7.774.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:577817..577972 -
KK037250.1supercontigKK037250.1:577415..577555 -
KK037250.1supercontigKK037250.1:577197..577259 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21745.1 vs. NCBI_GenBank
Match: gi|585102076|gb|EWM21745.1| (hypothetical protein Naga_100303g7 [Nannochloropsis gaditana])

HSP 1 Score: 244.588 bits (623), Expect = 5.003e-82
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 
Query:    1 MGKAYQSLSASWQFLAALVLFLLAHGNCDARAPAQDLGGETDALNLVNHLALRRRLVTASEVLSEGQGYNPNLDNQSYYEPLPPSSQEQYQQRAQHRSSTEAHSDDENAINLRSGGVRM 119
            MGKAYQSLSASWQFLAALVLFLLAHGNCDARAPAQDLGGETDALNLVNHLALRRRLVTASEVLSEGQGYNPNLDNQSYYEPLPPSSQEQYQQRAQHRSSTEAHSDDENAINLRSGGVRM
Sbjct:    1 MGKAYQSLSASWQFLAALVLFLLAHGNCDARAPAQDLGGETDALNLVNHLALRRRLVTASEVLSEGQGYNPNLDNQSYYEPLPPSSQEQYQQRAQHRSSTEAHSDDENAINLRSGGVRM 119
[Close]
BLAST of EWM21745.1 vs. NCBI_GenBank
Match: gi|553191107|ref|XP_005855322.1| (hypothetical protein NGA_0085700 [Nannochloropsis gaditana CCMP526] >gi|422293741|gb|EKU21041.1| hypothetical protein NGA_0085700 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 236.884 bits (603), Expect = 4.829e-79
Identity = 116/119 (97.48%), Postives = 116/119 (97.48%), Query Frame = 0 
Query:    1 MGKAYQSLSASWQFLAALVLFLLAHGNCDARAPAQDLGGETDALNLVNHLALRRRLVTASEVLSEGQGYNPNLDNQSYYEPLPPSSQEQYQQRAQHRSSTEAHSDDENAINLRSGGVRM 119
            MGKAYQSLSASWQFLAALVLFLLAHGNCDA  PAQDLGGETDALNLVNH ALRRRLVTASEVLSEGQGYNPNLDNQSYYEPLPPSSQEQYQQRAQHRSSTEAHSDDENAINLRSGGVRM
Sbjct:    1 MGKAYQSLSASWQFLAALVLFLLAHGNCDAPPPAQDLGGETDALNLVNHRALRRRLVTASEVLSEGQGYNPNLDNQSYYEPLPPSSQEQYQQRAQHRSSTEAHSDDENAINLRSGGVRM 119
The following BLAST results are available for this feature:
BLAST of EWM21745.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585102076|gb|EWM21745.1|5.003e-82100.00hypothetical protein Naga_100303g7 [Nannochloropsi... [more]
gi|553191107|ref|XP_005855322.1|4.829e-7997.48hypothetical protein NGA_0085700 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8958rna8958Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications