EWM21762.1, cds8906 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21762.1 vs. NCBI_GenBank
Match: gi|585102096|gb|EWM21762.1| (hypothetical protein Naga_100298g6 [Nannochloropsis gaditana]) HSP 1 Score: 236.113 bits (601), Expect = 8.657e-79 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 Query: 1 MALPCTTECCAPCCGIFSIIGFLFLIILGIIVDKQPIFVHGVTEPHRSAVACYGGAGIYAGTLALCVVAWMYDKKKKEHRAATAGLLKEEEHVSLNIQRPGSYDVGTEMTRVPA 114 MALPCTTECCAPCCGIFSIIGFLFLIILGIIVDKQPIFVHGVTEPHRSAVACYGGAGIYAGTLALCVVAWMYDKKKKEHRAATAGLLKEEEHVSLNIQRPGSYDVGTEMTRVPA Sbjct: 1 MALPCTTECCAPCCGIFSIIGFLFLIILGIIVDKQPIFVHGVTEPHRSAVACYGGAGIYAGTLALCVVAWMYDKKKKEHRAATAGLLKEEEHVSLNIQRPGSYDVGTEMTRVPA 114
BLAST of EWM21762.1 vs. NCBI_GenBank
Match: gi|585102097|gb|EWM21763.1| (hypothetical protein Naga_100298g6 [Nannochloropsis gaditana] >gi|585102098|gb|EWM21764.1| hypothetical protein Naga_100298g6 [Nannochloropsis gaditana]) HSP 1 Score: 214.542 bits (545), Expect = 1.979e-70 Identity = 104/108 (96.30%), Postives = 104/108 (96.30%), Query Frame = 0 Query: 1 MALPCTTECCAPCCGIFSIIGFLFLIILGIIVDKQPIFVHGVTEPHRSAVACYGGAGIYAGTLALCVVAWMYDKKKKEHRAATAGLLKEEEHVSLNIQRPGSYDVGTE 108 MALPCTTECCAPCCGIFSIIGFLFLIILGIIVDKQPIFVHGVTEPHRSAVACYGGAGIYAGTLALCVVAWMYDKKKKEHRAATAGLLKEEEHVSLNIQRPGSY T Sbjct: 1 MALPCTTECCAPCCGIFSIIGFLFLIILGIIVDKQPIFVHGVTEPHRSAVACYGGAGIYAGTLALCVVAWMYDKKKKEHRAATAGLLKEEEHVSLNIQRPGSYGATTR 108
BLAST of EWM21762.1 vs. NCBI_GenBank
Match: gi|953499933|emb|CEG38574.1| (hypothetical protein PHALS_08638 [Plasmopara halstedii]) HSP 1 Score: 56.6102 bits (135), Expect = 4.932e-8 Identity = 23/62 (37.10%), Postives = 38/62 (61.29%), Query Frame = 0 Query: 13 CCGIFSIIGFLFLIILGIIVDKQPIFVHGVTEPHRSAVACYGGAGIYAGTLALCVVAWMYDK 74 C IFS IGF+FL+++G ++ QPI++H P+ A +C+ A +YA + +C W +K Sbjct: 7 CGTIFSFIGFVFLVVVGCLLKLQPIYIHNAKTPNSGANSCFEAAMLYAVAMGVCYTLWRKEK 68
BLAST of EWM21762.1 vs. NCBI_GenBank
Match: gi|673021756|ref|XP_008864839.1| (hypothetical protein H310_02923 [Aphanomyces invadans] >gi|574479770|gb|ETW06764.1| hypothetical protein H310_02923 [Aphanomyces invadans]) HSP 1 Score: 55.8398 bits (133), Expect = 1.090e-7 Identity = 26/78 (33.33%), Postives = 45/78 (57.69%), Query Frame = 0 Query: 13 CCGIFSIIGFLFLIILGIIVDKQPIFVHGVTEPHRSAVACYGGAGIYAGTLALCVVAWMYDKKKKEHRAATAGLLKEE 90 CC IFS+ G FL+ +G ++ QP F+ V P SA +C+ AG+YAG ++ W ++ K +++ G +K++ Sbjct: 5 CCSIFSLAGTTFLLCMGALLRLQPEFIRDVHTPKSSANSCFVSAGLYAGVFVGSMILWRREQHVKG--SSSVGEIKDD 80
BLAST of EWM21762.1 vs. NCBI_GenBank
Match: gi|1210524972|dbj|GAX16164.1| (hypothetical protein FisN_3Hh355 [Fistulifera solaris]) HSP 1 Score: 55.0694 bits (131), Expect = 1.628e-7 Identity = 23/70 (32.86%), Postives = 36/70 (51.43%), Query Frame = 0 Query: 13 CCGIFSIIGFLFLIILGIIVDKQPIFVHGVTEPHRSAVACYGGAGIYAGTLALCVVAWMYDKKKKEHRAA 82 CC +S GFLF + +G++V QP F+ G+ + + +G G++ T + YD K KE AA Sbjct: 11 CCAFYSFTGFLFTLWVGVMVHSQPFFIAGIEDAEEARANAFGAMGMFLVTFFASIAGIWYDSKNKESVAA 80 The following BLAST results are available for this feature:
BLAST of EWM21762.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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