EWM21773.1, cds8899 (CDS) Nannochloropsis gaditana

Overview
NameEWM21773.1
Unique Namecds8899
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:508839..510578 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21773.1
Productmate efflux family protein
Orig transcript idgnl|cribi|Naga_100188g10.2456.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:508839..510578 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0042221response to chemical
GO:0055085transmembrane transport
GO:0006855drug transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0015238drug transmembrane transporter activity
GO:0015297antiporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002528MATE
Homology
BLAST of EWM21773.1 vs. NCBI_GenBank
Match: gi|585102108|gb|EWM21773.1| (mate efflux family protein [Nannochloropsis gaditana])

HSP 1 Score: 1156.74 bits (2991), Expect = 0.000e+0
Identity = 579/579 (100.00%), Postives = 579/579 (100.00%), Query Frame = 0
Query:    1 MLLPRKHCHGISLLAFFLSFSTAFVFVRPATTSFCNPTHQSKPSSTVKANKTLPPLPQSSSSPRGPVRKNSPDPPFKWRGGAFAARIPGTKPNRVLAWLQTFAPGPDAPRKQKLDWDFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVASSEGADVGESEASKANALSRSVSTALLLAGVVGLLQGVVYVLCAAPIIRAMGVLPGSAMYDPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSLVFTVLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALFPLLLRVRQRARVRLNFADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLKAATLASASGTASIREVEEARGNLWHLIKRGCVLGAMVSGGLSVVTLCSKSTVMRGLTSDLSVQATALAVFPLVMACQVNKGLAYPVNGIIMGGLDWGFSTVTMWLANVICIGLLLLWSPHVGLSELWTALSVFMAIQWVSGVIRFASGTGVWKLLRERGGRQRAR 579
            MLLPRKHCHGISLLAFFLSFSTAFVFVRPATTSFCNPTHQSKPSSTVKANKTLPPLPQSSSSPRGPVRKNSPDPPFKWRGGAFAARIPGTKPNRVLAWLQTFAPGPDAPRKQKLDWDFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVASSEGADVGESEASKANALSRSVSTALLLAGVVGLLQGVVYVLCAAPIIRAMGVLPGSAMYDPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSLVFTVLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALFPLLLRVRQRARVRLNFADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLKAATLASASGTASIREVEEARGNLWHLIKRGCVLGAMVSGGLSVVTLCSKSTVMRGLTSDLSVQATALAVFPLVMACQVNKGLAYPVNGIIMGGLDWGFSTVTMWLANVICIGLLLLWSPHVGLSELWTALSVFMAIQWVSGVIRFASGTGVWKLLRERGGRQRAR
Sbjct:    1 MLLPRKHCHGISLLAFFLSFSTAFVFVRPATTSFCNPTHQSKPSSTVKANKTLPPLPQSSSSPRGPVRKNSPDPPFKWRGGAFAARIPGTKPNRVLAWLQTFAPGPDAPRKQKLDWDFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVASSEGADVGESEASKANALSRSVSTALLLAGVVGLLQGVVYVLCAAPIIRAMGVLPGSAMYDPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSLVFTVLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALFPLLLRVRQRARVRLNFADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLKAATLASASGTASIREVEEARGNLWHLIKRGCVLGAMVSGGLSVVTLCSKSTVMRGLTSDLSVQATALAVFPLVMACQVNKGLAYPVNGIIMGGLDWGFSTVTMWLANVICIGLLLLWSPHVGLSELWTALSVFMAIQWVSGVIRFASGTGVWKLLRERGGRQRAR 579          
BLAST of EWM21773.1 vs. NCBI_GenBank
Match: gi|397628143|gb|EJK68760.1| (hypothetical protein THAOC_10034 [Thalassiosira oceanica])

HSP 1 Score: 483.026 bits (1242), Expect = 3.407e-162
Identity = 270/477 (56.60%), Postives = 342/477 (71.70%), Query Frame = 0
Query:  104 PGPDAPRKQKLDWDFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVASSEG---ADVGE-SEASKANALSRSVSTALLLAGVVGLLQGVVYVLCAAPIIRAMGVLPGSAMYDPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSLVFTVLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALFPLLLRVRQRARVRL--NFADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLKAATLASASGTASIREVEEARGNLWHLIKRGCVLGAMVSGGLSVVTLCSKSTVMRGLTSDLSVQATALAVFPLVMACQVNKGLAYPVNGIIMGGLDWGFSTVTMWLANVICIGLLLLWSP--HVGLSELWTALSVFMAIQWVSGVIRFASGTGVWKLLRER 572
            PG +A +K+ L+ +F  IA PAF Q  AEPLAGLVDTAYLGRLGP  LGG GVAISAQY+VSKLYNDPLLRTSISLVAS +G      GE S+ SK  +LS +VS+ALLLA  VG +Q ++Y   A  I+R MGV P S M+  A SYLR+RALGTPAATLWLV+NG+FRGLGDT TPLK+S++FT LNA LDPL +F+   G SGAA GTAIAQY AL PL++ + ++  V +     DL  +L +Y++A S +F+RT GK+LAY+ CARQAALLG V AAAYNLTFQ+GFATTQLCES+A+AVQ+L+AREL    A       G   I    + R    HLI     +G +V+GGLS +T   K +V+RGLT+DLS++  + +VF  V+  QV KGLAYP NGI+MGGLDW F+ + MWLAN++C+G++  W+    V L ++W AL+ FM  Q V+ ++RF S TGVW+LLR  
Sbjct:   66 PGEEADQKRILNREFATIALPAFFQLAAEPLAGLVDTAYLGRLGPSVLGGAGVAISAQYAVSKLYNDPLLRTSISLVASQDGRSRQQGGEASDESKRKSLSIAVSSALLLAFTVGAIQLLLYFTFAGQILRGMGVGPDSPMHHSAYSYLRVRALGTPAATLWLVTNGVFRGLGDTSTPLKYSILFTCLNAVLDPLFIFSLKFGASGAAAGTAIAQYTALCPLMISLHRKVGVDVFGQLKDLGGTLKEYVKAGSYIFLRTIGKVLAYSVCARQAALLGSVAAAAYNLTFQLGFATTQLCESVAVAVQTLLAREL----ARGEDEVDGKEKIMAARKVR----HLINGSIFVGGLVAGGLSFITHLKKDSVLRGLTTDLSIREASGSVFSAVLVTQVLKGLAYPCNGIVMGGLDWKFTMLAMWLANIVCVGMVQTWARAGTVTLGKIWWALAAFMGTQVVTSILRFQSKTGVWRLLRSE 534          
BLAST of EWM21773.1 vs. NCBI_GenBank
Match: gi|1072228702|gb|OEU13437.1| (MATE efflux family protein, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 451.44 bits (1160), Expect = 4.466e-151
Identity = 255/472 (54.03%), Postives = 325/472 (68.86%), Query Frame = 0
Query:  113 KLDWDFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVASSEG-----------ADVGESEASKANALSRSVSTALLLAGVVGLLQGVVYVLCAAPIIRAMGVLPGSAMYDPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSLVFTVLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALFPLLLRVRQRARVRL--NFADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLKAATLASASGTASIREVEEARGNLWHLIKRGCVLGAMVSGGLSVVTLCSKSTVMRGLTSDLSVQATALAVFPLVMACQVNKGLAYPVNGIIMGGLDWGFSTVTMWLANVICIGLLLLWS--PHVGLSELWTALSVFMAIQWVSGVIRFASGTGVWKLL 569
            KL  +F  I  PAF+Q  AEPLA LVDTAYLGRLGP  LGG GVAISAQY+VSKLYNDPLLRTSISLVAS++G            DV     +    LS +VS+ALLLA  VG++Q  VY L A+ I R MG+   + MY  A SYLR+RALGTPAATLWLVSNGIFRGLGDT TPL +SL+FT LNA LDPL +FTFG G SGAA GTA+AQY+AL PL++ + ++  + +     +L  SL  Y++A  LV  RT  K+LAY+ CAR+AA LG V AAAYNLTFQ+GFATTQ+CE++A+AVQ+L+AREL      T + A     +R          HLI     +G  V+  LS+ T   + +++RGLTS+ +++  ++ +FP V+  Q+ KGLAYPVNGIIMGGLDW FS + MW AN+I +G++  WS    V L ++W AL+ FMA Q V+G+IR+ S TG+WK+L
Sbjct:    1 KLTREFFSIGFPAFIQLAAEPLAALVDTAYLGRLGPDVLGGAGVAISAQYAVSKLYNDPLLRTSISLVASTDGQARGGELDDKNVDVKSQAVNNEKKLSIAVSSALLLAFCVGVIQLFVYSLFASSITRGMGLSFQNPMYQSAFSYLRVRALGTPAATLWLVSNGIFRGLGDTRTPLIYSLIFTALNAILDPLFIFTFGFGASGAAAGTALAQYIALIPLMMALNRKVNIDIFGQLPELKSSLKAYIKAGGLVLFRTLAKVLAYSICARKAAGLGSVAAAAYNLTFQLGFATTQICEAVAVAVQTLLARELA--DNQTHSPAIKAKLVR----------HLINTSLFIGGTVATCLSLTTFLQRDSILRGLTSNTAIREASVVIFPAVLLTQIFKGLAYPVNGIIMGGLDWVFSMIAMWGANIISLGMIGFWSLGGTVTLEQIWLALAAFMATQVVTGIIRYESKTGIWKVL 460          
BLAST of EWM21773.1 vs. NCBI_GenBank
Match: gi|219116452|ref|XP_002179021.1| (hypothetical protein PHATRDRAFT_44888 [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409788|gb|EEC49719.1| hypothetical protein PHATRDRAFT_44888 [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 443.736 bits (1140), Expect = 8.508e-147
Identity = 256/472 (54.24%), Postives = 326/472 (69.07%), Query Frame = 0
Query:  111 KQKLDWDFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVASSEGADVGESEASKANA------LSRSVSTALLLAGVVGLLQGVVYVLCAAPIIRAMGVLPGSAMYDPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSLVFTVLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALFPLLLRVRQRARVRL--NFADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLKAATLASASGTASIREVEEARGNLW-HLIKRGCVLGAMVSGGLSVVTLCSKSTVMRGLTSDLSVQATALAVFPLVMACQVNKGLAYPVNGIIMGGLDWGFSTVTMWLANVICIGLLLLW---SPHVGLSELWTALSVFMAIQWVSGVIRFASGTGVWKLLR 570
            K KL  DF++I  PA +Q  AEPLA LVDTAYLGRLGP  LGG GVAISAQY+VSKLYNDPLLRTSISLVAS +G   G+  A++A+       LS +VS+ALLLA  VG++Q +VY +    I   MG+ P S M+  AVSYL++RA GTPAATLWLV+NGIFRGLGDT TPL +SL FT LNA LDPL +F F  G SGAA GTA+AQY AL PLL  + +R RV +      L  SL +YL+A SLV  R+ GK+LAY+ CARQAA+LG V AAAYNLTFQ+GFATTQ+CE++A+AVQ+ +AREL    +                + R  L  HLI     LG  V+  LS+ T   ++ ++  LT++ +VQA A  +FP+V+  QV KGLAYPVNGIIMGGLDW +S + MW+AN  C+GL+  +   S  V L+++W AL+ FM  Q V+G++R+ S TGVW++L+
Sbjct:   88 KNKLTRDFVQIGGPALIQLAAEPLAALVDTAYLGRLGPEVLGGAGVAISAQYAVSKLYNDPLLRTSISLVASQDGKARGKEAATQADTDKAAKELSVAVSSALLLAASVGIIQLLVYSIFCKAITGGMGLNPSSPMWHSAVSYLQVRAFGTPAATLWLVANGIFRGLGDTRTPLWYSLFFTALNAVLDPLFIFVFHWGASGAAAGTALAQYTALVPLLFALNRRVRVDILGQLGALGESLQKYLKAGSLVLFRSLGKVLAYSVCARQAAMLGSVSAAAYNLTFQLGFATTQICEAVAVAVQTTLARELADTDS-------------HPPKVRAQLIRHLISTSIWLGGGVATALSLSTFWRRNWILASLTTNPAVQAAAAGIFPVVLLTQVLKGLAYPVNGIIMGGLDWFYSMIVMWIANFACVGLVRYFVTTSGAVSLAQIWWALAAFMGTQVVAGIVRYESKTGVWQVLQ 546          
BLAST of EWM21773.1 vs. NCBI_GenBank
Match: gi|1210515841|dbj|GAX25364.1| (hypothetical protein FisN_5Lh461 [Fistulifera solaris])

HSP 1 Score: 420.624 bits (1080), Expect = 4.765e-139
Identity = 235/429 (54.78%), Postives = 303/429 (70.63%), Query Frame = 0
Query:  108 APRKQKLDWDFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVASSEGADVGESEASKANALSRSVSTALLLAGVVGLLQGVVYVLCAAPIIRAMGVLPGSAMYDPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSLVFTVLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALFPLLLRVRQRARVRL--NFADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLKAATLASASGTASIREVEEARGNLWHLIKRGCVLGAMVSGGLSVVTLCSKSTVMRGLTSDLSVQATALAVFPLVMACQVNKGLAYPVNGIIMGGLDWGFSTVTMWLANVICIGLLLLWSPH 534
            A  K++L  DFL+I  PA +Q  AEPLA +VDTAYLGRL P  LGG GVA+SAQY+VSKLYNDPLLRTSISLVA+S      E E       S +VS+ALLLAG VG++Q +V+ L A  I + MGV P S M+  AVSYL++RALGTPAATLWLV+NGIFRGLGDT TPL +SL+FT+LN   DP  +F  G G +GAA GTA+AQY+AL PL+L + ++  + +   FA L  SL QYL+A  LV  RT  K+LAY+ C+RQAALLG V AAAYNLTFQ+GFATTQ+CE++A+AVQ+L+AR+                 I + +  R  + HLI    + G +V+  LS+ T   ++ V++GLT++++VQ  ALAVFP V+  QV KGLAYPVNGI+MGGLDW FS   MW+ANV+C+G++ L + +
Sbjct:   60 AQEKKELTKDFLKIGVPALLQLAAEPLAAIVDTAYLGRLSPAILGGAGVAVSAQYAVSKLYNDPLLRTSISLVAASS-----EDENQ-----SLAVSSALLLAGSVGIIQMLVFFLFARAITQGMGVGPASPMWFSAVSYLQVRALGTPAATLWLVTNGIFRGLGDTRTPLIYSLLFTLLNVVFDPFFIFVAGWGAAGAAAGTALAQYIALVPLMLSLNRKVPINIVKQFAQLKTSLQQYLKAGGLVMFRTVAKVLAYSVCSRQAALLGTVPAAAYNLTFQLGFATTQICEAVAVAVQTLMARQ-----------------ISQKKPKRELVRHLINSSTIFGGVVATTLSLFTWFGRANVLKGLTTNIAVQQAALAVFPAVLLTQVLKGLAYPVNGILMGGLDWVFSMTAMWVANVVCVGMITLLAAN 461          
BLAST of EWM21773.1 vs. NCBI_GenBank
Match: gi|1210524346|dbj|GAX17075.1| (hypothetical protein FisN_5Hh461 [Fistulifera solaris])

HSP 1 Score: 420.239 bits (1079), Expect = 6.241e-139
Identity = 234/429 (54.55%), Postives = 303/429 (70.63%), Query Frame = 0
Query:  108 APRKQKLDWDFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVASSEGADVGESEASKANALSRSVSTALLLAGVVGLLQGVVYVLCAAPIIRAMGVLPGSAMYDPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSLVFTVLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALFPLLLRVRQRARVRL--NFADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLKAATLASASGTASIREVEEARGNLWHLIKRGCVLGAMVSGGLSVVTLCSKSTVMRGLTSDLSVQATALAVFPLVMACQVNKGLAYPVNGIIMGGLDWGFSTVTMWLANVICIGLLLLWSPH 534
            A  K++L  DFL+I  PA +Q  AEPLA +VDTAYLGRL P  LGG GVA+SAQY+VSKLYNDPLLRTSISLVA+S      E E       + +VS+ALLLAG VG++Q +V+ + A  I + MGV P S M+  AVSYL++RALGTPAATLWLV+NGIFRGLGDT TPL +SL+FT+LN   DP  +F  G G +GAA GTA+AQY+AL PL+L + ++  + +   FA L  SL QYLRA  LV  RT  K+LAY+ C+RQAALLG V AAAYNLTFQ+GFATTQ+CE++A+AVQ+L+AR+                 I + +  R  + HLI    + G +V+  LS+ T   ++ V++GLT++++VQ  ALAVFP V+  QV KGLAYPVNGI+MGGLDW FS   MW ANV+C+G++ L++ +
Sbjct:   58 AQEKKELTKDFLKIGVPALLQLAAEPLAAIVDTAYLGRLSPAVLGGAGVAVSAQYAVSKLYNDPLLRTSISLVAASS-----EDEDQ-----TLAVSSALLLAGSVGIIQMLVFFVFARAITQGMGVGPASPMWFSAVSYLQVRALGTPAATLWLVTNGIFRGLGDTRTPLIYSLLFTLLNVVFDPFFIFVAGWGAAGAAAGTALAQYIALVPLMLSLNRKVPINIVKQFAQLKTSLQQYLRAGGLVMFRTVAKVLAYSVCSRQAALLGTVPAAAYNLTFQLGFATTQICEAVAVAVQTLMARQ-----------------ISQKKPKRELVRHLINSSTIFGGVVATTLSLFTWFGRANVIKGLTTNVAVQQAALAVFPAVLLTQVLKGLAYPVNGILMGGLDWVFSMTAMWAANVVCVGMITLYAAN 459          
BLAST of EWM21773.1 vs. NCBI_GenBank
Match: gi|224006367|ref|XP_002292144.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220972663|gb|EED90995.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 381.333 bits (978), Expect = 8.480e-124
Identity = 226/418 (54.07%), Postives = 280/418 (66.99%), Query Frame = 0
Query:  107 DAPRKQKLDWDFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVASSEGADVGESEASKA-----------------NALSRSVSTALLLAGVVGLLQGVVYVLCAAPIIRAMGVLPGSAMYDPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSLVFTVLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALFPLLLRVRQRARVRL--NFADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLKAATLASASGTASIREVEEARGNLWHLIKRGCVLGAMVSGGLSVVTLCSKSTVMRGLTSDLSVQATALAVFPLVMACQVNKGLAYPVNGIIM 505
            D   + KL   F  IA PAF Q  AEPLAGLVDTAYLGRLGP  LGG GVAISAQY++SKLYNDPLLRTSISLVAS +G   G  E   A                  +LS +VS+ALLLA  VG +Q ++Y LCA+ I++ MGV P S+M+  A SYLR+RALGTPAATLWLV+NGIFRGLGDT TP K+SL+FT LNA LDP  +FT   G SGAA GTAIAQYVAL PLL  + ++  V +   + +L  +L +YLRA  LVF+RT GK+LAY+ CARQAALLG V AAAYNLTFQ+GFATTQ+CES+A+AVQ+L+ARE        +A  S     + V      L HLI     +G +V+G LS++T   K +V+R LT+D  ++A +  +FP V+  Q    L   V+ I+M
Sbjct:   39 DEASQIKLTKTFFAIALPAFFQLAAEPLAGLVDTAYLGRLGPEVLGGAGVAISAQYAMSKLYNDPLLRTSISLVASEDGKRGGSGEGDDATTTTTSSSPATTTQSASQSLSIAVSSALLLAFTVGAIQLILYFLCASSILQGMGVPPTSSMFHSAYSYLRVRALGTPAATLWLVTNGIFRGLGDTRTPFKYSLLFTGLNAILDPFFIFTCKQGASGAAAGTAIAQYVALVPLLYSLHRKVGVDVLGQWRELGGTLKEYLRAGGLVFLRTVGKVLAYSVCARQAALLGSVAAAAYNLTFQLGFATTQICESVAVAVQTLLARE--------IAGESNDKDEKAVTMRAKRLRHLINGSITVGGLVAGSLSLLTFFQKESVLRSLTTDAGIRAASRIIFPAVLVTQGEPCLLQVVSCIVM 448          
BLAST of EWM21773.1 vs. NCBI_GenBank
Match: gi|551638198|ref|XP_005821914.1| (hypothetical protein GUITHDRAFT_118868 [Guillardia theta CCMP2712] >gi|428165949|gb|EKX34934.1| hypothetical protein GUITHDRAFT_118868 [Guillardia theta CCMP2712])

HSP 1 Score: 367.466 bits (942), Expect = 7.039e-119
Identity = 205/416 (49.28%), Postives = 270/416 (64.90%), Query Frame = 0
Query:  104 PGP--DAPRKQKLDWDFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVASSEGADVGESEASKANALSRSVSTALLLAGVVGLLQGVVYVLCAAPIIRAMGVLPGSAMYDPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSLVFTVLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALFPLLLRVRQRARVRLNFADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLKAATLASASGTASIREVEEARGNLWHLIKRGCVLGAMVSGGLSVVTLCSKSTVMRGLTSDLSVQATALAVFPLVMACQVNKGLAYPVNGIIMGGLDWGFSTVTM 517
            PGP  D   K K+D +F+ IA PAF+QF +EPLA LV+T YLGRLG VALG  G+AISAQYSVSKLYNDPLLRTSISLV                  LS  VS ALLLA  +G++Q  V+ L +  II  MGV   + M+ PA+++L++++LG P  TLWLVSNGIFRGLGDT+TPLKW+ +FT+LNA LDP  +FT  +G  GAAMGT  AQY+A+ PLLL++ ++  ++ + + L  SL  YL + S VF+RT GK+L Y  C+R+AALLG V +AAYN+ FQ+G ATTQ+CESI++A QS++ARE            S    +R                           S+ T  ++  V++GLT+D SVQA A  + PLV+  QV+KG+AYPVNG+IMG +DW F + +M
Sbjct:   60 PGPLDDRETKSKIDKEFVSIAIPAFIQFASEPLASLVNTMYLGRLGAVALGAAGIAISAQYSVSKLYNDPLLRTSISLVE-----------------LSNRVSAALLLAFCIGIIQAAVFGLFSERIIELMGVSRSAEMFLPAIAFLKVKSLGAPGMTLWLVSNGIFRGLGDTVTPLKWASIFTLLNAVLDPFFIFTLNLGCPGAAMGTVAAQYIAVIPLLLKLHEKFHLQFSLSSLRSSLTSYLSSGSFVFIRTIGKVLTYFVCSREAALLGTVSSAAYNICFQLGTATTQICESISVASQSILARE------------STKDDVR---------------------------SLFTFLNQRHVLQGLTTDASVQAAAATIMPLVLWTQVSKGMAYPVNGMIMGAMDWKFLSASM 419          
BLAST of EWM21773.1 vs. NCBI_GenBank
Match: gi|922861248|gb|KOO29024.1| (DNA-damage-inducible protein f [Chrysochromulina sp. CCMP291])

HSP 1 Score: 365.925 bits (938), Expect = 3.296e-117
Identity = 246/497 (49.50%), Postives = 321/497 (64.59%), Query Frame = 0
Query:  104 PGPDAPRKQKLDWDFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVASSEGADVGESEASKANALSRSVSTALLLAGVVGLLQGVVYVLCAAPIIRAMGVLPGSAMYDPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSLVFTVLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALFPLLLRVRQRARVRLNFAD-------------------------LLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLKAATLASASGTASIREVEEARGNLWHLIKRGCVLGAMVSGGLSVVTLCSKSTVMRGLTSDLSVQATALAVFPLVMACQVNKGLAYPVNGIIMGGLDWGFSTVTMWLANVICIGLLLLWSPH----VGLSELWTALSVFMAIQWVSGVIRFASGTGVWKLLRE 571
            P   + + + +D  FL IAAPAF+QF+AEPLA LVDT YLGRLG  ALGG GVAI+AQYSVSKLYNDPLLRT+ISLVA+ +G    E    +ANA    VSTALLLA VVG++QG  + + A  ++R   V P SAMY  A++YLRI +LG PAATLWL +NGIFRGLGDT TPL  +L FT LNA  DPL +F  GMG +GAA GTA+AQ +AL PLLL ++++ +V  + A+                         LL  L  YL A SLVF+R+ GKI AY+ CAR+AA LG V + A+NL FQ+G ATTQ+ ES+AIA Q+L+ARELG      + + + TA  R++          + RG ++G  V+G LS++T      V+ GLT+   V+A A  V PLV+ACQ  KGLAYPV+G +MG LDW  S   MW A +  + L+ +WS      + L++LW+AL+V   +Q ++G+ R ASGTG W +LR 
Sbjct:    4 PAEGSQKIKDIDRQFLFIAAPAFLQFSAEPLARLVDTTYLGRLGKDALGGAGVAIAAQYSVSKLYNDPLLRTTISLVAAKDG----EGPTVRANA----VSTALLLALVVGVVQGAFFFVFARGVLRLSLVTPASAMYPSALAYLRICSLGAPAATLWLATNGIFRGLGDTTTPLACALAFTGLNAIFDPLLIFNCGMGAAGAAAGTAMAQTIALVPLLLALQRKLKVGYSGAERPAERVGVSGWPIVGLFVPPGGLPALLAGLRMYLSAGSLVFLRSIGKISAYSVCAREAARLGAVASGAHNLCFQLGVATTQIAESVAIATQTLLARELG---RTDVTAPARTAVARQI----------VSRGLLVGGAVAGTLSLLTFRYSREVVNGLTTIPEVRAAAYGVMPLVLACQALKGLAYPVSGALMGALDWRASAAAMWAAQLSAVSLVAIWSQRGARALSLNQLWSALAVLFVVQILAGLGRIASGTGPWVVLRR 479          
BLAST of EWM21773.1 vs. NCBI_GenBank
Match: gi|551545943|ref|XP_005760917.1| (hypothetical protein EMIHUDRAFT_249058 [Emiliania huxleyi CCMP1516] >gi|485609534|gb|EOD08488.1| hypothetical protein EMIHUDRAFT_249058 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 347.436 bits (890), Expect = 1.182e-109
Identity = 232/472 (49.15%), Postives = 301/472 (63.77%), Query Frame = 0
Query:  107 DAPRKQKLDWDFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVASSEGADVGESEASKANALSRSVSTALLLAGVVGLLQGVVYVLCAAPIIRAMGVLPGSAMYDPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSLVFTVLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALFPLLLRVRQR---------ARVRLNFADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLKAATLASASGTASIREVEEARGNLWHLIKRGCVLGAMVSGGLSVVTLCSKSTVMRGLTSDLSVQATALAVFPLVMACQVNKGLAYPVNGIIMGGLDWGFSTVTMWLANVICIGLLLLWSPHVGLSELWTALSVFMAIQWVSGVIRFASGTGVWKLL 569
            D   +++LD +F  IA PA  QF AEPLAGLVDTAYLGRLG  ALGG G+AI A ++ +KL+NDPLLRTSIS+VAS +GA     E S+  A    +S AL+LA  VGLLQ   + L A  ++ AMG   GS M   A+SYLR+RALG PAATLWL SNG+FRGLGDT TPL W+L+F++LNA LDPL +F  G+G +GAA GT +AQ +AL  LL  + +R              +   L PSL  Y RA  LVFVRT GK+ AY YC R AA LG V +AA+ L F +G   +QLCES+A+A Q+L+AR LG L A    +  G  +      AR + WH+I RG ++G  V+G L+ VT    + V+  LT+D+ V+ T  ++   V+ CQ+ KGLA+P NG++MGGLDWGF+T  +WL + +C+GL  L +P   L  +W   + FMA Q V  V R  S TG W  L
Sbjct:   46 DGEARRRLDVEFASIAVPALAQFAAEPLAGLVDTAYLGRLGATALGGAGIAIGAHFATAKLFNDPLLRTSISIVASGDGAARLGGEDSRDAA----ISAALVLALCVGLLQLAFFALFAPRMVSAMGAGVGSPMRPTALSYLRVRALGMPAATLWLCSNGVFRGLGDTRTPLVWALLFSLLNALLDPLFIFPLGLGAAGAAAGTGLAQSIALVGLLRALSRRTGVSVSPLSLLSLASLRRLAPSLRAYGRAGVLVFVRTVGKVWAYTYCTRLAASLGAVSSAAHLLCFNLGVVLSQLCESVAVATQTLLARALGSLDA---MAKDGEGAEEAKRAARRDAWHVIGRGVLVGGGVAGVLTAVTAFRPAAVVASLTTDVVVRETCASIMAPVLLCQLFKGLAFPANGVVMGGLDWGFATAGIWLGSALCVGLAHLRAPPT-LHSIWWGFAAFMASQTVLSVGRVLSRTGPWGRL 509          
The following BLAST results are available for this feature:
BLAST of EWM21773.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102108|gb|EWM21773.1|0.000e+0100.00mate efflux family protein [Nannochloropsis gadita... [more]
gi|397628143|gb|EJK68760.1|3.407e-16256.60hypothetical protein THAOC_10034 [Thalassiosira oc... [more]
gi|1072228702|gb|OEU13437.1|4.466e-15154.03MATE efflux family protein, partial [Fragilariopsi... [more]
gi|219116452|ref|XP_002179021.1|8.508e-14754.24hypothetical protein PHATRDRAFT_44888 [Phaeodactyl... [more]
gi|1210515841|dbj|GAX25364.1|4.765e-13954.78hypothetical protein FisN_5Lh461 [Fistulifera sola... [more]
gi|1210524346|dbj|GAX17075.1|6.241e-13954.55hypothetical protein FisN_5Hh461 [Fistulifera sola... [more]
gi|224006367|ref|XP_002292144.1|8.480e-12454.07predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|551638198|ref|XP_005821914.1|7.039e-11949.28hypothetical protein GUITHDRAFT_118868 [Guillardia... [more]
gi|922861248|gb|KOO29024.1|3.296e-11749.50DNA-damage-inducible protein f [Chrysochromulina s... [more]
gi|551545943|ref|XP_005760917.1|1.182e-10949.15hypothetical protein EMIHUDRAFT_249058 [Emiliania ... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8929rna8929Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications