EWM21760.1, cds8913 (CDS) Nannochloropsis gaditana

Overview
NameEWM21760.1
Unique Namecds8913
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:534893..535125 -
Alignment locationKK037250.1:533817..534660 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21760.1
ProductTB2/DP1/HVA22-related protein
Orig transcript idgnl|cribi|Naga_100815g2.2468.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:534893..535125 -
KK037250.1supercontigKK037250.1:533817..534660 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0016043cellular component organization
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005777peroxisome
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR004345TB2_DP1_HVA22
Homology
BLAST of EWM21760.1 vs. NCBI_GenBank
Match: gi|585102093|gb|EWM21760.1| (TB2/DP1/HVA22-related protein [Nannochloropsis gaditana])

HSP 1 Score: 716.072 bits (1847), Expect = 0.000e+0
Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 0
Query:    1 MSSGGAQGQTPMQRLTIMKDNVLKKVERQMEQYPSLTMRSSLLDMEKKVNVPAPALFILGSSSLVLLLVLLVSMEGVALLVGLAYPLLGALKAIKVQEAHVIKFFIQYFLLFNALNLLETFLPLSRLPLYYLGKLLFLAWAFNPKTQGARLVYGTLRPLLLPHLGIALGASGAEQSRPGGGGRKRGGGRENTGEGRFGARDGSGEGASIHLRIELAARGLEKPAEPERLDTLCQLRILPMTGGHSEVRRAALDEGQWYKSRINTAPPQDAPDWRHDPQFLRVPTTEDNVLEVLIVNKMSWRDHPLGRVRLPLRGLSFPIETTLPLEDPFGDEREEGGEENERGEVQGELEIHLARVEE 358
            MSSGGAQGQTPMQRLTIMKDNVLKKVERQMEQYPSLTMRSSLLDMEKKVNVPAPALFILGSSSLVLLLVLLVSMEGVALLVGLAYPLLGALKAIKVQEAHVIKFFIQYFLLFNALNLLETFLPLSRLPLYYLGKLLFLAWAFNPKTQGARLVYGTLRPLLLPHLGIALGASGAEQSRPGGGGRKRGGGRENTGEGRFGARDGSGEGASIHLRIELAARGLEKPAEPERLDTLCQLRILPMTGGHSEVRRAALDEGQWYKSRINTAPPQDAPDWRHDPQFLRVPTTEDNVLEVLIVNKMSWRDHPLGRVRLPLRGLSFPIETTLPLEDPFGDEREEGGEENERGEVQGELEIHLARVEE
Sbjct:    1 MSSGGAQGQTPMQRLTIMKDNVLKKVERQMEQYPSLTMRSSLLDMEKKVNVPAPALFILGSSSLVLLLVLLVSMEGVALLVGLAYPLLGALKAIKVQEAHVIKFFIQYFLLFNALNLLETFLPLSRLPLYYLGKLLFLAWAFNPKTQGARLVYGTLRPLLLPHLGIALGASGAEQSRPGGGGRKRGGGRENTGEGRFGARDGSGEGASIHLRIELAARGLEKPAEPERLDTLCQLRILPMTGGHSEVRRAALDEGQWYKSRINTAPPQDAPDWRHDPQFLRVPTTEDNVLEVLIVNKMSWRDHPLGRVRLPLRGLSFPIETTLPLEDPFGDEREEGGEENERGEVQGELEIHLARVEE 358          
BLAST of EWM21760.1 vs. NCBI_GenBank
