EWM29807.1, cds890 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29807.1 vs. NCBI_GenBank
Match: gi|585112388|gb|EWM29807.1| (gun4 domain protein [Nannochloropsis gaditana]) HSP 1 Score: 507.679 bits (1306), Expect = 0.000e+0 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
Query: 1 MRATKRVGASYLGLILLSSLHQVAAFSPLAVPGASSGMLSTHSRGTLKVKPSLPCRTLLSTVSESTDAPSSKKTAPTMEKDVLKSECGMDYVPLANMLLIGDFKGADQFTRDALIQIAGENARKRGYVYFTEVKGLPEADMATIEKLWLKYSKGKFGYTVQRAIWNQVTVGKDFERFCRKIGWNTVENGIERKLKWFGKSEFIYDLEKAPVGHLPLTSALRGTSLLKNLLTYPLWATEWNKEEKKE 246
MRATKRVGASYLGLILLSSLHQVAAFSPLAVPGASSGMLSTHSRGTLKVKPSLPCRTLLSTVSESTDAPSSKKTAPTMEKDVLKSECGMDYVPLANMLLIGDFKGADQFTRDALIQIAGENARKRGYVYFTEVKGLPEADMATIEKLWLKYSKGKFGYTVQRAIWNQVTVGKDFERFCRKIGWNTVENGIERKLKWFGKSEFIYDLEKAPVGHLPLTSALRGTSLLKNLLTYPLWATEWNKEEKKE
Sbjct: 1 MRATKRVGASYLGLILLSSLHQVAAFSPLAVPGASSGMLSTHSRGTLKVKPSLPCRTLLSTVSESTDAPSSKKTAPTMEKDVLKSECGMDYVPLANMLLIGDFKGADQFTRDALIQIAGENARKRGYVYFTEVKGLPEADMATIEKLWLKYSKGKFGYTVQRAIWNQVTVGKDFERFCRKIGWNTVENGIERKLKWFGKSEFIYDLEKAPVGHLPLTSALRGTSLLKNLLTYPLWATEWNKEEKKE 246
BLAST of EWM29807.1 vs. NCBI_GenBank
Match: gi|1210516797|dbj|GAX24286.1| (hypothetical protein FisN_4Lh011 [Fistulifera solaris]) HSP 1 Score: 228.409 bits (581), Expect = 5.520e-72 Identity = 117/213 (54.93%), Postives = 150/213 (70.42%), Query Frame = 0
Query: 34 ASSGMLSTHSRGTLKVKPS-LPCRTLLSTVSESTDAP--SSKKTAPTMEKDVLKSECGMDYVPLANMLLIGDFKGADQFTRDALIQIAGENARKRGYVYFTEVKGLPEADMATIEKLWLKYSKGKFGYTVQRAIWNQVTVGKDFERFCRKIGWNTVENGIERKLKWFGKSEFIYDLEKAPVGHLPLTSALRGTSLLKNLLTYPLWATE-WNKE 242
ASS ++S + +L +P+ + CR++ +T + A SS + A L S CGMDYVPLA ML GD ADQFTRDALI+I+G A+ R +VYFT+VK +P D+AT+E+LW K+SKGKFGY+VQ+ WNQ DFE FCRKIGW T + +ERK +WFG SEFIYD++KAP GHLPLTSALRGTSL+K+LL +P+W E W KE
Sbjct: 15 ASSSLVSAFTTPSLVARPTGVVCRSMTATAEATPAAEEASSSEDADIQIPTNLPSACGMDYVPLATMLATGDLVAADQFTRDALIEISGAKAKGRNFVYFTDVKNIPSIDLATMERLWNKFSKGKFGYSVQKKKWNQSK--GDFEVFCRKIGWTTTDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKSLLKHPVWDNEDWKKE 225
BLAST of EWM29807.1 vs. NCBI_GenBank
Match: gi|1210512492|dbj|GAX28349.1| (hypothetical protein FisN_4Hh011 [Fistulifera solaris]) HSP 1 Score: 224.557 bits (571), Expect = 1.692e-70 Identity = 115/214 (53.74%), Postives = 150/214 (70.09%), Query Frame = 0
Query: 34 ASSGMLSTHSRGTLKVKP-SLPCRTLLSTVSESTDAPSSKKTAPTMEKDV---LKSECGMDYVPLANMLLIGDFKGADQFTRDALIQIAGENARKRGYVYFTEVKGLPEADMATIEKLWLKYSKGKFGYTVQRAIWNQVTVGKDFERFCRKIGWNTVENGIERKLKWFGKSEFIYDLEKAPVGHLPLTSALRGTSLLKNLLTYPLWATE-WNKE 242
ASS ++S + + +P S+ CR + +T ++ A + ++ E + L S CGMDYVPLA ML GD ADQFTRDALI+I+G A+ R +VYFT+VK +P D+AT+E+LW K+SKGKFGY+VQ+ WNQ DFE FCRKIGW T + +ERK +WFG SEFIYD++KAP GHLPLTSALRGTSL+K+LL +P+W E W KE
Sbjct: 15 ASSSLVSAFTTPSFAARPTSVVCRPMTATAEATSAAEEAASSSEDAEIQIPTNLPSACGMDYVPLATMLATGDLVAADQFTRDALIEISGAKAKGRNFVYFTDVKNIPSTDLATMERLWNKFSKGKFGYSVQKKKWNQSK--GDFEVFCRKIGWTTTDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKSLLKHPVWDNEDWKKE 226
BLAST of EWM29807.1 vs. NCBI_GenBank
Match: gi|873229245|emb|CEM13675.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 207.608 bits (527), Expect = 2.722e-63 Identity = 116/252 (46.03%), Postives = 154/252 (61.11%), Query Frame = 0
Query: 12 LGLILLSSLHQVAAFSPLAVPGASSGMLSTHSRGTLKVKPSLPCRTLLSTVSESTDAPSS----------------KKTAPTME----KDVLKSECGMDYVPLANMLLIGDFKGADQFTRDALIQIAGENARKRGYVYFTEVKGLPEADMATIEKLWLKYSKGKFGYTVQRAIWNQVTVGKDFERFCRKIGWNTVENGIERKLKWFGKSEFIYDLEKAPVGHLPLTSALRGTSLLKNLLTYPLWATEWNKEE 243
+G+ L ++ Q+ + S L+ S ST SR L+ P LS S TDAP S KT +E + L SE G DY PLA ML DFK ADQFTRD LI++AG A+ R YVYFTEV+ +P DMATIE+LWL YS G+FGY+VQ+ +W T DF+ FC K+GW+ +E+GIER +WFG++EF+YDL+KAP GHLPLT+ LRGT+L K +L +P W ++ +E+
Sbjct: 19 IGIYLCAAFQQLPSPSLLS---RRSPFSSTLSR--LRTA-RFPSSVALSASSTVTDAPPSIAPSAIESSPLPDLEPSKTDAVVEVASIPEHLPSEAGKDYRPLACMLAKQDFKEADQFTRDMLIELAGPGAQMRKYVYFTEVRKIPVTDMATIERLWLHYSNGRFGYSVQKKVWK--TCRADFQTFCSKVGWSKMEDGIERLRRWFGENEFMYDLDKAPRGHLPLTNTLRGTTLFKEVLNHPAWDSDVLQEK 262
BLAST of EWM29807.1 vs. NCBI_GenBank
Match: gi|397567193|gb|EJK45449.1| (hypothetical protein THAOC_35937 [Thalassiosira oceanica]) HSP 1 Score: 206.068 bits (523), Expect = 3.359e-63 Identity = 108/203 (53.20%), Postives = 137/203 (67.49%), Query Frame = 0
Query: 52 SLPCRTLLST------VSESTDAPSSKKTAPTMEKDV-----LKSECGMDYVPLANMLLIGDFKGADQFTRDALIQIAGENARKRGYVYFTEVKGLPEADMATIEKLWLKYSKGKFGYTVQRAIWNQVTVGKDFERFCRKIGWNTVENGIERKLKWFGKSEFIYDLEKAPVGHLPLTSALRGTSLLKNLLTYPLWAT-EWNKE 242
++PC T+LS +++S P+S +E DV L S+ GMDY+PLA ML G ADQFTRDALI IAG + R +VYFTEVK +P D+ATIE+LW K+S GKFGY+VQ+ + Q DFE FC+KIGW T E +ERK +WFG SEF YD++KAP GHLPLTSALRGTSL+K LL +P+W +W K+
Sbjct: 28 NVPC-TILSEAATAEKMADSGKPPASSGPDANIE-DVEIPTNLPSDVGMDYIPLATMLATGQLAEADQFTRDALIVIAGSKDKGRDFVYFTEVKDIPSTDLATIERLWNKFSGGKFGYSVQKKKFRQSKF--DFEVFCKKIGWTTTEGDVERKKRWFGASEFTYDVKKAPEGHLPLTSALRGTSLIKELLAHPVWDNDDWKKD 226
BLAST of EWM29807.1 vs. NCBI_GenBank
Match: gi|1072229306|gb|OEU14041.1| (GUN4-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 203.756 bits (517), Expect = 3.788e-63 Identity = 100/166 (60.24%), Postives = 127/166 (76.51%), Query Frame = 0
Query: 83 LKSECGMDYVPLANMLLIGDFKGADQFTRDALIQIAGENARKRGYVYFTEVKGLPEADMATIEKLWLKYSKGKFGYTVQRAIWNQVTVGK-DFERFCRKIGWNTVENGIERKLKWFGKSEFIYDLEKAPVGHLPLTSALRGTSLLKNLLTYPLWAT-EWNKEEKKE 246
L S+ GMDY+PLA ML G F+ ADQFTRDALI I+G R +VYFT+VK +P D+ATIE+LW K+SKGKFGYTVQ+ Q+ + K DFE FC KIGW T+++ +ERK +WFG SEFIY+++KAP GHLPLTSALRGTSLLK LL +P++ +W KE +K+
Sbjct: 6 LPSDVGMDYIPLATMLATGQFEEADQFTRDALITISGAKDLGREFVYFTDVKRIPNTDLATIERLWNKFSKGKFGYTVQK---KQMRLAKGDFETFCTKIGWTTMDDDVERKRRWFGTSEFIYNVKKAPKGHLPLTSALRGTSLLKKLLDHPVFENDDWKKEPEKK 168
BLAST of EWM29807.1 vs. NCBI_GenBank
Match: gi|224007735|ref|XP_002292827.1| (hypothetical protein THAPSDRAFT_263658, partial [Thalassiosira pseudonana CCMP1335] >gi|220971689|gb|EED90023.1| hypothetical protein THAPSDRAFT_263658, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 202.986 bits (515), Expect = 4.984e-63 Identity = 96/153 (62.75%), Postives = 115/153 (75.16%), Query Frame = 0
Query: 83 LKSECGMDYVPLANMLLIGDFKGADQFTRDALIQIAGENARKRGYVYFTEVKGLPEADMATIEKLWLKYSKGKFGYTVQRAIWNQVTVGKDFERFCRKIGWNTVENGIERKLKWFGKSEFIYDLEKAPVGHLPLTSALRGTSLLKNLLTYPLW 235
L S+ GMDYVPLA ML G ADQFTRDALI +AG A+ R +VYFTEVK +P D+ATIE+LW K+S GKFGY+VQ+ IW + DFE +C KIGW T + IERK +WFG SEF YD++KAP GHLPLTSALRGTSL+K LL +P+W
Sbjct: 1 LPSDVGMDYVPLATMLATGQLAEADQFTRDALIVLAGSKAKGRDFVYFTEVKNIPSTDLATIERLWTKFSGGKFGYSVQKQIWKKSK--GDFEVWCNKIGWTTKDGEIERKKRWFGASEFTYDVKKAPKGHLPLTSALRGTSLIKELLNHPVW 151
BLAST of EWM29807.1 vs. NCBI_GenBank
Match: gi|676394639|ref|XP_009040597.1| (hypothetical protein AURANDRAFT_55095 [Aureococcus anophagefferens] >gi|323448789|gb|EGB04683.1| hypothetical protein AURANDRAFT_55095 [Aureococcus anophagefferens]) HSP 1 Score: 188.734 bits (478), Expect = 2.494e-56 Identity = 98/177 (55.37%), Postives = 120/177 (67.80%), Query Frame = 0
Query: 70 SSKKTAPTMEKDVLKSECGMDYVPLANMLLIGDFKGADQFTRDALIQIAGENARKRGYVYFTEVKGLPEADMATIEKLWLKYSKGKFGYTVQRAIWN-QVTVGKDFERFCRKIGWNTVE--NGIERKLKWFGKSEFIYDLEKAPVGHLPLTSALRGTSLLKNLLTYPLWAT-EWNKE 242
S+ AP ++ + L S G+DY PL L IGD+ ADQ TRD LI++AGE A KRGYVY+TE + LP D+AT+E LWL YS GKFGYTVQ+ +W Q V F+ FC KIGW T + G RK +WFG SEF Y L+KAP HLPLTSALRGT LLK LL + +W T EW ++
Sbjct: 47 STLARAP-LDPNCLVSAKGIDYEPLMEQLRIGDYMAADQTTRDVLIEMAGEEAMKRGYVYWTEARQLPNEDLATVENLWLHYSDGKFGYTVQKNVWRLQKGV---FDNFCDKIGWTTTDEITGQPRKRRWFGDSEFFYSLDKAPKAHLPLTSALRGTQLLKALLQHQVWETEEWKRD 219
BLAST of EWM29807.1 vs. NCBI_GenBank
Match: gi|676393553|ref|XP_009040054.1| (hypothetical protein AURANDRAFT_14567, partial [Aureococcus anophagefferens] >gi|323449263|gb|EGB05152.1| hypothetical protein AURANDRAFT_14567, partial [Aureococcus anophagefferens]) HSP 1 Score: 178.333 bits (451), Expect = 2.262e-53 Identity = 88/151 (58.28%), Postives = 108/151 (71.52%), Query Frame = 0
Query: 85 SECGMDYVPLANMLLIGDFKGADQFTRDALIQIAGENARKRGYVYFTEVKGLPEADMATIEKLWLKYSKGKFGYTVQRAIWN-QVTVGKDFERFCRKIGWNTVEN--GIERKLKWFGKSEFIYDLEKAPVGHLPLTSALRGTSLLKNLLTY 232
S G+DY PL L +GD++ ADQ TRD LI++AGE A KRGYVY+TE + LP+ D+AT+E LWL YS GKFGYTVQ+ +W Q V F++FC KIGW T++ G RK +WFG SEF Y L+ AP HLPLTSALRGT LLK LL +
Sbjct: 1 SAKGIDYEPLMEQLRVGDYRMADQTTRDVLIEMAGEEAMKRGYVYWTEARQLPDEDLATVENLWLHYSDGKFGYTVQKNVWRLQKGV---FDKFCDKIGWTTIDEVTGQARKRRWFGDSEFSYKLDDAPKAHLPLTSALRGTQLLKALLQH 148
BLAST of EWM29807.1 vs. NCBI_GenBank
Match: gi|922853196|gb|KOO21828.1| (tetrapyrrole-binding protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 177.178 bits (448), Expect = 5.325e-52 Identity = 95/203 (46.80%), Postives = 121/203 (59.61%), Query Frame = 0
Query: 34 ASSGMLS-THSRGTLKVKPSLPCRTLLSTVSESTDAPSSKKTAPTMEKDVLKSECGMDYVPLANMLLIGDFKGADQFTRDALIQIAGENARKRGYVYFTEVKGLPEADMATIEKLWLKYSKGKFGYTVQRAIWNQVTVGKDFERFCRKIGWNTVENGIERKLKWFGKSEFIYDLEKAPVGHLPLTSALRGTSLLKNLLTYPLW 235
A + MLS + G + ++P RT + + AP +E+ +++ CG DYVPL L G+F+ ADQ TRDALI +AG+ A RGYVYFTEV LP DMATIE+LW YS GKFGY VQ + V ++FE F +IGW + + R L EFIYD++KAP GHLPLTS LRG LLK LLT+ W
Sbjct: 5 AVAAMLSLAFAPGQVGRVATVPLRTRPALCATEAPEAPEAPEAPMVERPKIETTCGFDYVPLLTALQAGEFREADQLTRDALITLAGDKAVDRGYVYFTEVPNLPVEDMATIERLWQAYSGGKFGYAVQAQAYMSKKVNRNFETFFERIGWKKADGTLVRWLPEAKNDEFIYDVDKAPKGHLPLTSTLRGQQLLKGLLTHKAW 207 The following BLAST results are available for this feature:
BLAST of EWM29807.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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