EWM21768.1, cds8909 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21768.1 vs. NCBI_GenBank
Match: gi|585102102|gb|EWM21768.1| (TRAM, LAG1 and CLN8 lipid-sensing domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 547.354 bits (1409), Expect = 0.000e+0 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0
Query: 1 MIKTLSMMFGEVGIIVNWWDVLVTVVFFSVVLLCWYQAMCSYFTQTSKDGQGPSQKQKAWFLSFFISCLSTPLGVYYLSRALSPEWDASEMLDTDAFSRSVLTLFWVYLIVDMAVGYFEYPGEFGLLSGWVHHIFYALFLGYAYMKGYSISFTHTLIMESSSIFLSGGRLFPRLRSDWAFGCLFLLFRVVYHLYLLLKLYSLPAPRGDLWPPVAGVWVLHLYWFRGWMQGMRRRAQQSKTGEASSSMASPCGDSRDPEGEPVKREKSA 268
MIKTLSMMFGEVGIIVNWWDVLVTVVFFSVVLLCWYQAMCSYFTQTSKDGQGPSQKQKAWFLSFFISCLSTPLGVYYLSRALSPEWDASEMLDTDAFSRSVLTLFWVYLIVDMAVGYFEYPGEFGLLSGWVHHIFYALFLGYAYMKGYSISFTHTLIMESSSIFLSGGRLFPRLRSDWAFGCLFLLFRVVYHLYLLLKLYSLPAPRGDLWPPVAGVWVLHLYWFRGWMQGMRRRAQQSKTGEASSSMASPCGDSRDPEGEPVKREKSA
Sbjct: 1 MIKTLSMMFGEVGIIVNWWDVLVTVVFFSVVLLCWYQAMCSYFTQTSKDGQGPSQKQKAWFLSFFISCLSTPLGVYYLSRALSPEWDASEMLDTDAFSRSVLTLFWVYLIVDMAVGYFEYPGEFGLLSGWVHHIFYALFLGYAYMKGYSISFTHTLIMESSSIFLSGGRLFPRLRSDWAFGCLFLLFRVVYHLYLLLKLYSLPAPRGDLWPPVAGVWVLHLYWFRGWMQGMRRRAQQSKTGEASSSMASPCGDSRDPEGEPVKREKSA 268
BLAST of EWM21768.1 vs. NCBI_GenBank
Match: gi|585101859|gb|EWM21604.1| (hypothetical protein Naga_100012g31 [Nannochloropsis gaditana]) HSP 1 Score: 126.331 bits (316), Expect = 3.852e-31 Identity = 73/219 (33.33%), Postives = 116/219 (52.97%), Query Frame = 0
Query: 54 SQKQKAWFLSFFISCLSTPLGVYYLSRALSPEWDASEML-DTDAFSRSVLTLFWVYLIVDMAVGYFEYPGEFGLLSGWVHHIFYALFLGYAYMKGYSISFTHTLIMESSSIFLSGGRLFPRLRSDWAFGCLFLLFRVVYHLYLLLKLYSLPAPRGDLWPPVAGVWVLHLYWFRGWMQGMRRRAQQSKTGEASSSM-----ASPCGDSRDPEGEPVKREK 266
+ K+ AW LS F S ++ L + L + + W +L D SR T F +LI+D+A+G YP + LLSGWVHH FY L +A +S+ F L +E + L+ G ++P+ RSDW FG FL+ R+ YHL+L + + + PR +W +A + LH+YWF W + RR+ K G+ +M A+ G+ + +G +++
Sbjct: 80 TPKRLAWLLSAFSSFITASLSMSALYQLFAQSWVIENVLFADDRLSRFTATFFIAFLILDLALGMRYYPSQIHLLSGWVHHCFYLGVLAWALHSHFSLGFCLFLPLEIPTFILAVGSIYPQRRSDWLFGMTFLITRICYHLWLFVLVREIKDPRLPVWVVIAVTFCLHIYWFGLWWKSYRRKYLLGKGGKKEGAMDGKGVAAAAGEQGNEDGGRKSKKE 298
BLAST of EWM21768.1 vs. NCBI_GenBank
Match: gi|1134794693|gb|OMJ09798.1| (hypothetical protein AYI70_g10724 [Smittium culicis] >gi|1134816263|gb|OMJ22259.1| hypothetical protein AYI70_g2995 [Smittium culicis]) HSP 1 Score: 105.145 bits (261), Expect = 9.705e-24 Identity = 65/204 (31.86%), Postives = 101/204 (49.51%), Query Frame = 0
Query: 43 FTQTSKDGQGPSQKQKAWFLSFFISCLS-TPLGVYYLSRALSPEWDASEMLDTDAFSRSVLTLFWVYLIVDMAVGYFEYPGEFGLLSGWVHHIFYALFLGYAYMKGYSISFTHTLIMESSSIFLSGGRLFPRLRSDWAFGCLFLLFRVVYHLYLLLKLYSLPAPRGDLWPPVAGVWVLHLYWFRGWMQGMRRRAQQSKTGEASS 245
F K+ ++KQ AW L+ F+SC++ T + YL D + ++ +D+FS F YL D+A+G Y F ++G+ HH Y L + Y + GYS F IME +I L+ G + LR DW F F R++ H+ LL + YS P +W VA LH+YWF +++ +R ++ K +S
Sbjct: 25 FYIVRKNSSYSTEKQLAWVLT-FVSCVTVTCASLPYLFLLFKNNLDVTRLVSSDSFSLLTCGFFEAYLFWDLAIGMKYYRSTFDFVTGYFHHAAYILLVYYVAISGYSAIFVLCCIMELPTIVLAVGSIHKNLRKDWLFASCFFSTRLLLHVVLLYRFYS-HFPDRLVWKLVASSLPLHIYWFSNFIKQQKRIFKKRKLAALNS 226
BLAST of EWM21768.1 vs. NCBI_GenBank
Match: gi|1134792911|gb|OMJ08775.1| (hypothetical protein AYI69_g10937 [Smittium culicis]) HSP 1 Score: 104.76 bits (260), Expect = 1.275e-23 Identity = 65/204 (31.86%), Postives = 101/204 (49.51%), Query Frame = 0
Query: 43 FTQTSKDGQGPSQKQKAWFLSFFISCLS-TPLGVYYLSRALSPEWDASEMLDTDAFSRSVLTLFWVYLIVDMAVGYFEYPGEFGLLSGWVHHIFYALFLGYAYMKGYSISFTHTLIMESSSIFLSGGRLFPRLRSDWAFGCLFLLFRVVYHLYLLLKLYSLPAPRGDLWPPVAGVWVLHLYWFRGWMQGMRRRAQQSKTGEASS 245
F K+ ++KQ AW L+ F+SC++ T + YL D + ++ +D+FS F YL D+A+G Y F ++G+ HH Y L + Y + GYS F IME +I L+ G + LR DW F F R++ H+ LL + YS P +W VA LH+YWF +++ +R ++ K +S
Sbjct: 25 FYIVRKNSSYSTEKQLAWVLT-FVSCVTVTCASLPYLFLLFKNNLDVTRLISSDSFSLLTCGFFEAYLFWDLAIGMKYYRSTFDFITGYFHHAAYILLVYYVAVSGYSAIFVLCCIMELPTIVLAVGSIHKNLRKDWLFASCFFSTRLLLHVVLLYRFYSY-FPDRLVWKLVASSLPLHIYWFYNFIKQQKRIFKKRKLAALNS 226
BLAST of EWM21768.1 vs. NCBI_GenBank
Match: gi|1132416395|gb|OLY78402.1| (hypothetical protein AYI68_g7549 [Smittium mucronatum]) HSP 1 Score: 104.375 bits (259), Expect = 1.880e-23 Identity = 66/204 (32.35%), Postives = 99/204 (48.53%), Query Frame = 0
Query: 43 FTQTSKDGQGPSQKQKAWFLSFFISCLS-TPLGVYYLSRALSPEWDASEMLDTDAFSRSVLTLFWVYLIVDMAVGYFEYPGEFGLLSGWVHHIFYALFLGYAYMKGYSISFTHTLIMESSSIFLSGGRLFPRLRSDWAFGCLFLLFRVVYHLYLLLKLYSLPAPRGDLWPPVAGVWVLHLYWFRGWMQGMRRRAQQSKTGEASS 245
F K+ ++KQ AW L+ F+SC++ T + YL D + + +D+FS F YL D+A+G Y F L++G+ HH Y L + Y + GYS F IME +I L+ G + +R DW F F R++ H+ LL + YS P +W VA LHLYWF +++ +R + K S
Sbjct: 25 FFIVRKNSSYTTEKQLAWVLT-FVSCVTVTCASLPYLYLLFKNNLDVTRCISSDSFSLLTCGFFEAYLFWDLAIGLRYYRSTFDLVTGYFHHGLYILMVYYVSVIGYSAIFVLCCIMELPTIVLAVGCINKNMRKDWLFASCFFSTRLLLHVVLLYRFYSY-FPDRLVWKLVASSLPLHLYWFSNFIKQQKRLYKNRKNASVVS 226
BLAST of EWM21768.1 vs. NCBI_GenBank
Match: gi|585107299|gb|EWM25533.1| (hypothetical protein Naga_100032g19 [Nannochloropsis gaditana]) HSP 1 Score: 101.293 bits (251), Expect = 1.105e-21 Identity = 67/190 (35.26%), Postives = 102/190 (53.68%), Query Frame = 0
Query: 56 KQKAWFLSFFISCLSTPLG-VYYLSRALSPE-WDASEML-DTDAFSRSVLTLFWVYLIVDMAVGYFEYPGEFGLLSGWVHHIFYALFLGYAYMKGYSISFTHTLIMESSSIFLSGGRLFPRLRSDWAFGCLFLLFRVVYHLYLLLKLYSLPAPRGDLWPPVAGVWVLHLYWFRGWM-QGMRRRAQQSKTG 241
K+KAW +S S L LG + Y+ R + +D +M+ D S V++ F +L++D+ VG YP E L+GW HH Y +A + SIS T+IME ++ ++ GRL +R+D+ FG F R+VY + KL +PR +WP LHL+WF+G++ Q MR R + S+ G
Sbjct: 74 KRKAWIMSVLCS-LGMSLGSLPYVYRLVYIHGFDTGKMVYADDRLSVFVMSFFMTFLVLDIVVGLRIYPSEISFLTGWFHHSLYMCACLWAMIHQISISAVATMIMEVPTLVMALGRLDKSMRNDFLFGSTFFATRIVYLGIYIYKLMCDVSPRVVVWPVCLPAMALHLFWFQGFIQQQMRLRTRSSEAG 262
BLAST of EWM21768.1 vs. NCBI_GenBank
Match: gi|757326779|gb|KIR32834.1| (hypothetical protein I352_04769 [Cryptococcus gattii VGII MMRL2647]) HSP 1 Score: 102.449 bits (254), Expect = 1.925e-21 Identity = 73/245 (29.80%), Postives = 115/245 (46.94%), Query Frame = 0
Query: 26 VFFSV----VLLCWYQAMCSYFTQTSKDGQGPSQKQKAWFLS----FFISCLSTPLGVYYLSRALSPEWDASEMLDTDAFSRSVLTLFWVYLIVDMAVGYFEYPGEFGLLSGWVHHIFYALFLGYAYMKGYSISFTHTLIMESSSIFLSGGRLFPRLRSDWAFGCLFLLFRVVYHLYLL---LKLYSLPAPRGDLWPPV--AGVWVLHLYWFRGWMQGMRRRAQQSKTG-EASSSMASPCGDSRD 256
+FFS+ + Y ++ YF +++Q+A+ LS +F++ S P Y LS ++ ++ A R + F YL D+ +GYF YP + GLL+GW+HH+ Y +GY +S F IME + L+ L+P +R D F F +FR+ +H YLL L S G P + A LH+ WF+G + G RR +SK +++ + S G D
Sbjct: 20 LFFSIPLFLIFFLIYTSVAPYFA---------TERQRAYILSTISSWFMTLASLPFSWKYARHGLSTIYEEGQIGWMGALGRVSVVFFATYLFSDLVIGYFRYPSQVGLLTGWIHHVVYIGLMGYLLNTRHSPVFLTGAIMELPTFDLAMSNLYPSVRHDLRFLASFFIFRIAFHAYLLGDCLHSSSRTVTDGSWVPSIMLALAGALHVMWFKGGVTGYLRRLGRSKAKMDSAEELCSTMGGIPD 255
BLAST of EWM21768.1 vs. NCBI_GenBank
Match: gi|757340669|gb|KIR46612.1| (hypothetical protein I312_04099 [Cryptococcus gattii CA1280]) HSP 1 Score: 102.449 bits (254), Expect = 1.945e-21 Identity = 72/239 (30.13%), Postives = 111/239 (46.44%), Query Frame = 0
Query: 26 VFFSV----VLLCWYQAMCSYFTQTSKDGQGPSQKQKAWFLS----FFISCLSTPLGVYYLSRALSPEWDASEMLDTDAFSRSVLTLFWVYLIVDMAVGYFEYPGEFGLLSGWVHHIFYALFLGYAYMKGYSISFTHTLIMESSSIFLSGGRLFPRLRSDWAFGCLFLLFRVVYHLYLL---LKLYSLPAPRGDLWPPV--AGVWVLHLYWFRGWMQGMRRRAQQSKTGEASSSMASPC 251
+FFS+ + Y ++ YF +++Q+A+ LS +F++ S P + L ++ + A R + F YL D+ +GYF YP + GLL+GW+HH Y +GY +S F IME + L+ L+P +R D F F +FR+V+H YLL L+ S G P + A LH+ WF+G + G RR +SK + S PC
Sbjct: 20 LFFSIPLFLIFFLIYISVAPYFA---------TERQRAYILSTMSSWFMTLASLPFAWKFARHGLGTIYEEGQNGWMGALGRVTVVFFATYLFSDLVIGYFRYPSQVGLLTGWIHHAVYIGLMGYLLNTRHSPVFLTGAIMELPTFDLAMSNLYPSVRHDLRFLASFFIFRIVFHAYLLGDCLRSSSRTVTDGSWVPSIMLALAGALHVMWFKGGVTGYLRRLGRSKA--KADSAEEPC 247
BLAST of EWM21768.1 vs. NCBI_GenBank
Match: gi|686628883|gb|KGB79683.1| (hypothetical protein CNBG_5521 [Cryptococcus gattii VGII R265] >gi|757322736|gb|KIR28814.1| hypothetical protein I309_02309 [Cryptococcus gattii VGII LA55] >gi|757333204|gb|KIR39237.1| hypothetical protein I313_04838 [Cryptococcus gattii VGII Ram5] >gi|757365356|gb|KIR71161.1| hypothetical protein I310_05052 [Cryptococcus gattii VGII CA1014] >gi|757389339|gb|KIR94659.1| hypothetical protein I304_00978 [Cryptococcus gattii VGII CBS 10090] >gi|757395518|gb|KIS00816.1| hypothetical protein L804_02237 [Cryptococcus gattii VGII 2001/935-1] >gi|761936734|gb|KIY57525.1| hypothetical protein I307_03017 [Cryptococcus gattii VGII 99/473]) HSP 1 Score: 102.449 bits (254), Expect = 1.964e-21 Identity = 73/245 (29.80%), Postives = 115/245 (46.94%), Query Frame = 0
Query: 26 VFFSV----VLLCWYQAMCSYFTQTSKDGQGPSQKQKAWFLS----FFISCLSTPLGVYYLSRALSPEWDASEMLDTDAFSRSVLTLFWVYLIVDMAVGYFEYPGEFGLLSGWVHHIFYALFLGYAYMKGYSISFTHTLIMESSSIFLSGGRLFPRLRSDWAFGCLFLLFRVVYHLYLL---LKLYSLPAPRGDLWPPV--AGVWVLHLYWFRGWMQGMRRRAQQSKTG-EASSSMASPCGDSRD 256
+FFS+ + Y ++ YF +++Q+A+ LS +F++ S P Y LS ++ ++ A R + F YL D+ +GYF YP + GLL+GW+HH+ Y +GY +S F IME + L+ L+P +R D F F +FR+ +H YLL L S G P + A LH+ WF+G + G RR +SK +++ + S G D
Sbjct: 20 LFFSIPLFLIFFLIYTSVAPYFA---------TERQRAYILSTISSWFMTLASLPFSWKYARHGLSTIYEEGQIGWMGALGRVSVVFFATYLFSDLVIGYFRYPSQVGLLTGWIHHVVYIGLMGYLLNTRHSPVFLTGAIMELPTFDLAMSNLYPSVRHDLRFLASFFIFRIAFHAYLLGDCLHSSSRTVTDGSWVPSIMLALAGALHVMWFKGGVTGYLRRLGRSKAKMDSAEELCSTMGGIPD 255
BLAST of EWM21768.1 vs. NCBI_GenBank
Match: gi|757354018|gb|KIR59848.1| (hypothetical protein I314_04283 [Cryptococcus gattii CA1873]) HSP 1 Score: 100.523 bits (249), Expect = 1.080e-20 Identity = 73/239 (30.54%), Postives = 111/239 (46.44%), Query Frame = 0
Query: 26 VFFSV----VLLCWYQAMCSYFTQTSKDGQGPSQKQKAWFLS----FFISCLSTPLGVYYLSRALSPEWDASEMLDTDAFSRSVLTLFWVYLIVDMAVGYFEYPGEFGLLSGWVHHIFYALFLGYAYMKGYSISFTHTLIMESSSIFLSGGRLFPRLRSDWAFGCLFLLFRVVYHLYLLLK-LYSLPAPRGDL-WPP---VAGVWVLHLYWFRGWMQGMRRRAQQSKTGEASSSMASPC 251
+FFS+ + Y ++ YF +++Q+A+ LS +F++ S P + L ++ + A R + F YL D+ +GYF YP + GLL+GW+HH Y +GY +S F IME + L+ L+P +R D F F +FR+V+H YLL L S D W P +A LH+ WF+G + G RR +SK + S PC
Sbjct: 20 LFFSIPLFLIFFLIYTSVAPYFA---------TERQRAYILSTMSSWFMTLASLPFAWKFARHGLGTIYEEGQNGWMGALGRVTVVFFATYLFSDLVIGYFRYPSQVGLLTGWIHHAVYIGLMGYLLNTRHSPVFLTGAIMELPTFDLAMSNLYPSVRHDLRFLASFFIFRIVFHAYLLGDCLRSSSRTVTDCSWVPSIMLALAGALHVMWFKGGVTGYLRRLGRSKA--KADSAEEPC 247 The following BLAST results are available for this feature:
BLAST of EWM21768.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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