Match: gi|553188010|ref|XP_005854717.1| (peroxin-1, partial [Nannochloropsis gaditana CCMP526] >gi|422294344|gb|EKU21644.1| peroxin-1, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 655.596 bits (1690), Expect = 0.000e+0
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0
Query:    1 MSSGGAQGQTPMQRLTIMKDNVLKKVERQMEQYPSLTMRSSLLDMEKKVNVPAPALFILGSSSLVLLLVLLVSMEGVALLVGLAYPLLGALKAIKVQEAHVIKFFIQYFLLFNALNLLETFLPLSRLPLYYLGKLLFLAWAFNPKTQGARLVYGTLRPLLLPHLGIALGASGAEQSRPGGGGRKRGGGRENTGEGRFGARDGSGEGASIHLRIELAARGLEKPAEPERLDTLCQLRILPMTGGHSEVRRAALDEGQWYKSRINTAPPQDAPDWRHDPQFLRVPTTEDNVLEVLIVNKMSWRDHPLGRVRLPLRGLSFPIETTLPL 325
            MSSGGAQGQTPMQRLTIMKDNVLKKVERQMEQYPSLTMRSSLLDMEKKVNVPAPALFILGSSSLVLLLVLLVSMEGVALLVGLAYPLLGALKAIKVQEAHVIKFFIQYFLLFNALNLLETFLPLSRLPLYYLGKLLFLAWAFNPKTQGARLVYGTLRPLLLPHLGIALGASGAEQSRPGGGGRKRGGGRENTGEGRFGARDGSGEGASIHLRIELAARGLEKPAEPERLDTLCQLRILPMTGGHSEVRRAALDEGQWYKSRINTAPPQDAPDWRHDPQFLRVPTTEDNVLEVLIVNKMSWRDHPLGRVRLPLRGLSFPIETTLPL
Sbjct: 1336 MSSGGAQGQTPMQRLTIMKDNVLKKVERQMEQYPSLTMRSSLLDMEKKVNVPAPALFILGSSSLVLLLVLLVSMEGVALLVGLAYPLLGALKAIKVQEAHVIKFFIQYFLLFNALNLLETFLPLSRLPLYYLGKLLFLAWAFNPKTQGARLVYGTLRPLLLPHLGIALGASGAEQSRPGGGGRKRGGGRENTGEGRFGARDGSGEGASIHLRIELAARGLEKPAEPERLDTLCQLRILPMTGGHSEVRRAALDEGQWYKSRINTAPPQDAPDWRHDPQFLRVPTTEDNVLEVLIVNKMSWRDHPLGRVRLPLRGLSFPIETTLPL 1660          
BLAST of EWM21760.1 vs. NCBI_GenBank
Match: gi|301100994|ref|XP_002899586.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262103894|gb|EEY61946.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 75.0998 bits (183), Expect = 1.389e-12
Identity = 47/157 (29.94%), Postives = 83/157 (52.87%), Query Frame = 0
Query:   12 MQRLTIMKDNVLKKVERQMEQYPSLTMRSSLLDMEKKVNVPAPALFILGSSSLVLLLVLLVSMEGVALLVGLAYPLLGALKAIKVQEAHVIKFFIQYFLLFNALNLLETF--LPLSRLPLYYLGKLLFLAWAFNPKTQGARLVYGTL-RPLLLPHLG 165
            M +L   K+ +  K+ER             ++++EK+  V    +F +G+    +LL ++   E V  LVG  YP   + KAI          ++ Y+++++  NL E+   L LS +P Y+  K+ FL W+++P TQG+ ++Y TL +P + PH+G
Sbjct:    1 MDKLLEYKEKISAKLER----------YDKIVELEKQTGVDKFYIFCVGALLAGILLFVVGGEELVVGLVGFIYPAYMSFKAINTPGTTDDTQWLTYWVVYSFFNLTESITDLVLSWVPFYFFIKIAFLVWSYHPSTQGSNVIYNTLIKPYVAPHVG 147          
BLAST of EWM21760.1 vs. NCBI_GenBank
Match: gi|660966266|gb|KEP50802.1| (YOP1-Ypt-interacting-like protein [Rhizoctonia solani 123E])

HSP 1 Score: 75.0998 bits (183), Expect = 2.131e-12
Identity = 51/182 (28.02%), Postives = 98/182 (53.85%), Query Frame = 0
Query:    1 MSSGGAQGQTPMQRLTIMKDNVLKKVERQMEQYPSLTMRSSLLDMEKKVNVPAPALFILGSSSLVLLLVLLVSMEG-VALLVGLAYPLLGALKAIKVQEAHVIKFFIQYFLLFNALNLLETF---LPLSRLPLYYLGKLLFLAWAFNPKTQGARLVY-GTLRPLLLPHLGIALGASGAEQSR 177
            MS+   +    +Q+L+      + ++++++E+YP  T       +E++  +P  A  ++G+S+L++ L+ + +    V+ L+G A P   +LKAI+  +A     ++ Y+ +F   N LE+F   + L   P YY+ K  F+ W   P T+GAR V+   +RP++ P+  I  G + A+  R
Sbjct:    1 MSAEQVKAHPAVQQLSTQASFYVSQLDKELEKYPVFT------TLEQRTQIPK-AYGVIGASALIVFLIFVNAFAAPVSNLIGWALPAYLSLKAIESPQAEDDVQWLTYWTVFGFFNFLESFALRMVLYYFPYYYIFKTAFILWLQLPATRGARTVHQSVVRPVIAPY--ITTGPAPADSLR 173          
BLAST of EWM21760.1 vs. NCBI_GenBank
Match: gi|566007879|gb|ETI30790.1| (hypothetical protein F443_22117 [Phytophthora parasitica P1569] >gi|567945373|gb|ETK71184.1| hypothetical protein L915_21513 [Phytophthora parasitica] >gi|567973988|gb|ETL24635.1| hypothetical protein L916_21377 [Phytophthora parasitica] >gi|568003496|gb|ETL77844.1| hypothetical protein L917_21236 [Phytophthora parasitica] >gi|568033390|gb|ETM31098.1| hypothetical protein L914_21245 [Phytophthora parasitica] >gi|570326538|gb|ETO74486.1| hypothetical protein F444_09821 [Phytophthora parasitica P1976] >gi|570935323|gb|ETP00580.1| hypothetical protein F441_22011 [Phytophthora parasitica CJ01A1] >gi|570965629|gb|ETP28748.1| hypothetical protein F442_21981 [Phytophthora parasitica P10297] >gi|970637212|gb|KUF81343.1| Receptor expression-enhancing protein 5 [Phytophthora nicotianae])

HSP 1 Score: 74.3294 bits (181), Expect = 3.383e-12
Identity = 48/157 (30.57%), Postives = 82/157 (52.23%), Query Frame = 0
Query:   12 MQRLTIMKDNVLKKVERQMEQYPSLTMRSSLLDMEKKVNVPAPALFILGSSSLVLLLVLLVSMEGVALLVGLAYPLLGALKAIKVQEAHVIKFFIQYFLLFNALNLLE--TFLPLSRLPLYYLGKLLFLAWAFNPKTQGARLVYGTL-RPLLLPHLG 165
            M +L   K+ +  K+ER             ++++EK+  V    +F +G+    +LL ++   E V  LVG  YP   + KAI          ++ Y+++++  NL E  T L LS +P Y+  K+ FL W ++P TQG+ L+Y +L +P + PH+G
Sbjct:    1 MDKLMEYKEKISAKLER----------YDKIVELEKQTGVDKFYIFCVGALLAGILLFVVGGEELVVGLVGFIYPAYMSFKAINTPGTTDDTQWLTYWVVYSFFNLTESVTDLVLSWVPFYFFIKIGFLVWCYHPSTQGSNLIYNSLIKPYVAPHVG 147          
BLAST of EWM21760.1 vs. NCBI_GenBank
Match: gi|576992936|gb|EUC65611.1| (YOP1-Ypt-interacting-like protein [Rhizoctonia solani AG-3 Rhs1AP])

HSP 1 Score: 74.3294 bits (181), Expect = 3.489e-12
Identity = 50/182 (27.47%), Postives = 98/182 (53.85%), Query Frame = 0
Query:    1 MSSGGAQGQTPMQRLTIMKDNVLKKVERQMEQYPSLTMRSSLLDMEKKVNVPAPALFILGSSSLVLLLVLLVSMEG-VALLVGLAYPLLGALKAIKVQEAHVIKFFIQYFLLFNALNLLETF---LPLSRLPLYYLGKLLFLAWAFNPKTQGARLVY-GTLRPLLLPHLGIALGASGAEQSR 177
            MS+   +    +Q+L+      + ++++++E+YP  T       +E++  +P  A  ++G+S+L++ L+ + +    V+ L+G A P   +LKAI+  +A     ++ Y+ +F   N LE+F   + L   P YY+ K  F+ W   P T+GAR ++   +RP++ P+  I  G + A+  R
Sbjct:    1 MSAEQVKAHPAVQQLSTQASFYVSQLDKELEKYPVFT------TLEQRTQIPK-AYGVIGASALIVFLIFVNAFAAPVSNLIGWALPAYLSLKAIESPQAEDDVQWLTYWTVFGFFNFLESFALRMVLYYFPYYYIFKTAFILWLQLPATRGARTIHQSVVRPVIAPY--ITTGPAPADSLR 173          
BLAST of EWM21760.1 vs. NCBI_GenBank
Match: gi|924113771|emb|CUA77787.1| (Protein YOP1 [Ustilago maydis 521] [Rhizoctonia solani])

HSP 1 Score: 74.3294 bits (181), Expect = 4.006e-12
Identity = 49/169 (28.99%), Postives = 95/169 (56.21%), Query Frame = 0
Query:    1 MSSGGAQGQTPMQRLTIMKDNVLKKVERQMEQYPSLTMRSSLLDMEKKVNVPAPALFILGSSSLVLLLVLLVSMEG-VALLVGLAYPLLGALKAIKVQEAHVIKFFIQYFLLFNALNLLETF---LPLSRLPLYYLGKLLFLAWAFNPKTQGARLV-YGTLRPLLLPHL 164
            MS+   +    +Q+L+      + ++++++ +YP L      +++E++  VP  A  ++G+S+L++LL+ + +    V+ L+G A P   +LKAI+  +A     ++ Y+ +F   N LE+F   + L   P YY+ K  F+ W   P T+GAR V +  LRP++ P++
Sbjct:    1 MSAEQIKTHPAVQQLSTQASYYVSQLDKELGKYPVL------INLEQRTQVPK-AYGVIGASALIVLLIFVNAFAAPVSNLIGWALPAYLSLKAIESPQADDDVQWLTYWTVFGFFNFLESFALRMVLYYFPFYYIFKTAFILWLQLPATRGARTVHHSVLRPVIAPYV 162          
BLAST of EWM21760.1 vs. NCBI_GenBank
Match: gi|639560658|gb|KDN38438.1| (hypothetical protein RSAG8_09532, partial [Rhizoctonia solani AG-8 WAC10335])

HSP 1 Score: 75.0998 bits (183), Expect = 5.107e-12
Identity = 50/171 (29.24%), Postives = 97/171 (56.73%), Query Frame = 0
Query:   12 MQRLTIMKDNVLKKVERQMEQYPSLTMRSSLLDMEKKVNVPAPALFILGSSSLVLLLVLLVSMEG-VALLVGLAYPLLGALKAIKVQEAHVIKFFIQYFLLFNALNLLETF---LPLSRLPLYYLGKLLFLAWAFNPKTQGARLVY-GTLRPLLLPHLGIALGASGAEQSR 177
            +Q+L+      + ++++++ +YP L      +++E++  VP  A  ++G+S+L++LL+ + +    V+ L+G A P   +LKAI+  +A     ++ Y+ +F   N LE+F   + L   P YY+ K  F+ W   P T+GAR V+   +RP++ P+  +A G + A+  R
Sbjct:   59 VQQLSTQASYYVSQLDKELGKYPVL------INLEQRTQVPK-AYGVIGASALIVLLIFVNAFAAPVSNLIGWALPAYLSLKAIESPQAEDDVQWLTYWTVFGFFNFLESFALRMVLYYFPFYYIFKTAFILWLQLPATRGARTVHQSVIRPVIAPY--VATGPAPADSLR 220          
BLAST of EWM21760.1 vs. NCBI_GenBank
Match: gi|695415852|ref|XP_009526688.1| (hypothetical protein PHYSODRAFT_354597 [Phytophthora sojae] >gi|348677813|gb|EGZ17630.1| hypothetical protein PHYSODRAFT_354597 [Phytophthora sojae])

HSP 1 Score: 73.559 bits (179), Expect = 6.056e-12
Identity = 46/152 (30.26%), Postives = 83/152 (54.61%), Query Frame = 0
Query:   20 DNVLK---KVERQMEQYPSLTMRSSLLDMEKKVNVPAPALFILGSSSLVLLLVLLVSMEGVALLVGLAYPLLGALKAIKVQEAHVIKFFIQYFLLFNALNLLETF--LPLSRLPLYYLGKLLFLAWAFNPKTQGARLVYGTL-RPLLLPHLG 165
            D VL+   K+  ++E+Y        ++++EK+  V    +F +G+    +LL ++   E V  LVG  YP   + KAI          ++ Y++++   NL E+   L LS +P Y+  K+ FL W+++P TQG+ ++Y +L +P + PH+G
Sbjct:    2 DKVLEYKEKISAKLERY------EKIVELEKQTGVDKFYIFCVGALLAGILLFVVGGEELVVGLVGFIYPAYMSFKAINTPGTGDDTQWLTYWVVYAFFNLTESITDLVLSWIPFYFFFKIAFLVWSYHPSTQGSTIIYNSLIKPYVAPHVG 147          
BLAST of EWM21760.1 vs. NCBI_GenBank
Match: gi|1214712360|gb|OWZ23307.1| (putative membrane protein [Phytophthora megakarya])

HSP 1 Score: 73.1738 bits (178), Expect = 6.885e-12
Identity = 47/157 (29.94%), Postives = 81/157 (51.59%), Query Frame = 0
Query:   12 MQRLTIMKDNVLKKVERQMEQYPSLTMRSSLLDMEKKVNVPAPALFILGSSSLVLLLVLLVSMEGVALLVGLAYPLLGALKAIKVQEAHVIKFFIQYFLLFNALNLLETF--LPLSRLPLYYLGKLLFLAWAFNPKTQGARLVYGTL-RPLLLPHLG 165
            M +L   K+ +  K+ER             ++++EK+  V    +F +G+    +LL ++   E V  LVG  YP   + KAI          ++ Y++++   NL E+   L LS +P Y+  K+ FL W ++P TQG+ ++Y TL +P + PH+G
Sbjct:    1 MDKLLEYKEKISAKLER----------YEKVVELEKQTGVDKFYIFCVGALLAGILLFVVGGEELVVGLVGFIYPAYMSFKAINTPGTGDDTQWLTYWVVYAFFNLTESITDLFLSWIPFYFFFKIAFLVWTYHPSTQGSNVIYNTLIKPYVAPHVG 147          
The following BLAST results are available for this feature:
BLAST of EWM21760.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102093|gb|EWM21760.1|0.000e+0100.00TB2/DP1/HVA22-related protein [Nannochloropsis gad... [more]
gi|553188010|ref|XP_005854717.1|0.000e+0100.00peroxin-1, partial [Nannochloropsis gaditana CCMP5... [more]
gi|301100994|ref|XP_002899586.1|1.389e-1229.94conserved hypothetical protein [Phytophthora infes... [more]
gi|660966266|gb|KEP50802.1|2.131e-1228.02YOP1-Ypt-interacting-like protein [Rhizoctonia sol... [more]
gi|566007879|gb|ETI30790.1|3.383e-1230.57hypothetical protein F443_22117 [Phytophthora para... [more]
gi|576992936|gb|EUC65611.1|3.489e-1227.47YOP1-Ypt-interacting-like protein [Rhizoctonia sol... [more]
gi|924113771|emb|CUA77787.1|4.006e-1228.99Protein YOP1 [Ustilago maydis 521] [Rhizoctonia so... [more]
gi|639560658|gb|KDN38438.1|5.107e-1229.24hypothetical protein RSAG8_09532, partial [Rhizoct... [more]
gi|695415852|ref|XP_009526688.1|6.056e-1230.26hypothetical protein PHYSODRAFT_354597 [Phytophtho... [more]
gi|1214712360|gb|OWZ23307.1|6.885e-1229.94putative membrane protein [Phytophthora megakarya][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8943rna8943Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications