EWM29764.1, cds892 (CDS) Nannochloropsis gaditana

Overview
NameEWM29764.1
Unique Namecds892
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:662694..662711 -
Alignment locationCM002456.1:662506..662559 -
Alignment locationCM002456.1:662289..662451 -
Alignment locationCM002456.1:662110..662201 -

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Properties
Property NameValue
Protein idEWM29764.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100022g1.863.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:662694..662711 -
CM002456.1supercontigCM002456.1:662506..662559 -
CM002456.1supercontigCM002456.1:662289..662451 -
CM002456.1supercontigCM002456.1:662110..662201 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM29764.1 vs. NCBI_GenBank
Match: gi|585112344|gb|EWM29764.1| (hypothetical protein Naga_100022g1 [Nannochloropsis gaditana])

HSP 1 Score: 222.246 bits (565), Expect = 1.548e-73
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
Query:    1 MMTPIHNEDSAWKHDLRRPRDTLRPLDISCIHLQTTREHQGLRETWNSVNPSTAHSIFSLSSPVERLLRSVKITWPFPHPCGDGCICALLPQELCIEGTRPGSPDTSV 108
            MMTPIHNEDSAWKHDLRRPRDTLRPLDISCIHLQTTREHQGLRETWNSVNPSTAHSIFSLSSPVERLLRSVKITWPFPHPCGDGCICALLPQELCIEGTRPGSPDTSV
Sbjct:    1 MMTPIHNEDSAWKHDLRRPRDTLRPLDISCIHLQTTREHQGLRETWNSVNPSTAHSIFSLSSPVERLLRSVKITWPFPHPCGDGCICALLPQELCIEGTRPGSPDTSV 108          
BLAST of EWM29764.1 vs. NCBI_GenBank
Match: gi|585099265|gb|EWM20029.1| (hypothetical protein Naga_102214g1 [Nannochloropsis gaditana])

HSP 1 Score: 110.923 bits (276), Expect = 6.784e-30
Identity = 53/54 (98.15%), Postives = 53/54 (98.15%), Query Frame = 0
Query:   25 PLDISCIHLQTTREHQGLRETWNSVNPSTAHSIFSLSSPVERLLRSVKITWPFP 78
            PLDISCIHLQTTREHQGLRE WNSVNPSTAHSIFSLSSPVERLLRSVKITWPFP
Sbjct:   17 PLDISCIHLQTTREHQGLREAWNSVNPSTAHSIFSLSSPVERLLRSVKITWPFP 70          
The following BLAST results are available for this feature:
BLAST of EWM29764.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585112344|gb|EWM29764.1|1.548e-73100.00hypothetical protein Naga_100022g1 [Nannochloropsi... [more]
gi|585099265|gb|EWM20029.1|6.784e-3098.15hypothetical protein Naga_102214g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna892rna892Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications